Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os05t0304600-01
CDS Infomation	cds chromosome:IRGSP-1.0:5:13734777:13740470:1 gene:Os05g0304600 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:LIPOXYGENASE 7 description:Similar to Lipoxygenase (Fragment). (Os05t0304600-01);Similar to Lipoxygenase. (Os05t0304600-02)
Sequence	ATGCAAATGCCCTTCTGCCCGAAGCTCTGGAGCTCGGCGGCGCCGGCGCCGGTGCAGCCG GGGAGCGTGGTCATCAATGGCACGGTGGTCGTCGCCAACCACTTCGGCCTCTCGGCTCCC GGCAAGTCCACCACCCTCCGCCTCTTCAGCGGCACGGAGGTCGATCACGAGACGAGGAAG GGGAGGCTGAGCGCGGAGGCGGCGTTGAGGGGAGGGAAGAAGACGAGGCATGGGAAGGCG AGCACGACGATGTACCAGGTGACGTTCTTCGTCGACGGCGAGTTCGGGACGCCGGGCGCC GTGGCCGTCAAGAACGGGAACCGGAACGACCAGTTCTTCCTCCGGCACGTCCGGCTGGAC CTCGCCGAGGACCGGAGCATCCACTTCGACTGCAACTCCTGGGTCTACCCCTATAAGAAG ACCACCTCCGACCGCGTCTTCTTCATCAACACGAGCTACCTGCCAGATAAGACGCCAGAG GCGCTGCGGCTGTTACGGGAGGAGGAGCTCAGAAGCCTGAGAGGGAATGGGCGCGGGGAG AGGAAGGACTGGGAGCGCATCTATGACTTCGACTACTATAACGACCTCGGCAACCCTGAC AACGATGACCATGTCCGCCCCGTCCTCGGTGGCACCAAGACCCACCCCTACCCTCGCCGC TGCCGCACCGGCCGCCCCCTCAGCAAGACCGACGGGGTGACGGAGACGCGGAAGCACAAG CTGATAAACCTGGACTACTACATCCCGCCGGACGAGCGGTTCAGCCCGGGGAAGCTGGCG GAGGTGCTGGCGATGGGGGTGCAGGCGGTGACCCACTTCGTCATCCCGGAGGCCCGCTCC ATCTTCCACGGCGACGTCGTCAACTTCAAGTCCACGGAGCAGCTGCGCGCCGACCTCTAC GGCAAGCCGCCGCAGCCGGCGGCGGACGCCAGGGTCATGGACGAGCTCAAGTCCTCCGTG CCGTCGCACAAGACGTACAAGCAGGTTTCCAGGATTGTCAAGGACAACCCCGCCAAGTTC CCCACCCCTCAAGTCATCCACTATGACACTGAGGCGTGGAGGAGCGACGAGGAGTTCGCG AGGGAGATGCTGGCAGGGCTCAACCCGGTGGTGATCAAGCGGCTGGAGGTGTTTCCTCCA AACAAGAGCAAGATAACCACGGACGATATCATGACCCAGATTGGAGGTCTGACCATTCAA CAGGCGATGGAGCAGAAACGGATGTACATCCTGGACCACCACGACTACCTGATGCCATAC CTCCGGCGGATAAACACGGAGGGGGTGTGCGTGTACGCGTCGCGCACGCTGCTCTTCCTC AGGGACGACGGCGCCCTCCGGCCCGTCGCCATCGAGCTCAGCTTGCCCGACGGCGGCGTC GGCGGCAGCGAGATCAGCAGGGTGTTCCTCCCGGCGAGCCAGGGCACCGATGCGCACCTT TGGCACCTCGCCAAGACTCATGTCGCCGTCAACGATTCTGGGTACCATCAGCTCATCAGC