Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os05t0303000-01
CDS Infomation	cds chromosome:IRGSP-1.0:5:13623356:13627054:1 gene:Os05g0303000 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:HEAT SHOCK PROTEIN 70KD CHLOROPLAST PROTEIN 1 description:Similar to Chloroplast heat shock protein 70. (Os05t0303000-01)
Sequence	AAGAAGAACAATGAGACCATTCTTGTTTTTGACCTGGGAGGAGGCACATTTGATGTTTCA GTTCTTGAAGTTGGTGATGGTGTTTTTGAGGTGCTGTCTACATCTGGTGACACTCACCTT GGTGGTGATGACTTTGACAAGAGGGTTGTTGATTGGCTGGCGGGGAACTTCAAGAATGAT GAAGGTATTGACCTACTAAAAGACAAGCAGGCCTTGCAACGTCTTACAGAAGCAGCTGAG AAGGCAAAGATGGAGCTATCATCCTTGACCCAAACAAATATCAGTTTACCCTTCATTACA GCTACTGCTGATGGGCCCAAGCATATCGAGACAACTCTTACCAGGGCTAAATTTGAGGAG CTATGTTCAGATCTTCTTGACAGGTTGAGGACCCCTGTGGACAATGCCCTCAGAGATGCA AAGTTGTCATTTAAAGACATAGATGAGGTGATCCTTGTCGGTGGCTCCACCAGAATTCCA GCTGTGCAGGATCTTGTGAAGAAAATGACTGGAAAGGACCCCAATGTGACTGTCAACCCT GATGAGGTTGTTGCACTTGGAGCAGCTGTTCAGGCAGGAGTGTTGTCTGGTGATGTGAGC GACATTGTTCTTCTTGATGTAACACCACTTTCTCTGGGTTTGGAGACACTGGGTGGTGTG ATGACCAAGATTATCCCAAGGAACACAACTTTGCCCACCTCCAAGTCAGAGGTCTTCTCA ACCGCTGCTGATGGCCAGACTAGCGTGGAGATCAATGTCCTCCAAGGAGAGAGAGAGTTT GTCAGGGACAACAAATCTCTTGGTAGCTTTCGGCTTGATGGAATTCCTCCTGCCCCACGG GGTGTTCCACAAATCGAAGTTAAGTTTGACATCGATGCCAATGGCATCCTTTCTGTCAGC GCCGTAGACAAGGGTACTGGAAAGAAGCAGGACATTACGATAACTGGTGCCAGCACATTG CCGAAGGATGAGGTGGAGAAGATGGTTGAAGAAGCAGAGAAGTTTGCCAAGGAGGACAAA GAGAAGAGGGACGCAATCGACACCAAGAACCAGGCAGAGTCTGTCATCTACCAGACTGAG AAACAATTGAAGGAGCTCGGTGACAAGGTCCCAGGCGATGTGAAGGGTAAGGTTGAGGCG AAGCTGACGGAGCTCAAGGACGCTGTTGCAGGTGGCTCGACACAGACGATGAAGGATGCT CTCGCTGCTCTGAACCAGGAAGTGATGCAGCTGGGGCAGGCCCTCTACAGCCAGCAGGGT GCCCCAGGAGCAGGACCTACCCCAGGAGCTGATGCTGCCGCTGGCTCTGCTGGCCCATCC GAGAAGCCAGGAGGCGAGGAAGGTGATGTCATCGATGCTGATTTTACAGACAGCCAATGA

Peptide Sequence

PEP ID	Os05t0303000-01
PEP Infomation	pep chromosome:IRGSP-1.0:5:13623356:13627054:1 gene:Os05g0303000 transcript:Os05t0303000-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:HEAT SHOCK PROTEIN 70KD CHLOROPLAST PROTEIN 1 description:Similar to Chloroplast heat shock protein 70. (Os05t0303000-01)
Sequence	KKNNETILVFDLGGGTFDVSVLEVGDGVFEVLSTSGDTHLGGDDFDKRVVDWLAGNFKND EGIDLLKDKQALQRLTEAAEKAKMELSSLTQTNISLPFITATADGPKHIETTLTRAKFEE LCSDLLDRLRTPVDNALRDAKLSFKDIDEVILVGGSTRIPAVQDLVKKMTGKDPNVTVNP DEVVALGAAVQAGVLSGDVSDIVLLDVTPLSLGLETLGGVMTKIIPRNTTLPTSKSEVFS TAADGQTSVEINVLQGEREFVRDNKSLGSFRLDGIPPAPRGVPQIEVKFDIDANGILSVS AVDKGTGKKQDITITGASTLPKDEVEKMVEEAEKFAKEDKEKRDAIDTKNQAESVIYQTE KQLKELGDKVPGDVKGKVEAKLTELKDAVAGGSTQTMKDALAALNQEVMQLGQALYSQQG APGAGPTPGADAAAGSAGPSEKPGGEEGDVIDADFTDSQ

