Gene sequences

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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os05t0291700-03
CDS Infomation	cds chromosome:IRGSP-1.0:5:12833544:12839325:-1 gene:Os05g0291700 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to PTAC16 (PLASTID TRANSCRIPTIONALLY ACTIVE18); binding / catalytic. (Os05t0291700-01);Similar to cDNA clone:002-143-C11, full insert sequence. (Os05t0291700-02);NAD(P)-binding domain containing protein. (Os05t0291700-03)
Sequence	ATGCCTCCCGCCCTCACCTCCAACCCCCCCTCCTTCCGCCCCCTCTCCACCCCTCTAACC CGCCGCCGTGCCGCCACAACCTTCCTCTGCCGTGTCGGCCCTGGCAAGCCTTCCAAGGAC ACCGGCGCGGATGACGAGCCGAAGAAGAGGTCGTTCTTCGCCGATTTCGGTAAGCTCTCG GATGGAAGGTCGCTGATACCGGCCTTCCCGCCGGCCGCGGCTGGGTCTCTGTTCGCCGGC GGGAGGGGGAGGAAGGACCCGCAGACAGTGTTCGTCGCGGGCGCCACGGGGCAGGCGGGA GTTCGCATCGCGCAGACGCTGCTGCGGCAGGGGTTCGCCGTGCGCGCCGGGGTGCCGGAC CTCGCGTCCGCCCAGGAGCTGGCGCGGCTCGCCTCCGCGTACCGGCTCATTTCCCCCACC GAGGCGCGCCGACTCAACGCGGTGGAGTCCGATTTCGAGGACCCCGAGGCGATCGCCAAG TCCATCGGCCCTGCAACTAAGGTGGTGGTTACAGTCGGCGCAGCTGAGAAGGGGCCCGAC GGCGGTGTGGTCACCACCGACGAGGCGCTCCGAGTTGTGCAGGCTGCTGACCTTGCCGGC GTGACACACGTTGTGGTGGTGTACGACCTGGGGGCCGGTGACCCCAGTGGTGAGTCGACG TACAATGTGCTCGACGGGTTCACGTCCTTCTTCTCGAACCTCTTCTCCCGTGTGCAGTCC TTGCCACTAAACGAGTTCTTGGCTAAGGTGGTGGAGACCGACGTCAGGTACACTCTCATC AAGACGTCACTCACAGATGACTACAGCCCTGAGAGCACCTATGGCTTGGTCCTGGCCAAA GAGGGCGCGTCCAGCACTACTTCCTCAACAGAAACCGGCAAGGTGTCCAAGTTGCAGATT GCTGGTCTTGTGGCAGATGTCTTCTCCAACGTGGCAGTCGCGGAGAACAAGGTTGTCCAA GTTTCCACTAGCTCATCAGTAACATCCAAGACCATAGAGGAGGCTTTCTCAGCTATCCCT GAGGACAGTAGAAGGAAGGAGTACCAAGATGCTGTTGCAAAAGCACAGGCAGAAGAGGAG ACTCGGGCTTCGCAGCGAACTCGTCAGGCAGAAGAGGACACTACTACGGTCAAAGCCGGG GGGAAGAAGACGCCCTCTGATGAGGCAGCTGCAAGTGAGGCGCAAGCTTCTCTGGAGAAC CTTCTGAGCAGAGCCAAAGGGTTCGGCACGGACTTCTCATGGGAGAAGCTCAGCACACAA CTTGCAGGAGTGGCCACTCAGGACTCAGACGAGGTGGAACCAAAAGCAAAGAAGCTGGCA CCACAGAGAGCTGTTGTGAAGCCCGCGGCGCAGAAGACAAGACCAACACCAAAGCAGCCG GAATCCAAGCCGGATGTGAGGCCCGTGTTTGGGGGACTCTTCAAGCAAGAAACAATCTTT GTGGATGAGGACTGA

Peptide Sequence

PEP ID	Os05t0291700-03
PEP Infomation	pep chromosome:IRGSP-1.0:5:12833544:12839325:-1 gene:Os05g0291700 transcript:Os05t0291700-03 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to PTAC16 (PLASTID TRANSCRIPTIONALLY ACTIVE18); binding / catalytic. (Os05t0291700-01);Similar to cDNA clone:002-143-C11, full insert sequence. (Os05t0291700-02);NAD(P)-binding domain containing protein. (Os05t0291700-03)
Sequence	MPPALTSNPPSFRPLSTPLTRRRAATTFLCRVGPGKPSKDTGADDEPKKRSFFADFGKLS DGRSLIPAFPPAAAGSLFAGGRGRKDPQTVFVAGATGQAGVRIAQTLLRQGFAVRAGVPD LASAQELARLASAYRLISPTEARRLNAVESDFEDPEAIAKSIGPATKVVVTVGAAEKGPD GGVVTTDEALRVVQAADLAGVTHVVVVYDLGAGDPSGESTYNVLDGFTSFFSNLFSRVQS LPLNEFLAKVVETDVRYTLIKTSLTDDYSPESTYGLVLAKEGASSTTSSTETGKVSKLQI AGLVADVFSNVAVAENKVVQVSTSSSVTSKTIEEAFSAIPEDSRRKEYQDAVAKAQAEEE TRASQRTRQAEEDTTTVKAGGKKTPSDEAAASEAQASLENLLSRAKGFGTDFSWEKLSTQ LAGVATQDSDEVEPKAKKLAPQRAVVKPAAQKTRPTPKQPESKPDVRPVFGGLFKQETIF VDED