CACTGGCTGTTCACGCACGCGACAGTGGAGCCGTTCATCATCGCGACGAGGAGGCAGCTG AGCGCGATGCACCCGATCCACAAGCTCCTGGACCCGCACTTCAAGGACAACATGCAGATC AACACCTTGGCCAGGAGCATACTGCTCAACGCCGGTGGCCTCCTGGAGAAGACCATGTAC CCGGGGAAGTACTCCATGGAGATGTCCTCCGATATCTATGCCCATTGGAGGTTCACCGAG CAGTCCCTGCCTAATGATCTCATCAAGAGGGGGATGGCGTCCAGGGACCCCAAGGCGCGC GGCGGCGTGTCCCTCCACATCGAGGACTACCCGTACGCCGTCGACGGCATCGACGTGTGG CTCGCCATCGAGGGCTGGGTGCGCAGCTACTGCGACCACTTCTACCACGCCGACGCGGCG GTGGCCGGCGACGCCGAGCTGCAGGCGTGGTGGGACGACGTCCGCCGCGTGGGCCACGGC GACCGGCAGGGCGACGCCGCGTGCTGGCTGGACCTCGACACCGTCGCGGGCCTCGTCGAG ACGCTGTCGACGCTCATCTGGACCGCGTCGGCGCTGCACGCCGCCGTCAACTTCGGCCAG TACGGCTACGCCGGGTACCCGCCGAACCGGCCGACGCGGTGCCGGCGGTTCGTGCCGCTC CCGGGGTCGCCGGAGATGGCGCAGCTGGAGGCCGACCCGGGCCGGTTCTTCCTGGAGACG GTGCCCGACCGGTTCACGGCGACGCTGGGGATCGCGCTGATCGAGGTGCTGTCCAACCAC ACCTCCGACGAGGTGTACCTCGGGCAGCGCGCGACGTCGACGTGGACGGACGACGGCGAG GTGCTGCTGCTGCTGGACAGGTTCCGCGACGAGCTCCGGCGGGTGGAGAAGAGGGTGGAG GAGAGGAACAAGGACCCCAGGCTCGTCAACCGGAGGGGCCCCGTGAGGGTGCCGTACACG CTGCTCTACCCGGACGCCGGCGACGTCGCCGGCAAGGAGAAGGGGATCACCGGGAGAGGG ATACCCAACAGCGTCTCCATCTGA

Peptide Sequence

PEP ID	Os05t0304600-01
PEP Infomation	pep chromosome:IRGSP-1.0:5:13734777:13740470:1 gene:Os05g0304600 transcript:Os05t0304600-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:LIPOXYGENASE 7 description:Similar to Lipoxygenase (Fragment). (Os05t0304600-01);Similar to Lipoxygenase. (Os05t0304600-02)
Sequence	MQMPFCPKLWSSAAPAPVQPGSVVINGTVVVANHFGLSAPGKSTTLRLFSGTEVDHETRK GRLSAEAALRGGKKTRHGKASTTMYQVTFFVDGEFGTPGAVAVKNGNRNDQFFLRHVRLD LAEDRSIHFDCNSWVYPYKKTTSDRVFFINTSYLPDKTPEALRLLREEELRSLRGNGRGE RKDWERIYDFDYYNDLGNPDNDDHVRPVLGGTKTHPYPRRCRTGRPLSKTDGVTETRKHK LINLDYYIPPDERFSPGKLAEVLAMGVQAVTHFVIPEARSIFHGDVVNFKSTEQLRADLY GKPPQPAADARVMDELKSSVPSHKTYKQVSRIVKDNPAKFPTPQVIHYDTEAWRSDEEFA REMLAGLNPVVIKRLEVFPPNKSKITTDDIMTQIGGLTIQQAMEQKRMYILDHHDYLMPY LRRINTEGVCVYASRTLLFLRDDGALRPVAIELSLPDGGVGGSEISRVFLPASQGTDAHL