Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os05t0312000-01
CDS Infomation	cds chromosome:IRGSP-1.0:5:14294833:14308824:-1 gene:Os05g0312000 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:Mediator 5_1 description:Hypothetical conserved gene. (Os05t0312000-01)
Sequence	ATGGCGGCCGCCACCGCCGCCGCCGCCGCCGAGCTGGAGCGGCGGGTGATGGCGGCGGTG AAGGCGTCCGCGGCGCGCGGCGACCCCCCGCTCCTGCAGGCCGCCGAGGCCGCGCGCTGC GCCCGGGAGGCCTCCTCCTCCATCTCCGTCGATGGCGGGGCCGGGGCCGCGCTCGCCGCG GCGCTGGTGTCCAACCTGTGCTTCGCGCACAACACGGGCGCGATGTGGAAGGTGCTGGAC CAGGCCATGGCGTCCCGCCTCGTCTCCCCGCTCCTCGCCCTCGCGCTGCTCACCCCGAGG GTGGTGCCCAACCGGCAGGCGCAGCCGGAGGCATACAGGCTCTACCTCGAGCTGCTCGGC CAGTACACGGTCGCCCCGGTCTGCACGGAGAGCGTGGAGACGAAGGCCATGTTAGTCAAA TCTATTGATGATGCTTTGCATCTTTCAGATAGCTATGGGTTTCAGAGAGTGGATTTTGGA CATACAGTTATTTTGTTTGTGTTAAGCGTTATCAAAATATTGACTGACTGTATATTGGAA GATTGTGGTTTGCCAACTATTGATGGTGATGGACATGACATTTCATATGCTATTGGAGCA GAAAAAAGTATGAACATAGATGGCAAGGGAAGCTCATTTGATAGGAAAGATGAGCACCGT GAATGTCTGAGGAGGAAGAACACAATTATGACTTTAGAAGTAGTTGAGAAGATCACTGCT AACAAAAATACTCAAGTTTTTCTCCGTCTAGTCTATCGTAACACACCTGAAAATTTCAAT ATTTTGCTCCAGAGGCTTCAGCTTATTGGTGCTCTGAAGTCAAAGAATTTTGGAACTGCA CATAATCTGCTAGGCAGCTTGATGATGAATATACGAAAAGTTGTTACTACAGGACATCAA TTACACAAAGGCAATCTATTGGGAAGTATTGTGAGTACAAAGCCTTGCAGTTCTGCTGCA CGCAGTGTCTTTGGCGCTGGAAAGAGCTCTTGTTGGATACCTTTTGACATGTTTATGGAG AACACAATGGACGGAAGACATCTTGATACCATATCATCAATTGAAGCTCTGACAGAACTT GCTAAGACACTTCAAGTTCTTAATCGAGCAACCTGGCAAGAAACCTTTCAAGCTCTGTGG ATTTCAGCTTTACGGCTTATACAACGAGATCGTGGCATTCCAGAAGGGCCATTTCCTCAT CTTCATTCTCGATTGTGCATGTTATTGGCTATTGTACCTCTGTCTATTGCTTCCATTCTT AAGGAAGAGTCTGACAAGATTGAAGGTGGAATGGTCTCTGTTAGAAGAGGAGAATTATTG TCTTCACTTCAAGTTCTAGGGCAATTTTTTGGTCTTCTTTCTCCTCCACCAGCAGTAGTG CAGTCAGCAAATATTGCAGCTAGGAAAGCATTAGTTGCTTTATCTGTTTTGAAGGATCGG AATGAGAGAGGTCACAATTATTCCAAAGATATCTCCTCTATTAAAGCAGCGGGAAATATG CTACATCTTATTGTGGAAGCTTGTATAGCAAGGAATTTAGTTGATACATCTGTTTATTTC TGGCCTAGCTATGTTGTTCCAGTTAAAGACGCATCTGCTGTTGAGGAATCCCCTTGGTCA GCCTTAATGGAAGGGTCACCCCTTATGGGCCTTAAGGATGCACTTATGGTTACACCTGCT TCGAGCCTAGCAGAGTTGGAGAAATTGCAACCTTTTGCAGTAAGTGGGTCAGATGAGGAA AAGTTGGCGGCGTCTAAGATTCTGTGTGGAGCATCCCTTCTTCGTGGCTGGAACATTCAG