Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os05t0301600-01
CDS Infomation

cds chromosome:IRGSP-1.0:5:13536337:13541072:1 gene:Os05g0301600 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein phosphatase inhibitor 2 (IPP-2) family protein. (Os05t0301600-01)
Sequence

ATGAGCTCTCGTCGTGTGAAGTGGAATGAAGACAACCTGTATGAGATTGAATCAAATAAA
CCTGTTAGGCAGAAGATAACTGAGCCTAAGACACCATATCACCCTATGGTAGATGATGAT
GGGTCATTGTCACCAACGCGTCCTTTTGACAAGTGTCTGGATGAGACTGTTAATGCTGAA
GCTATTTTAACTGCTTTAAATGGTGTGGCTTCTTCAAGCAAAACTGATCCAAAGGATGAT
GGTTGGGCATCCTCAGATGATGATGCAGATGCCATGGAACAAGATGATGATCCAGAAGCT
GAAAAGTCAAGACTGAGTTTCAAGGAACATCGTCGTGCTCACTATGATGAATTCCTCAAG
GTGAAGGAGCTGATGCGCTCCGGATCGCTGATTGACGATGAGGCTGATGAGGATGATAGA
GGTGCAAAAGGCAGCCAAGCCAAAGCTGTAGGAAAGAAGCCAGCAGGCTGTGACAGCACA
CCCCCACCGCAAACATGA

Peptide Sequence

PEP ID

Os05t0301600-01
PEP Infomation

pep chromosome:IRGSP-1.0:5:13536337:13541072:1 gene:Os05g0301600 transcript:Os05t0301600-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein phosphatase inhibitor 2 (IPP-2) family protein. (Os05t0301600-01)
Sequence

MSSRRVKWNEDNLYEIESNKPVRQKITEPKTPYHPMVDDDGSLSPTRPFDKCLDETVNAE
AILTALNGVASSSKTDPKDDGWASSDDDADAMEQDDDPEAEKSRLSFKEHRRAHYDEFLK
VKELMRSGSLIDDEADEDDRGAKGSQAKAVGKKPAGCDSTPPPQT

Transcript Sequence

Transcript ID

Os05t0301600-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:5:13536337:13541072:1 gene:Os05g0301600 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein phosphatase inhibitor 2 (IPP-2) family protein. (Os05t0301600-01)
Sequence

GTTTCTGACCAATCCCCTCTGCTCTCTCCTCTCCTCTCTCCCTCTCCCGCGATCTGCAGA
GCCGCTTGTGCCCCCGCGCCGCCTTCCCCCCCCCCCCCCCCCTCCCCCCGCCGTCGCCGG
AGGCCTCCGTCGTGCGCGCGGCCGGCGAGGCCGCTCGAGTCGAACCGGAAGCTTTCGTGA
GTGAGGATTTCTCAAACTTCATTTATTTTCCATCACTGGGAGGTGTTGAAGCTTAATCAT
GAGCTCTCGTCGTGTGAAGTGGAATGAAGACAACCTGTATGAGATTGAATCAAATAAACC
TGTTAGGCAGAAGATAACTGAGCCTAAGACACCATATCACCCTATGGTAGATGATGATGG
GTCATTGTCACCAACGCGTCCTTTTGACAAGTGTCTGGATGAGACTGTTAATGCTGAAGC
TATTTTAACTGCTTTAAATGGTGTGGCTTCTTCAAGCAAAACTGATCCAAAGGATGATGG
TTGGGCATCCTCAGATGATGATGCAGATGCCATGGAACAAGATGATGATCCAGAAGCTGA
AAAGTCAAGACTGAGTTTCAAGGAACATCGTCGTGCTCACTATGATGAATTCCTCAAGGT
GAAGGAGCTGATGCGCTCCGGATCGCTGATTGACGATGAGGCTGATGAGGATGATAGAGG
TGCAAAAGGCAGCCAAGCCAAAGCTGTAGGAAAGAAGCCAGCAGGCTGTGACAGCACACC
CCCACCGCAAACATGAAGCAATGAAGTTACCGTTCCTTTTTCCCTGTTGTTTGCTAAGCT
AGGAAAAGCTCAACATAGCAGAAGCATGTGGTTTGTCTAAATTGTGTGAAGCATGCTTTG
CCTGTGTGTTAGATCCTTGTATTCAAAATCAGATGTGCATCCTGTAAACGACGCATGCCA
TTCATCTTCCCTTTGTGTTTAAGATCTTGATGTACCTAGAATGGCTTTGATTTAGTTTGA
GTTGCCTAGCTACATTTACTTGCTGAACGGTGAGCTCCTTTGCATGTTCATTTGAGACTA
TTTATCAAGAGCTGATACTCAAACCACATATTGGATAAGGCCAGATATGGCAAGATATGG
CCTTGATTTGTTTCACGC