Transcript Sequence

Transcript ID	Os05t0303000-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:5:13623356:13627054:1 gene:Os05g0303000 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:HEAT SHOCK PROTEIN 70KD CHLOROPLAST PROTEIN 1 description:Similar to Chloroplast heat shock protein 70. (Os05t0303000-01)
Sequence	AAAAGAAGAACAATGAGACCATTCTTGTTTTTGACCTGGGAGGAGGCACATTTGATGTTT CAGTTCTTGAAGTTGGTGATGGTGTTTTTGAGGTGCTGTCTACATCTGGTGACACTCACC TTGGTGGTGATGACTTTGACAAGAGGGTTGTTGATTGGCTGGCGGGGAACTTCAAGAATG ATGAAGGTATTGACCTACTAAAAGACAAGCAGGCCTTGCAACGTCTTACAGAAGCAGCTG AGAAGGCAAAGATGGAGCTATCATCCTTGACCCAAACAAATATCAGTTTACCCTTCATTA CAGCTACTGCTGATGGGCCCAAGCATATCGAGACAACTCTTACCAGGGCTAAATTTGAGG AGCTATGTTCAGATCTTCTTGACAGGTTGAGGACCCCTGTGGACAATGCCCTCAGAGATG CAAAGTTGTCATTTAAAGACATAGATGAGGTGATCCTTGTCGGTGGCTCCACCAGAATTC CAGCTGTGCAGGATCTTGTGAAGAAAATGACTGGAAAGGACCCCAATGTGACTGTCAACC CTGATGAGGTTGTTGCACTTGGAGCAGCTGTTCAGGCAGGAGTGTTGTCTGGTGATGTGA GCGACATTGTTCTTCTTGATGTAACACCACTTTCTCTGGGTTTGGAGACACTGGGTGGTG TGATGACCAAGATTATCCCAAGGAACACAACTTTGCCCACCTCCAAGTCAGAGGTCTTCT CAACCGCTGCTGATGGCCAGACTAGCGTGGAGATCAATGTCCTCCAAGGAGAGAGAGAGT TTGTCAGGGACAACAAATCTCTTGGTAGCTTTCGGCTTGATGGAATTCCTCCTGCCCCAC GGGGTGTTCCACAAATCGAAGTTAAGTTTGACATCGATGCCAATGGCATCCTTTCTGTCA GCGCCGTAGACAAGGGTACTGGAAAGAAGCAGGACATTACGATAACTGGTGCCAGCACAT TGCCGAAGGATGAGGTGGAGAAGATGGTTGAAGAAGCAGAGAAGTTTGCCAAGGAGGACA AAGAGAAGAGGGACGCAATCGACACCAAGAACCAGGCAGAGTCTGTCATCTACCAGACTG AGAAACAATTGAAGGAGCTCGGTGACAAGGTCCCAGGCGATGTGAAGGGTAAGGTTGAGG CGAAGCTGACGGAGCTCAAGGACGCTGTTGCAGGTGGCTCGACACAGACGATGAAGGATG CTCTCGCTGCTCTGAACCAGGAAGTGATGCAGCTGGGGCAGGCCCTCTACAGCCAGCAGG GTGCCCCAGGAGCAGGACCTACCCCAGGAGCTGATGCTGCCGCTGGCTCTGCTGGCCCAT CCGAGAAGCCAGGAGGCGAGGAAGGTGATGTCATCGATGCTGATTTTACAGACAGCCAAT GAGCAGGAGAGTAGTTAGGTCCGAAATTTTAAGGAACGTTTCGCGACGAGTTTGAAATTT GTTCCACAAGATTGTAGGATCTGGGGTGTATCTTTTTGTTAGATGGGCACCTTTGCTTCC TATTTGTGGAGTTTTGGGCGGCGGAGTTTTTGAGTTCTGGGAATTTCACTTCCAAATAGA TGATGCTTTCGTTGCTCATAC