WHLAKTHVAVNDSGYHQLISHWLFTHATVEPFIIATRRQLSAMHPIHKLLDPHFKDNMQI NTLARSILLNAGGLLEKTMYPGKYSMEMSSDIYAHWRFTEQSLPNDLIKRGMASRDPKAR GGVSLHIEDYPYAVDGIDVWLAIEGWVRSYCDHFYHADAAVAGDAELQAWWDDVRRVGHG DRQGDAACWLDLDTVAGLVETLSTLIWTASALHAAVNFGQYGYAGYPPNRPTRCRRFVPL PGSPEMAQLEADPGRFFLETVPDRFTATLGIALIEVLSNHTSDEVYLGQRATSTWTDDGE VLLLLDRFRDELRRVEKRVEERNKDPRLVNRRGPVRVPYTLLYPDAGDVAGKEKGITGRG IPNSVSI

Transcript Sequence

Transcript ID	Os05t0304600-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:5:13734777:13740470:1 gene:Os05g0304600 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:LIPOXYGENASE 7 description:Similar to Lipoxygenase (Fragment). (Os05t0304600-01);Similar to Lipoxygenase. (Os05t0304600-02)
Sequence	ACACATTCTCTTCTCTCCCCTTTTTTTTTCCTCTCTGCTTTCTTTCTTCTAGCTTCCTTC TCCAACATTCCAAATGGTGATGCTCTGATGACCTCCTGGCTAGCTTCTACACACACTCCA AGAATCCTCTCCAGTGATGTAGTATATAAACCTCATGAGGGGCTAATCCCTTGTTTGCAT CAGGGGATCCATCTGAATAATTGATACTGGCTATTAAGTCAGTGATTATTTCTGTACTGT GCTATTACTGATCGATGCAAATGCCCTTCTGCCCGAAGCTCTGGAGCTCGGCGGCGCCGG CGCCGGTGCAGCCGGGGAGCGTGGTCATCAATGGCACGGTGGTCGTCGCCAACCACTTCG GCCTCTCGGCTCCCGGCAAGTCCACCACCCTCCGCCTCTTCAGCGGCACGGAGGTCGATC ACGAGACGAGGAAGGGGAGGCTGAGCGCGGAGGCGGCGTTGAGGGGAGGGAAGAAGACGA GGCATGGGAAGGCGAGCACGACGATGTACCAGGTGACGTTCTTCGTCGACGGCGAGTTCG GGACGCCGGGCGCCGTGGCCGTCAAGAACGGGAACCGGAACGACCAGTTCTTCCTCCGGC ACGTCCGGCTGGACCTCGCCGAGGACCGGAGCATCCACTTCGACTGCAACTCCTGGGTCT ACCCCTATAAGAAGACCACCTCCGACCGCGTCTTCTTCATCAACACGAGCTACCTGCCAG ATAAGACGCCAGAGGCGCTGCGGCTGTTACGGGAGGAGGAGCTCAGAAGCCTGAGAGGGA ATGGGCGCGGGGAGAGGAAGGACTGGGAGCGCATCTATGACTTCGACTACTATAACGACC TCGGCAACCCTGACAACGATGACCATGTCCGCCCCGTCCTCGGTGGCACCAAGACCCACC CCTACCCTCGCCGCTGCCGCACCGGCCGCCCCCTCAGCAAGACCGACGGGGTGACGGAGA CGCGGAAGCACAAGCTGATAAACCTGGACTACTACATCCCGCCGGACGAGCGGTTCAGCC CGGGGAAGCTGGCGGAGGTGCTGGCGATGGGGGTGCAGGCGGTGACCCACTTCGTCATCC CGGAGGCCCGCTCCATCTTCCACGGCGACGTCGTCAACTTCAAGTCCACGGAGCAGCTGC