Gene sequences

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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os05t0292200-01
CDS Infomation	cds chromosome:IRGSP-1.0:5:12865994:12872391:1 gene:Os05g0292200 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Transcription factor IIA large subunit (TFIIA-L1). (Os05t0292200-01)
Sequence	ATGGCCAGCAGCAACGTCTCCACGGTCTATATCTCCGTCATCGACGACGTCATCTCCAAG GTCCGCGACGACTTCATCTCGTACGGCGTCGGCGACGCTGTCCTCAACGAGCTCCAGGCG CTCTGGGAGATGAAGATGCTGCACTGCGGCGCAATCTCCGGGACCATCGACCGCTCCAAG GCGGCTCCCGCGCCGTCCGCAGGCACCCCCGGCGCTGGAACCACCCCGCCGGTACACGAC CTAAACGTGCCCTACGAGGCCACCTCGGAGGAGTACGCCACCCCCACAGCGGACATGCTG TTCCCCCCGACGCCGCTACAAACCCCGATCCAGACCCCTCTTCCAGGAACAGATGCAGGG ATGTACAACATTCCCACTGGGCCTTCAGACTATGCCCCTTCCCCGATCAGTGACGTGAGG AATGGCATGGCCATGAATGGAGCTGATCCAAAGACTGGTCGCCCGAGTCCCTACATGCCT CCACCCTCTCCCTGGATGACTCAGAGGCCGCTGGGCGTTGATGTGAATGTCGCTTATGTG GAGAACCGTGAGGACCCAGATAGGACCGGACAGCCTCCGCAACTAACTAAGGATTTTCTA ATGATGTCCTCTGGGAAACGCAAGAGGGATGAATATCCTGGTCAGCTCCCTTCTGGTTCT TTTGTGCCACAACAAGATGGAAGTGCAGATCAGATAGTTGAATTTGTTGTCTCAAAGGAC AACGCACAACAACTTTGGAGTTCCATTGTGAACAAGCAAGGAACAGCAACAAAAGAATCT TCCACAAAGGAAACAATAATTGCTCCAACGATTCCTCAACGGGATGGGATGGATGACTAT AATGATCCATTTTACTTCCAAGGAGTTCCAACTGAGGATTACAATACCCCTGGAGAATCG TCGGAATACCGAGCTCCCACACCGGCTGTTGGAACACCAAAACCGAGAAATGATGTAGGC GATGATGATGAGCCTCCGCTTAATGAAGATGACGATGATGATGATGAGTTAGATGACCTT GAGCAAGGGGAGGATGAGCCTAACACACAGCACCTTGTCCTCGCACAGTTTGACAAAGTG ACAAGGACAAAGAACCGCTGGAAATGCACTTTGAAGGATGGAATCATGCATTTAAATGGC CGAGATGTTCTATTCAACAAGGCTACCGGCGAATTTGATTTTTGA

Peptide Sequence

PEP ID	Os05t0292200-01
PEP Infomation	pep chromosome:IRGSP-1.0:5:12865994:12872391:1 gene:Os05g0292200 transcript:Os05t0292200-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Transcription factor IIA large subunit (TFIIA-L1). (Os05t0292200-01)
Sequence	MASSNVSTVYISVIDDVISKVRDDFISYGVGDAVLNELQALWEMKMLHCGAISGTIDRSK AAPAPSAGTPGAGTTPPVHDLNVPYEATSEEYATPTADMLFPPTPLQTPIQTPLPGTDAG MYNIPTGPSDYAPSPISDVRNGMAMNGADPKTGRPSPYMPPPSPWMTQRPLGVDVNVAYV ENREDPDRTGQPPQLTKDFLMMSSGKRKRDEYPGQLPSGSFVPQQDGSADQIVEFVVSKD NAQQLWSSIVNKQGTATKESSTKETIIAPTIPQRDGMDDYNDPFYFQGVPTEDYNTPGES SEYRAPTPAVGTPKPRNDVGDDDEPPLNEDDDDDDELDDLEQGEDEPNTQHLVLAQFDKV TRTKNRWKCTLKDGIMHLNGRDVLFNKATGEFDF