Transcript Sequence

Transcript ID	Os05t0291700-03
Transcript Infomation	cdna chromosome:IRGSP-1.0:5:12833544:12839325:-1 gene:Os05g0291700 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to PTAC16 (PLASTID TRANSCRIPTIONALLY ACTIVE18); binding / catalytic. (Os05t0291700-01);Similar to cDNA clone:002-143-C11, full insert sequence. (Os05t0291700-02);NAD(P)-binding domain containing protein. (Os05t0291700-03)
Sequence	ACCTGACACGCCTGCCATGCCTCCCGCCCTCACCTCCAACCCCCCCTCCTTCCGCCCCCT CTCCACCCCTCTAACCCGCCGCCGTGCCGCCACAACCTTCCTCTGCCGTGTCGGCCCTGG CAAGCCTTCCAAGGACACCGGCGCGGATGACGAGCCGAAGAAGAGGTCGTTCTTCGCCGA TTTCGGTAAGCTCTCGGATGGAAGGTCGCTGATACCGGCCTTCCCGCCGGCCGCGGCTGG GTCTCTGTTCGCCGGCGGGAGGGGGAGGAAGGACCCGCAGACAGTGTTCGTCGCGGGCGC CACGGGGCAGGCGGGAGTTCGCATCGCGCAGACGCTGCTGCGGCAGGGGTTCGCCGTGCG CGCCGGGGTGCCGGACCTCGCGTCCGCCCAGGAGCTGGCGCGGCTCGCCTCCGCGTACCG GCTCATTTCCCCCACCGAGGCGCGCCGACTCAACGCGGTGGAGTCCGATTTCGAGGACCC CGAGGCGATCGCCAAGTCCATCGGCCCTGCAACTAAGGTGGTGGTTACAGTCGGCGCAGC TGAGAAGGGGCCCGACGGCGGTGTGGTCACCACCGACGAGGCGCTCCGAGTTGTGCAGGC TGCTGACCTTGCCGGCGTGACACACGTTGTGGTGGTGTACGACCTGGGGGCCGGTGACCC CAGTGGTGAGTCGACGTACAATGTGCTCGACGGGTTCACGTCCTTCTTCTCGAACCTCTT CTCCCGTGTGCAGTCCTTGCCACTAAACGAGTTCTTGGCTAAGGTGGTGGAGACCGACGT CAGGTACACTCTCATCAAGACGTCACTCACAGATGACTACAGCCCTGAGAGCACCTATGG CTTGGTCCTGGCCAAAGAGGGCGCGTCCAGCACTACTTCCTCAACAGAAACCGGCAAGGT GTCCAAGTTGCAGATTGCTGGTCTTGTGGCAGATGTCTTCTCCAACGTGGCAGTCGCGGA GAACAAGGTTGTCCAAGTTTCCACTAGCTCATCAGTAACATCCAAGACCATAGAGGAGGC TTTCTCAGCTATCCCTGAGGACAGTAGAAGGAAGGAGTACCAAGATGCTGTTGCAAAAGC ACAGGCAGAAGAGGAGACTCGGGCTTCGCAGCGAACTCGTCAGGCAGAAGAGGACACTAC TACGGTCAAAGCCGGGGGGAAGAAGACGCCCTCTGATGAGGCAGCTGCAAGTGAGGCGCA AGCTTCTCTGGAGAACCTTCTGAGCAGAGCCAAAGGGTTCGGCACGGACTTCTCATGGGA GAAGCTCAGCACACAACTTGCAGGAGTGGCCACTCAGGACTCAGACGAGGTGGAACCAAA AGCAAAGAAGCTGGCACCACAGAGAGCTGTTGTGAAGCCCGCGGCGCAGAAGACAAGACC AACACCAAAGCAGCCGGAATCCAAGCCGGATGTGAGGCCCGTGTTTGGGGGACTCTTCAA GCAAGAAACAATCTTTGTGGATGAGGACTGAGCTAATGCAGACTCTGCCATTTTTCTTAA TCTTTTGTATGCTATATCTATGAAGCTCTTGGTGTATTCTTGGAAAGTGAATGAGTGACA GTTGTATAAAATTGGCTGCAAAACCGTATAACATTCTCTGCAGGTGAGAATTGTTCGC