GAACATGTTATCCAAATGGTGCTTAAGTTGCTGTCTACATTGCTCCCCCTAGACTCTGGA TCAGATGGGTTCTATATACATCACATGCCTATGCTGCATGCTCTCATATCTGGGATTTCT TCAATTGATGTGGTTCATATTCTCTCTATGTATGGCTTGGTTCCAGAACTAGCTGCCATT CTAATGCCTTTATGCGAAATATTTGGATCATTACCTTCGTCTGACCATAGGAATTGTAGT TTTGAAGAGGCCTCTGTGTACTCCGTATTCTCATGTGCTTTCCTGTGTCTTCTTCGCTTG TGGAAATTTCATAGACCCCCTGTGGAGTATGCACTATCAAAACATGGAGTCTTTGTTTGC TCAGAGATCAGTTTGGATTTTCTCCTGCTACTACGAAACAGTCATTTTGCTTTGAATAGT CCGTATGATGTTAGCAGAAAGAGCATATTTCAACTAGATCCATCGTTTCAAAAACCGGTG TATATTGACTCATTTCCAAAGCTACGGGCATGGTACTTTCAGAATCAGGCTTGCATAGCC TCTACTCTTTCTAGTTCTTACAAAAGGAAAAGTATCCTTCAAGTAGCCAATAAGATACTG AAAATTGTCTGCCATAAAATGTCAAAAAGTGGCATCCCTCCTGTCAGTTCCCAATCAACA TCAAGTTCCAGTATGAGTGGTTCATCTCTAGGCACACAAGATGATGTCTCCCAAGGGCCG CCAGCTACTGCATGGGAAGTGCTGGAAGCTGTTCCTTTTGTGCTTGAGACTGTTTTAGCT GCCTGCGCACATGGGAGGCTTTCGTCTCGTGATTTGATTACAGGCTTGAGGAATCTTGCG GACTTCTTGCCTGCTTCAGTTGCTGTTATCGTCAGCTACTTTTCGGCAGAAATTACTCGT GGCTTATGGAAGCCAGTTATGCTGAATGGGACTGACTGGCCCAGTCCTGCTGCAACGCTT TTAGCAGTTGAGTCCGATATTGAGGAGGCTCTTGCATCCGCTGGTGTTCATATTAACATC TCTCCACGAATACGTCCACCAATCCCAATGCTTCCATTACCAATAGCAACTCTTATCAGC TTATCAATAACTGTTAAGATGGAGGAATTTAATCACTTACAAGGAATTATTGACAAAGGA GTGGAAATTTGTGCTACATCAAGTTCATGGCCTAGCATGGCAATCATAGGGGCATTCTGG GCACAAAAAGTTCGGCGGTGGCATGATTATATCATCCAGTCATGTTCAGAGACACCATTT ACCAGAGATAAAAATGCAGTTGCTCAACTAATCAGGAGTTGCTTCTCATCTTTCCTTGGG CCTTTGGTTGATGGGCGTTCTTGCTTTGTAGCTGACAGAGGAGTGAATAGGCTGCTGGGG CAGGCTCACCAAGAAAGAAGTCCCCGGTTTTCTTTATCGCCAGGATTACTTTACACACGA TGCTGCCGAATGTTTCCTGACAACTATTTTGTATGTGAAGAGATTTTGAAGGTTGTCATT GAGAGAGCTCGTGCATTAGCAAATGAATGTGACTCTAGTAGACCTCATCTTCTGAAGTCT GGTCGGATGACACTATCTTCTGCCACATGTTCTGTAGAGCAGATAGCATCACTTGCAGCA TCTATGCTTTGTCATGCTGGTGGAATAAAGTTGGTTCGTCTTCTGTATGAGCAGATTCTG CCAACAATGCTGCTTTCAGCTGGTGAAGCAAGGCTGGGTTCTGCTGGACCAGTGTGCAGT AGTTTCGAAGGATTTGCTTTGGCATATGTTCTCCTTGTTTCTGGGGCCAGCACCTGGGGA GTAGGAGAAACCTCCCCAGTTTATACTTCCGTATACACATCGAAGAGGCAACGGGTTGTA GATAGGCACTTGGAGTTTGTCGCCAATGTAATGCAGGGTAACATTGAGCTTGGCTGTGGC CAGGTCACTTGGAGAACCTATGTTATATGTTTTGTGGGCTTGCTGGTCGACTTTGCGCCA ACATGGATCCCTGAGGTGAAGCTCGAGACGCTGAAGAAGCTGGCGTCTGGGCTTTGGAAA TGGCACGAGTGCGATCTTGCCCTCTCTTTGCTCGAGCGAGGGGGTCCAAAGGCCATATCT ACAGTGGTTGAATACATCCTATGA

Peptide Sequence

