Gene sequences

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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os05t0295100-02
CDS Infomation	cds chromosome:IRGSP-1.0:5:13027593:13046685:1 gene:Os05g0295100 gene_biotype:protein_coding transcript_biotype:protein_coding description:Hypothetical conserved gene. (Os05t0295100-01);Protein of unknown function DUF1253 family protein. (Os05t0295100-02)
Sequence	ATGGGGAAGCCCAAGCCCGCCTCCGCCACAGCCGCTCCTCGAGGGCACAAGAGGCGCCCG AAGAGGACAAGGCCCTCGGGGAAGGGAGGAGGACCCGAGCCGCGCGAGGAGAAGCGCAAG AGGCGAGAGCTCGATGGTGTCGGCCTGGCGGAGGAGTCGCCGCCGCCGGGTTCCAGCCTA GGCAAAATCTTAAGTACCGAATCTGGAGCAATAGGCCTAGAGCAGAGTGATGAAGATGAC ATGGAAGATGAACACACTGTTCCTGGTGACGATGAGACAAATGATATGATAAACAATAAA GATGATGCTTTTGATGAAATGGAGGCTTCATGTTCATTTCATCGCCATGTTAGTCGCATC ATAACGAATGAAGAAGTCAATGCATTACTAAAGCAGAAGTGTAAATTTAAATGGGAGGTG CCTGCAGAGGACATTCCAAAATCCAAATGGGTTGGAACAGGTGAAAAAATGGAGGGAGCT TATGTTGATCTTATTGGTGGTGTCAAAGGAAAGTTGAGGGATCATTGGCAGAATACCCTC TCTGATCAGTTGAATTCTAGATTGAATTTCTTCTCACTTTGTAGTAGCTATCGTGACATA ATGCATTGTAATAAGAAGCCATTTTATCTAAAAGGAGGTAGCACTGTGGATTCCAGTACA ATGGACTCCTATCTTATGCATGCTTTGAATCATATTAACAGAACGAGAGAGATTGTTGTA AAAAATGATGCGAAGCTTAGGAGTGACCCTAGCAAAGATATTTTGGATGATAACTCATTC CTCGATCAGGGCTTTACACGTCCAAAGGTTCTTTTCCTGTTACCTCTAAAAAGCATTGCG AGGCGTGTTGTGAAGAGGTTGATCCAACTGTCCCCACTGTCACAAAAGGATATCATTGCA AAATTCGAAGGGAAGTTTGGCGAATCAGATGATGAAGTAGAGGAGCCTGTTCAAAGTAAT AAACCTGCAGACTTTGACCTACTGTTTGCTGGAGATACTGATGATGAGTTCCTTTTTGGG ATAAAATATACAAAAAAATCTATGAATCTGTTCAGCAACTTCTACTCATCTGATATCATT GTTGCATCTCCTTTGGCACTTATAAAGAAAATCAATGGAGTTGATGACAACGGAAAGGAA CCTGCCAAGGAAAGGGATTTTGATTTCCTATCATCAATTGAAATAGTGGTGGTTGATCAC GCAGATGTGATTCTTATGCAGAGTTGGTCACATCTGTATGCTGTGTTTGAACAATTAAAT CAGTTGCCATCAAAGGAACATGGAACCAATGTGATGCGTATTAGGCCATGGTACTTGGAT CAGCATGCACGTTACTATCGGCAAACAATACTCTTGAGCTCTTATCTTACTCCAGAGATG AATGCTTTATTCAATGGATTATGCTTGAATTATGAGGGGAAGGTTAAGCTGGTGACTGAA TTTAAAGGTGTTCTTTCTAAAATACAGTTTGAAGCACCGCAGGTGTATGAAAGGTTTGAT GCATCTTCTATTACTGAAGTTGATGATGCTCGCTTTGATCATTTCTGCAAGAAGGTGTAC CCAAAGATTCAGGAGTCAGATGAGGGTCGGGTGTTGCTATTCGTCAGTTCATACTTTGAA TATATTAGGATAAGAAACTTCTTAAAATCTCAGGAAGCATCGTTTTGTAGAATTGGGGAG ACAACATCGCAACAAGATATATCACGTGCAAGACTCTGGTTTTTTGAGGGCAAGAAAAAA ATCTTACTTTATAGTGAGAGATCTCATTTCTACCACAGATACAAGATCAGGGGAGCACAC CATTTGATTATCTACTCTTTGCCAGGGAGAAAGGAATTTTACCCAGAGCTTGTAAACATG CTCAGTGAATCAGAAAACAGGAAATGCACCGTCTTTTTTTCACGTCTGGATCTTCTGAAG TTAGAACGAATTGTTGGGACGTTTGCTGCACAAAGGTTGGTTTCTTCAGATAAGAGCATT TTCGTGTTCCGCTGA