GCGCCGACCTCTACGGCAAGCCGCCGCAGCCGGCGGCGGACGCCAGGGTCATGGACGAGC TCAAGTCCTCCGTGCCGTCGCACAAGACGTACAAGCAGGTTTCCAGGATTGTCAAGGACA ACCCCGCCAAGTTCCCCACCCCTCAAGTCATCCACTATGACACTGAGGCGTGGAGGAGCG ACGAGGAGTTCGCGAGGGAGATGCTGGCAGGGCTCAACCCGGTGGTGATCAAGCGGCTGG AGGTGTTTCCTCCAAACAAGAGCAAGATAACCACGGACGATATCATGACCCAGATTGGAG GTCTGACCATTCAACAGGCGATGGAGCAGAAACGGATGTACATCCTGGACCACCACGACT ACCTGATGCCATACCTCCGGCGGATAAACACGGAGGGGGTGTGCGTGTACGCGTCGCGCA CGCTGCTCTTCCTCAGGGACGACGGCGCCCTCCGGCCCGTCGCCATCGAGCTCAGCTTGC CCGACGGCGGCGTCGGCGGCAGCGAGATCAGCAGGGTGTTCCTCCCGGCGAGCCAGGGCA CCGATGCGCACCTTTGGCACCTCGCCAAGACTCATGTCGCCGTCAACGATTCTGGGTACC ATCAGCTCATCAGCCACTGGCTGTTCACGCACGCGACAGTGGAGCCGTTCATCATCGCGA CGAGGAGGCAGCTGAGCGCGATGCACCCGATCCACAAGCTCCTGGACCCGCACTTCAAGG ACAACATGCAGATCAACACCTTGGCCAGGAGCATACTGCTCAACGCCGGTGGCCTCCTGG AGAAGACCATGTACCCGGGGAAGTACTCCATGGAGATGTCCTCCGATATCTATGCCCATT GGAGGTTCACCGAGCAGTCCCTGCCTAATGATCTCATCAAGAGGGGGATGGCGTCCAGGG ACCCCAAGGCGCGCGGCGGCGTGTCCCTCCACATCGAGGACTACCCGTACGCCGTCGACG GCATCGACGTGTGGCTCGCCATCGAGGGCTGGGTGCGCAGCTACTGCGACCACTTCTACC ACGCCGACGCGGCGGTGGCCGGCGACGCCGAGCTGCAGGCGTGGTGGGACGACGTCCGCC GCGTGGGCCACGGCGACCGGCAGGGCGACGCCGCGTGCTGGCTGGACCTCGACACCGTCG CGGGCCTCGTCGAGACGCTGTCGACGCTCATCTGGACCGCGTCGGCGCTGCACGCCGCCG TCAACTTCGGCCAGTACGGCTACGCCGGGTACCCGCCGAACCGGCCGACGCGGTGCCGGC GGTTCGTGCCGCTCCCGGGGTCGCCGGAGATGGCGCAGCTGGAGGCCGACCCGGGCCGGT TCTTCCTGGAGACGGTGCCCGACCGGTTCACGGCGACGCTGGGGATCGCGCTGATCGAGG TGCTGTCCAACCACACCTCCGACGAGGTGTACCTCGGGCAGCGCGCGACGTCGACGTGGA CGGACGACGGCGAGGTGCTGCTGCTGCTGGACAGGTTCCGCGACGAGCTCCGGCGGGTGG AGAAGAGGGTGGAGGAGAGGAACAAGGACCCCAGGCTCGTCAACCGGAGGGGCCCCGTGA GGGTGCCGTACACGCTGCTCTACCCGGACGCCGGCGACGTCGCCGGCAAGGAGAAGGGGA TCACCGGGAGAGGGATACCCAACAGCGTCTCCATCTGACACGATTCATCATCCTTCTTCT CTTATACTTCATCTATCCGACTCGACTCGACGCGTGTGGAATGTAAAGTTCTCTGCTTTT CTTTTTCTTTCTTTTCGTTTGAGAGTTTTGGTGTTGGGGATGTGAAATTGAGATTGATTG GTTGGTTTGGATTGGAGAATTGATGAGCAAACTGTGATGCAGAATTCAATACATGTAATT ATTGTTC