PEP ID	Os05t0312000-01
PEP Infomation	pep chromosome:IRGSP-1.0:5:14294833:14308824:-1 gene:Os05g0312000 transcript:Os05t0312000-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:Mediator 5_1 description:Hypothetical conserved gene. (Os05t0312000-01)
Sequence	MAAATAAAAAELERRVMAAVKASAARGDPPLLQAAEAARCAREASSSISVDGGAGAALAA ALVSNLCFAHNTGAMWKVLDQAMASRLVSPLLALALLTPRVVPNRQAQPEAYRLYLELLG QYTVAPVCTESVETKAMLVKSIDDALHLSDSYGFQRVDFGHTVILFVLSVIKILTDCILE DCGLPTIDGDGHDISYAIGAEKSMNIDGKGSSFDRKDEHRECLRRKNTIMTLEVVEKITA NKNTQVFLRLVYRNTPENFNILLQRLQLIGALKSKNFGTAHNLLGSLMMNIRKVVTTGHQ LHKGNLLGSIVSTKPCSSAARSVFGAGKSSCWIPFDMFMENTMDGRHLDTISSIEALTEL AKTLQVLNRATWQETFQALWISALRLIQRDRGIPEGPFPHLHSRLCMLLAIVPLSIASIL KEESDKIEGGMVSVRRGELLSSLQVLGQFFGLLSPPPAVVQSANIAARKALVALSVLKDR NERGHNYSKDISSIKAAGNMLHLIVEACIARNLVDTSVYFWPSYVVPVKDASAVEESPWS ALMEGSPLMGLKDALMVTPASSLAELEKLQPFAVSGSDEEKLAASKILCGASLLRGWNIQ EHVIQMVLKLLSTLLPLDSGSDGFYIHHMPMLHALISGISSIDVVHILSMYGLVPELAAI LMPLCEIFGSLPSSDHRNCSFEEASVYSVFSCAFLCLLRLWKFHRPPVEYALSKHGVFVC SEISLDFLLLLRNSHFALNSPYDVSRKSIFQLDPSFQKPVYIDSFPKLRAWYFQNQACIA STLSSSYKRKSILQVANKILKIVCHKMSKSGIPPVSSQSTSSSSMSGSSLGTQDDVSQGP PATAWEVLEAVPFVLETVLAACAHGRLSSRDLITGLRNLADFLPASVAVIVSYFSAEITR GLWKPVMLNGTDWPSPAATLLAVESDIEEALASAGVHINISPRIRPPIPMLPLPIATLIS LSITVKMEEFNHLQGIIDKGVEICATSSSWPSMAIIGAFWAQKVRRWHDYIIQSCSETPF TRDKNAVAQLIRSCFSSFLGPLVDGRSCFVADRGVNRLLGQAHQERSPRFSLSPGLLYTR CCRMFPDNYFVCEEILKVVIERARALANECDSSRPHLLKSGRMTLSSATCSVEQIASLAA SMLCHAGGIKLVRLLYEQILPTMLLSAGEARLGSAGPVCSSFEGFALAYVLLVSGASTWG VGETSPVYTSVYTSKRQRVVDRHLEFVANVMQGNIELGCGQVTWRTYVICFVGLLVDFAP TWIPEVKLETLKKLASGLWKWHECDLALSLLERGGPKAISTVVEYIL

Transcript Sequence

Transcript ID	Os05t0312000-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:5:14294833:14308824:-1 gene:Os05g0312000 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:Mediator 5_1 description:Hypothetical conserved gene. (Os05t0312000-01)