Peptide Sequence

PEP ID	Os05t0295100-02
PEP Infomation	pep chromosome:IRGSP-1.0:5:13027593:13046685:1 gene:Os05g0295100 transcript:Os05t0295100-02 gene_biotype:protein_coding transcript_biotype:protein_coding description:Hypothetical conserved gene. (Os05t0295100-01);Protein of unknown function DUF1253 family protein. (Os05t0295100-02)
Sequence	MGKPKPASATAAPRGHKRRPKRTRPSGKGGGPEPREEKRKRRELDGVGLAEESPPPGSSL GKILSTESGAIGLEQSDEDDMEDEHTVPGDDETNDMINNKDDAFDEMEASCSFHRHVSRI ITNEEVNALLKQKCKFKWEVPAEDIPKSKWVGTGEKMEGAYVDLIGGVKGKLRDHWQNTL SDQLNSRLNFFSLCSSYRDIMHCNKKPFYLKGGSTVDSSTMDSYLMHALNHINRTREIVV KNDAKLRSDPSKDILDDNSFLDQGFTRPKVLFLLPLKSIARRVVKRLIQLSPLSQKDIIA KFEGKFGESDDEVEEPVQSNKPADFDLLFAGDTDDEFLFGIKYTKKSMNLFSNFYSSDII VASPLALIKKINGVDDNGKEPAKERDFDFLSSIEIVVVDHADVILMQSWSHLYAVFEQLN QLPSKEHGTNVMRIRPWYLDQHARYYRQTILLSSYLTPEMNALFNGLCLNYEGKVKLVTE FKGVLSKIQFEAPQVYERFDASSITEVDDARFDHFCKKVYPKIQESDEGRVLLFVSSYFE YIRIRNFLKSQEASFCRIGETTSQQDISRARLWFFEGKKKILLYSERSHFYHRYKIRGAH HLIIYSLPGRKEFYPELVNMLSESENRKCTVFFSRLDLLKLERIVGTFAAQRLVSSDKSI FVFR

