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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os05t0292800-01
CDS Infomation

cds chromosome:IRGSP-1.0:5:12896015:12896822:1 gene:Os05g0292800 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to One helix protein (OHP). (Os05t0292800-01)
Sequence

ATGGCGGCGACAGCTACACTTGCTGCCCCCTCCTTCTTGGCACATCAGTCGATCTTGAGC
CACAAGCCTCTGAGGAAGCTTGGTCTATCCCTGGAACTGCCAAGAACCAGATCTGTCAAA
ATTAGAGCTGCAAAGCTGCCTGCAGGGGTTGAGGTGCCGAGGAAGCAGCCAAAGCTGAGT
GAGCCCTTCCTGGGTTTCACCAGGACTGCAGAGATATGGAACTCCAGGGCCTGCATGATT
GGCCTCATTGGCACCTTCATCGTGGAGCTGGTGCTGAACAAGGGCATTCTTCAGATGATT
GGTGTGGAAGTCGGCAAGGGACTTGATCTCCCTCTTTAA

Peptide Sequence

PEP ID

Os05t0292800-01
PEP Infomation

pep chromosome:IRGSP-1.0:5:12896015:12896822:1 gene:Os05g0292800 transcript:Os05t0292800-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to One helix protein (OHP). (Os05t0292800-01)
Sequence

MAATATLAAPSFLAHQSILSHKPLRKLGLSLELPRTRSVKIRAAKLPAGVEVPRKQPKLS
EPFLGFTRTAEIWNSRACMIGLIGTFIVELVLNKGILQMIGVEVGKGLDLPL

Transcript Sequence

Transcript ID

Os05t0292800-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:5:12896015:12896822:1 gene:Os05g0292800 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to One helix protein (OHP). (Os05t0292800-01)
Sequence

AAGCTGAAAATCATTGGCCCAAGAGAAAACCTTGCTAGGCTAGCAGGGCACAGCAAGAAC
AAGGCCAGAACCAATGGCGGCGACAGCTACACTTGCTGCCCCCTCCTTCTTGGCACATCA
GTCGATCTTGAGCCACAAGCCTCTGAGGAAGCTTGGTCTATCCCTGGAACTGCCAAGAAC
CAGATCTGTCAAAATTAGAGCTGCAAAGCTGCCTGCAGGGGTTGAGGTGCCGAGGAAGCA
GCCAAAGCTGAGTGAGCCCTTCCTGGGTTTCACCAGGACTGCAGAGATATGGAACTCCAG
GGCCTGCATGATTGGCCTCATTGGCACCTTCATCGTGGAGCTGGTGCTGAACAAGGGCAT
TCTTCAGATGATTGGTGTGGAAGTCGGCAAGGGACTTGATCTCCCTCTTTAAATGCTAGT
CCATATATATTTTGTACCATATATACTATGAGATTTATGCAGTGAAATTATTAGAACAAA
GAGGGATTTTCACTTCTTGTTTGTACTAATATCATCAGAGAGATATATATCTGACGGTGT
TTTGCCTGCCT