Sequence	TCCGTTCCACCACGCTTTTCTCTGCTTCCTTCTCTTCTCTTCTCTTCTCTTCCCTTCTCC ATCGTTCCAAAACCACTCGCCCCGTAAAACCCCCTCAAACCTCCCTCCCGCGGCGGCGCA ATCGCGTTCATGGCGGCCGCCACCGCCGCCGCCGCCGCCGAGCTGGAGCGGCGGGTGATG GCGGCGGTGAAGGCGTCCGCGGCGCGCGGCGACCCCCCGCTCCTGCAGGCCGCCGAGGCC GCGCGCTGCGCCCGGGAGGCCTCCTCCTCCATCTCCGTCGATGGCGGGGCCGGGGCCGCG CTCGCCGCGGCGCTGGTGTCCAACCTGTGCTTCGCGCACAACACGGGCGCGATGTGGAAG GTGCTGGACCAGGCCATGGCGTCCCGCCTCGTCTCCCCGCTCCTCGCCCTCGCGCTGCTC ACCCCGAGGGTGGTGCCCAACCGGCAGGCGCAGCCGGAGGCATACAGGCTCTACCTCGAG CTGCTCGGCCAGTACACGGTCGCCCCGGTCTGCACGGAGAGCGTGGAGACGAAGGCCATG TTAGTCAAATCTATTGATGATGCTTTGCATCTTTCAGATAGCTATGGGTTTCAGAGAGTG GATTTTGGACATACAGTTATTTTGTTTGTGTTAAGCGTTATCAAAATATTGACTGACTGT ATATTGGAAGATTGTGGTTTGCCAACTATTGATGGTGATGGACATGACATTTCATATGCT ATTGGAGCAGAAAAAAGTATGAACATAGATGGCAAGGGAAGCTCATTTGATAGGAAAGAT GAGCACCGTGAATGTCTGAGGAGGAAGAACACAATTATGACTTTAGAAGTAGTTGAGAAG ATCACTGCTAACAAAAATACTCAAGTTTTTCTCCGTCTAGTCTATCGTAACACACCTGAA AATTTCAATATTTTGCTCCAGAGGCTTCAGCTTATTGGTGCTCTGAAGTCAAAGAATTTT GGAACTGCACATAATCTGCTAGGCAGCTTGATGATGAATATACGAAAAGTTGTTACTACA GGACATCAATTACACAAAGGCAATCTATTGGGAAGTATTGTGAGTACAAAGCCTTGCAGT TCTGCTGCACGCAGTGTCTTTGGCGCTGGAAAGAGCTCTTGTTGGATACCTTTTGACATG TTTATGGAGAACACAATGGACGGAAGACATCTTGATACCATATCATCAATTGAAGCTCTG ACAGAACTTGCTAAGACACTTCAAGTTCTTAATCGAGCAACCTGGCAAGAAACCTTTCAA GCTCTGTGGATTTCAGCTTTACGGCTTATACAACGAGATCGTGGCATTCCAGAAGGGCCA TTTCCTCATCTTCATTCTCGATTGTGCATGTTATTGGCTATTGTACCTCTGTCTATTGCT TCCATTCTTAAGGAAGAGTCTGACAAGATTGAAGGTGGAATGGTCTCTGTTAGAAGAGGA GAATTATTGTCTTCACTTCAAGTTCTAGGGCAATTTTTTGGTCTTCTTTCTCCTCCACCA GCAGTAGTGCAGTCAGCAAATATTGCAGCTAGGAAAGCATTAGTTGCTTTATCTGTTTTG AAGGATCGGAATGAGAGAGGTCACAATTATTCCAAAGATATCTCCTCTATTAAAGCAGCG GGAAATATGCTACATCTTATTGTGGAAGCTTGTATAGCAAGGAATTTAGTTGATACATCT GTTTATTTCTGGCCTAGCTATGTTGTTCCAGTTAAAGACGCATCTGCTGTTGAGGAATCC CCTTGGTCAGCCTTAATGGAAGGGTCACCCCTTATGGGCCTTAAGGATGCACTTATGGTT ACACCTGCTTCGAGCCTAGCAGAGTTGGAGAAATTGCAACCTTTTGCAGTAAGTGGGTCA GATGAGGAAAAGTTGGCGGCGTCTAAGATTCTGTGTGGAGCATCCCTTCTTCGTGGCTGG AACATTCAGGAACATGTTATCCAAATGGTGCTTAAGTTGCTGTCTACATTGCTCCCCCTA GACTCTGGATCAGATGGGTTCTATATACATCACATGCCTATGCTGCATGCTCTCATATCT GGGATTTCTTCAATTGATGTGGTTCATATTCTCTCTATGTATGGCTTGGTTCCAGAACTA GCTGCCATTCTAATGCCTTTATGCGAAATATTTGGATCATTACCTTCGTCTGACCATAGG AATTGTAGTTTTGAAGAGGCCTCTGTGTACTCCGTATTCTCATGTGCTTTCCTGTGTCTT CTTCGCTTGTGGAAATTTCATAGACCCCCTGTGGAGTATGCACTATCAAAACATGGAGTC TTTGTTTGCTCAGAGATCAGTTTGGATTTTCTCCTGCTACTACGAAACAGTCATTTTGCT TTGAATAGTCCGTATGATGTTAGCAGAAAGAGCATATTTCAACTAGATCCATCGTTTCAA