Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os05t0310800-01
CDS Infomation	cds chromosome:IRGSP-1.0:5:14181444:14186266:1 gene:Os05g0310800 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Coatomer delta subunit (Delta-coat protein) (Delta-COP). (Os05t0310800-01)
Sequence	ATGGTGGTTCTTGCTGCTTCCATCATTTCAAAGTCCGGGAAAGCACTTGTTTCAAGACAG TTTGTTGACATGTCTCGCATAAGGATTGAAGGATTACTTGCAGCTTTCCCCAAACTGGTT GGAACTGGGAAGCAGCACACTTATGTTGAGACTGAAAATGTTCGCTATGTTTATCAGCCA ATAGAAGGCCTGTACTTGCTACTTATCACAAACAAGCAGAGCAATATTCTTGAAGATCTG GACACCTTGAGGCTGCTCTCTAAGCTTGTGCCTGAATACTCCCCCTCTCTTGATGAGGAG GGTGTTTGTAAAACAGCATTTGAGCTTATATTTGCCTTCGATGAAGCCATCTCTCTTGGA AATAAGGAAAATGTAACAGTTCAACAAGTCAAACAATATTGCGAGATGGAGAGCCATGAA GAGAAGGCTCACAAGCTGATGATGCAAAGCAAAATCAATGAAACAAGGGACGTGATGAAG AAGAAAGCTAGTGAGCTTGATAAGATGAGGATGGAAAGAGGAAAACTTGACAAAGGAGGA TACTCATCAATATCTGGTCCCCGGGTAATCGAGAAAACATTCAATGACATGAGCATTACC GGTAGTGGATTTGGGAGTGGTTCTGGATTAGGTGGACTGGGCATGGATATGGACTCATTT GCTAGCAAGCCCAAAGGAGGCCGTCCATCTGCAGCTGCTACTGCTCCTGGTAAAGGTCTT GGTATGAAATTAGGCAAAACACAGAAGACGAATCAGTTCCTAGAGTCTTTGAAAGCTGAA GGAGAAGTCATTCTGGAGGATGTACAACCCAGCTCAGTTCAGTCAAGGGCATCGCCTCTT CCACCAAGTGATCCTGTCACAGTGACAATTGAAGAAAAACTCAATGTTACAGTTAAAAGA GATGGAGGTGTTAATAACTTTGATGTGCAAGGAACCCTTGCTCTTCAGGTCCTTAATGAT GCAGATGGGTTTATCCAGTTGCAGATTGAAAACCAAGATGTACCTGGACTTAGCTTCAAA ACACACCCCAATATCAACAAGGATCTGTTTAACAGTCAGCAAGTTGTGGGAGCAAAAGAT CCAAACAGGCCATTCCCAAGTGGTCAAAATGAAACTCCTCTGGTTAAATGGAGAATTCAG GGGATGGATGAGTCATCGTTACCTCTATCAGTCAACTGCTGGCCATCAGTATCTGGAAGT GAAACCTATGTCAACATTGAGTATGAAGCTGCTGAGATGTTTGACCTGCACAATGTTGTC ATCTCTATACCATTGCCTGCTCTCCGGGAGGCTCCAAGTGTTAGACAGATTGATGGAGAA TGGAAGTATGACTCGAGAAACTCCGTGTTGGAATGGTCCATTCTTCTTATCGATCAGTCG AACCGCAGTGGCTCCATGGAATTCGTTGTCCCCCCAGCTGATCCATCAACATTTTTCCCC ATATCTATTGGATTTTCCGCATCGAGTACATTCAGTGATTTGAAGGTTACTGGAATCCGT CCTCTGAAGGATGGTAACCCGCCAAAGTATTCGCAGAGGGCTCGTTTGGTGGCCGCTAAT TACCAAGTAGTTTAA

Peptide Sequence

PEP ID	Os05t0310800-01
PEP Infomation	pep chromosome:IRGSP-1.0:5:14181444:14186266:1 gene:Os05g0310800 transcript:Os05t0310800-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Coatomer delta subunit (Delta-coat protein) (Delta-COP). (Os05t0310800-01)
Sequence	MVVLAASIISKSGKALVSRQFVDMSRIRIEGLLAAFPKLVGTGKQHTYVETENVRYVYQP IEGLYLLLITNKQSNILEDLDTLRLLSKLVPEYSPSLDEEGVCKTAFELIFAFDEAISLG NKENVTVQQVKQYCEMESHEEKAHKLMMQSKINETRDVMKKKASELDKMRMERGKLDKGG YSSISGPRVIEKTFNDMSITGSGFGSGSGLGGLGMDMDSFASKPKGGRPSAAATAPGKGL GMKLGKTQKTNQFLESLKAEGEVILEDVQPSSVQSRASPLPPSDPVTVTIEEKLNVTVKR DGGVNNFDVQGTLALQVLNDADGFIQLQIENQDVPGLSFKTHPNINKDLFNSQQVVGAKD PNRPFPSGQNETPLVKWRIQGMDESSLPLSVNCWPSVSGSETYVNIEYEAAEMFDLHNVV ISIPLPALREAPSVRQIDGEWKYDSRNSVLEWSILLIDQSNRSGSMEFVVPPADPSTFFP ISIGFSASSTFSDLKVTGIRPLKDGNPPKYSQRARLVAANYQVV