Transcript Sequence

Transcript ID	Os05t0292200-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:5:12865994:12872391:1 gene:Os05g0292200 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Transcription factor IIA large subunit (TFIIA-L1). (Os05t0292200-01)
Sequence	GTCCGCCTCCCTCCTCCTCTTCCCCCCCTCTTCTTCCCCAACTCGCCGCCGTCCTGCCCG CCTCCACCCTTTCGCCTCCTCGTTCCCCGCACCCAAACCCTAATCCTAGCCGCCGCTGCC GCTGCCGCTGCCGCCGCCATGGCCAGCAGCAACGTCTCCACGGTCTATATCTCCGTCATC GACGACGTCATCTCCAAGGTCCGCGACGACTTCATCTCGTACGGCGTCGGCGACGCTGTC CTCAACGAGCTCCAGGCGCTCTGGGAGATGAAGATGCTGCACTGCGGCGCAATCTCCGGG ACCATCGACCGCTCCAAGGCGGCTCCCGCGCCGTCCGCAGGCACCCCCGGCGCTGGAACC ACCCCGCCGGTACACGACCTAAACGTGCCCTACGAGGCCACCTCGGAGGAGTACGCCACC CCCACAGCGGACATGCTGTTCCCCCCGACGCCGCTACAAACCCCGATCCAGACCCCTCTT CCAGGAACAGATGCAGGGATGTACAACATTCCCACTGGGCCTTCAGACTATGCCCCTTCC CCGATCAGTGACGTGAGGAATGGCATGGCCATGAATGGAGCTGATCCAAAGACTGGTCGC CCGAGTCCCTACATGCCTCCACCCTCTCCCTGGATGACTCAGAGGCCGCTGGGCGTTGAT GTGAATGTCGCTTATGTGGAGAACCGTGAGGACCCAGATAGGACCGGACAGCCTCCGCAA CTAACTAAGGATTTTCTAATGATGTCCTCTGGGAAACGCAAGAGGGATGAATATCCTGGT CAGCTCCCTTCTGGTTCTTTTGTGCCACAACAAGATGGAAGTGCAGATCAGATAGTTGAA TTTGTTGTCTCAAAGGACAACGCACAACAACTTTGGAGTTCCATTGTGAACAAGCAAGGA ACAGCAACAAAAGAATCTTCCACAAAGGAAACAATAATTGCTCCAACGATTCCTCAACGG GATGGGATGGATGACTATAATGATCCATTTTACTTCCAAGGAGTTCCAACTGAGGATTAC AATACCCCTGGAGAATCGTCGGAATACCGAGCTCCCACACCGGCTGTTGGAACACCAAAA CCGAGAAATGATGTAGGCGATGATGATGAGCCTCCGCTTAATGAAGATGACGATGATGAT GATGAGTTAGATGACCTTGAGCAAGGGGAGGATGAGCCTAACACACAGCACCTTGTCCTC GCACAGTTTGACAAAGTGACAAGGACAAAGAACCGCTGGAAATGCACTTTGAAGGATGGA ATCATGCATTTAAATGGCCGAGATGTTCTATTCAACAAGGCTACCGGCGAATTTGATTTT TGAATTTTGTGACAAAGAGGAGCTATTTTAGAAGCTGCTGTATCGACATATCTTTGTCTT TGACATAAGAGTGGGGAATGACAAAAGCACTGGTGGGGGGTGGGTTTGTTCCTGTGGAGG CTTTGCTCTACCCAGTGGGTTTGTTACCGTAACTGTTATCGCTGTAAAAAAAAATGCTAC AGTTGGGACTGTTGTAGACATTTTCCTGAGATGGTTATCTTAAAGTTGGCGGAGGATTAC CTTGTCTGATTTGTGTTATCTGTTTCAATTTCTGTAAGATGGTTTAAAGAAGTAAATTTT CTGTTACCGC