AAACCGGTGTATATTGACTCATTTCCAAAGCTACGGGCATGGTACTTTCAGAATCAGGCT TGCATAGCCTCTACTCTTTCTAGTTCTTACAAAAGGAAAAGTATCCTTCAAGTAGCCAAT AAGATACTGAAAATTGTCTGCCATAAAATGTCAAAAAGTGGCATCCCTCCTGTCAGTTCC CAATCAACATCAAGTTCCAGTATGAGTGGTTCATCTCTAGGCACACAAGATGATGTCTCC CAAGGGCCGCCAGCTACTGCATGGGAAGTGCTGGAAGCTGTTCCTTTTGTGCTTGAGACT GTTTTAGCTGCCTGCGCACATGGGAGGCTTTCGTCTCGTGATTTGATTACAGGCTTGAGG AATCTTGCGGACTTCTTGCCTGCTTCAGTTGCTGTTATCGTCAGCTACTTTTCGGCAGAA ATTACTCGTGGCTTATGGAAGCCAGTTATGCTGAATGGGACTGACTGGCCCAGTCCTGCT GCAACGCTTTTAGCAGTTGAGTCCGATATTGAGGAGGCTCTTGCATCCGCTGGTGTTCAT ATTAACATCTCTCCACGAATACGTCCACCAATCCCAATGCTTCCATTACCAATAGCAACT CTTATCAGCTTATCAATAACTGTTAAGATGGAGGAATTTAATCACTTACAAGGAATTATT GACAAAGGAGTGGAAATTTGTGCTACATCAAGTTCATGGCCTAGCATGGCAATCATAGGG GCATTCTGGGCACAAAAAGTTCGGCGGTGGCATGATTATATCATCCAGTCATGTTCAGAG ACACCATTTACCAGAGATAAAAATGCAGTTGCTCAACTAATCAGGAGTTGCTTCTCATCT TTCCTTGGGCCTTTGGTTGATGGGCGTTCTTGCTTTGTAGCTGACAGAGGAGTGAATAGG CTGCTGGGGCAGGCTCACCAAGAAAGAAGTCCCCGGTTTTCTTTATCGCCAGGATTACTT TACACACGATGCTGCCGAATGTTTCCTGACAACTATTTTGTATGTGAAGAGATTTTGAAG GTTGTCATTGAGAGAGCTCGTGCATTAGCAAATGAATGTGACTCTAGTAGACCTCATCTT CTGAAGTCTGGTCGGATGACACTATCTTCTGCCACATGTTCTGTAGAGCAGATAGCATCA CTTGCAGCATCTATGCTTTGTCATGCTGGTGGAATAAAGTTGGTTCGTCTTCTGTATGAG CAGATTCTGCCAACAATGCTGCTTTCAGCTGGTGAAGCAAGGCTGGGTTCTGCTGGACCA GTGTGCAGTAGTTTCGAAGGATTTGCTTTGGCATATGTTCTCCTTGTTTCTGGGGCCAGC ACCTGGGGAGTAGGAGAAACCTCCCCAGTTTATACTTCCGTATACACATCGAAGAGGCAA CGGGTTGTAGATAGGCACTTGGAGTTTGTCGCCAATGTAATGCAGGGTAACATTGAGCTT GGCTGTGGCCAGGTCACTTGGAGAACCTATGTTATATGTTTTGTGGGCTTGCTGGTCGAC TTTGCGCCAACATGGATCCCTGAGGTGAAGCTCGAGACGCTGAAGAAGCTGGCGTCTGGG CTTTGGAAATGGCACGAGTGCGATCTTGCCCTCTCTTTGCTCGAGCGAGGGGGTCCAAAG GCCATATCTACAGTGGTTGAATACATCCTATGATATGCCCGTGCCAAATTGGTGCTCTAA TTTGCCATGTACTTATGCTCTCTTGCTCCAGTACAGGCATACACATCTTACACCTGATCT GACGTGCAGAGACCCCCATCAGAGAAGCATATGTTCTAGTAGATGGCTTGCTCTGAACTA GATAGAAGTCTATACTACAGAAAGGATATCCAGCAGTTAGGTGTTTACACTTTACAGTAC ATTTACAGGTCAGTTCTTATTCTGGTCTTGCTGATCACAGTGCATGTGTACATAATTCGT GGAATCTTCTCTTGGTCGCAATTTATATTCACAAATGTAATTCAAATGTCTTAGATAGGA TGACATGGTGTAAATGATCAAGCATAGCTGCCACTCCAATGACATGGTGTAAATGATCTT TCCGGCTCAATTGGAGATCAGATTATTTTTTTGGTTTTGCTCTTTCT