Transcript Sequence

Transcript ID	Os05t0310800-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:5:14181444:14186266:1 gene:Os05g0310800 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Coatomer delta subunit (Delta-coat protein) (Delta-COP). (Os05t0310800-01)
Sequence	TCCCGCGGCTGCCTCCGGCGAGCGATCTCCCTGCGTCTCCTCGGTCTCCTCGCGAGCTCG CCGCCGGCCGCCTGAGCCGATCTCCATCCCGCGAGCAGCAGCGCCGGCGTCCCCGCTGCT TCTTCCGCCGCATCCTTCGCTCGCTCGCTGGCGCATAATTCCTGAATCCATTTTAAGTGC AGTAATTCTGAGTACCAAAAAAGCCCTCAAAATGGTGGTTCTTGCTGCTTCCATCATTTC AAAGTCCGGGAAAGCACTTGTTTCAAGACAGTTTGTTGACATGTCTCGCATAAGGATTGA AGGATTACTTGCAGCTTTCCCCAAACTGGTTGGAACTGGGAAGCAGCACACTTATGTTGA GACTGAAAATGTTCGCTATGTTTATCAGCCAATAGAAGGCCTGTACTTGCTACTTATCAC AAACAAGCAGAGCAATATTCTTGAAGATCTGGACACCTTGAGGCTGCTCTCTAAGCTTGT GCCTGAATACTCCCCCTCTCTTGATGAGGAGGGTGTTTGTAAAACAGCATTTGAGCTTAT ATTTGCCTTCGATGAAGCCATCTCTCTTGGAAATAAGGAAAATGTAACAGTTCAACAAGT CAAACAATATTGCGAGATGGAGAGCCATGAAGAGAAGGCTCACAAGCTGATGATGCAAAG CAAAATCAATGAAACAAGGGACGTGATGAAGAAGAAAGCTAGTGAGCTTGATAAGATGAG GATGGAAAGAGGAAAACTTGACAAAGGAGGATACTCATCAATATCTGGTCCCCGGGTAAT CGAGAAAACATTCAATGACATGAGCATTACCGGTAGTGGATTTGGGAGTGGTTCTGGATT AGGTGGACTGGGCATGGATATGGACTCATTTGCTAGCAAGCCCAAAGGAGGCCGTCCATC TGCAGCTGCTACTGCTCCTGGTAAAGGTCTTGGTATGAAATTAGGCAAAACACAGAAGAC GAATCAGTTCCTAGAGTCTTTGAAAGCTGAAGGAGAAGTCATTCTGGAGGATGTACAACC CAGCTCAGTTCAGTCAAGGGCATCGCCTCTTCCACCAAGTGATCCTGTCACAGTGACAAT TGAAGAAAAACTCAATGTTACAGTTAAAAGAGATGGAGGTGTTAATAACTTTGATGTGCA AGGAACCCTTGCTCTTCAGGTCCTTAATGATGCAGATGGGTTTATCCAGTTGCAGATTGA AAACCAAGATGTACCTGGACTTAGCTTCAAAACACACCCCAATATCAACAAGGATCTGTT TAACAGTCAGCAAGTTGTGGGAGCAAAAGATCCAAACAGGCCATTCCCAAGTGGTCAAAA TGAAACTCCTCTGGTTAAATGGAGAATTCAGGGGATGGATGAGTCATCGTTACCTCTATC AGTCAACTGCTGGCCATCAGTATCTGGAAGTGAAACCTATGTCAACATTGAGTATGAAGC TGCTGAGATGTTTGACCTGCACAATGTTGTCATCTCTATACCATTGCCTGCTCTCCGGGA GGCTCCAAGTGTTAGACAGATTGATGGAGAATGGAAGTATGACTCGAGAAACTCCGTGTT GGAATGGTCCATTCTTCTTATCGATCAGTCGAACCGCAGTGGCTCCATGGAATTCGTTGT CCCCCCAGCTGATCCATCAACATTTTTCCCCATATCTATTGGATTTTCCGCATCGAGTAC ATTCAGTGATTTGAAGGTTACTGGAATCCGTCCTCTGAAGGATGGTAACCCGCCAAAGTA TTCGCAGAGGGCTCGTTTGGTGGCCGCTAATTACCAAGTAGTTTAACCTAACAAGGGATG TTTGTTGCCTCACTTCAGTGACACATGTTTGCGGTATATGTTATCTTTCGGCGATGAGCT GTTGAGAAGTCATGACAAACAAGGATTGTTTTGTATTTACAGTGAATGTATTTTTCGCCT GTTTCATATGTAGTAACATTTTGCCCCAAATTGCTGATGATCTGTACTGCCACCCGAGAA ATAAACACATGTATTTTCCTTTGAAACC