Transcript Sequence

Transcript ID	Os05t0295100-02
Transcript Infomation	cdna chromosome:IRGSP-1.0:5:13027593:13046685:1 gene:Os05g0295100 gene_biotype:protein_coding transcript_biotype:protein_coding description:Hypothetical conserved gene. (Os05t0295100-01);Protein of unknown function DUF1253 family protein. (Os05t0295100-02)
Sequence	GCGGTTGTTCCCCAGCTATACCGCCTCTGACTCTGAGGAAGGGGCGCAGCACCACCGCCC GATGGGGAAGCCCAAGCCCGCCTCCGCCACAGCCGCTCCTCGAGGGCACAAGAGGCGCCC GAAGAGGACAAGGCCCTCGGGGAAGGGAGGAGGACCCGAGCCGCGCGAGGAGAAGCGCAA GAGGCGAGAGCTCGATGGTGTCGGCCTGGCGGAGGAGTCGCCGCCGCCGGGTTCCAGCCT AGGCAAAATCTTAAGTACCGAATCTGGAGCAATAGGCCTAGAGCAGAGTGATGAAGATGA CATGGAAGATGAACACACTGTTCCTGGTGACGATGAGACAAATGATATGATAAACAATAA AGATGATGCTTTTGATGAAATGGAGGCTTCATGTTCATTTCATCGCCATGTTAGTCGCAT CATAACGAATGAAGAAGTCAATGCATTACTAAAGCAGAAGTGTAAATTTAAATGGGAGGT GCCTGCAGAGGACATTCCAAAATCCAAATGGGTTGGAACAGGTGAAAAAATGGAGGGAGC TTATGTTGATCTTATTGGTGGTGTCAAAGGAAAGTTGAGGGATCATTGGCAGAATACCCT CTCTGATCAGTTGAATTCTAGATTGAATTTCTTCTCACTTTGTAGTAGCTATCGTGACAT AATGCATTGTAATAAGAAGCCATTTTATCTAAAAGGAGGTAGCACTGTGGATTCCAGTAC AATGGACTCCTATCTTATGCATGCTTTGAATCATATTAACAGAACGAGAGAGATTGTTGT AAAAAATGATGCGAAGCTTAGGAGTGACCCTAGCAAAGATATTTTGGATGATAACTCATT CCTCGATCAGGGCTTTACACGTCCAAAGGTTCTTTTCCTGTTACCTCTAAAAAGCATTGC GAGGCGTGTTGTGAAGAGGTTGATCCAACTGTCCCCACTGTCACAAAAGGATATCATTGC AAAATTCGAAGGGAAGTTTGGCGAATCAGATGATGAAGTAGAGGAGCCTGTTCAAAGTAA TAAACCTGCAGACTTTGACCTACTGTTTGCTGGAGATACTGATGATGAGTTCCTTTTTGG GATAAAATATACAAAAAAATCTATGAATCTGTTCAGCAACTTCTACTCATCTGATATCAT TGTTGCATCTCCTTTGGCACTTATAAAGAAAATCAATGGAGTTGATGACAACGGAAAGGA ACCTGCCAAGGAAAGGGATTTTGATTTCCTATCATCAATTGAAATAGTGGTGGTTGATCA CGCAGATGTGATTCTTATGCAGAGTTGGTCACATCTGTATGCTGTGTTTGAACAATTAAA TCAGTTGCCATCAAAGGAACATGGAACCAATGTGATGCGTATTAGGCCATGGTACTTGGA TCAGCATGCACGTTACTATCGGCAAACAATACTCTTGAGCTCTTATCTTACTCCAGAGAT GAATGCTTTATTCAATGGATTATGCTTGAATTATGAGGGGAAGGTTAAGCTGGTGACTGA ATTTAAAGGTGTTCTTTCTAAAATACAGTTTGAAGCACCGCAGGTGTATGAAAGGTTTGA TGCATCTTCTATTACTGAAGTTGATGATGCTCGCTTTGATCATTTCTGCAAGAAGGTGTA CCCAAAGATTCAGGAGTCAGATGAGGGTCGGGTGTTGCTATTCGTCAGTTCATACTTTGA ATATATTAGGATAAGAAACTTCTTAAAATCTCAGGAAGCATCGTTTTGTAGAATTGGGGA GACAACATCGCAACAAGATATATCACGTGCAAGACTCTGGTTTTTTGAGGGCAAGAAAAA AATCTTACTTTATAGTGAGAGATCTCATTTCTACCACAGATACAAGATCAGGGGAGCACA CCATTTGATTATCTACTCTTTGCCAGGGAGAAAGGAATTTTACCCAGAGCTTGTAAACAT GCTCAGTGAATCAGAAAACAGGAAATGCACCGTCTTTTTTTCACGTCTGGATCTTCTGAA GTTAGAACGAATTGTTGGGACGTTTGCTGCACAAAGGTTGGTTTCTTCAGATAAGAGCAT TTTCGTGTTCCGCTGATTCGGGCGTCATGTTCGGCAGCCTCTCAAATTTTGGAATGCGAG ATGATTATGTACTGTACCACAACTCCTTATTTATTTGTAATCTAGATTGTGGATGCCATT TTTTGGTAAAGCTCGTGCTGAATGTTTCGCATCAGTATCTATTTCAATATTATGGATGCC ATTCTTTGTTAGTTTTTGGAAAACATGCATAGAAACAGTGCCGTCCCTGTGGGAGTGCCA CAAGCATGACCGCACAGGGCCACCAATCTCAAGGGGCCTCAAATAACTTAGTATGTGTCA CAGGATATTAGCCCAATAGATTAAATTAGATG