Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os05t0289400-02
CDS Infomation	cds chromosome:IRGSP-1.0:5:12601388:12605153:-1 gene:Os05g0289400 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to CRN (Crooked neck) protein. (Os05t0289400-01);Hypothetical conserved gene. (Os05t0289400-02)
Sequence	CGTGCCCGAGCTATATACAAGTATGCACTTGATAGGGTGCCCAAAGGCCAGGCTGAGGAG CTGTACAGGAAGTTCCTTGCATTTGAAAAACAGTTTGGTGACCGTGAAGGAATTGAGGAT GCCATCGTGGGTAAGAGGAGATTCCAGTATGAGGACGAGGTGAGGAAGAACCCTCTCAAT TATGATTCATGGTTTGATTACATTAGGCTGGAGGAGAGTGTTGGGAACAATGACAGGATC AGGGAGGTGTATGAGAGAGCCATTGCTAATATCCCCCCAGCAGATGAGAAGCGTTACTGG CAACGATACATTTACCTATGGATAAATTATGCTTTGTATGAGGAGCTTGATGCAAAGGAC GTGGAACGGACCAGGGAAGTTTACAGCGAGTGTCTCAAATTGGTTCCACACAAGAAATTC ACTTTTGCCAAGATGTGGCTCATGGCAGCCCAGTTTGAGATAAGGCAAAGGAATCTTAAA GCTGCACGGCAGATACTCGGAAATGCCATTGGGATGTCTCCAAAGGGCAAGATATTCAAA AAGTACATTGAGATTGAGTTGTATCTTGGTAATTTTGACCGTTGTAGGACTCTCTATGAG AAGTATATTGAATGGTCTCCAGCAAACTGTTATGCCTGGAGGAAGTATGCTGAATTAGAG AAGAACCTTAGTGAGACTGATCGTGCTCGTTCCATATATGAGCTTGCTATTGCTCAGCCA GCCCTTGATACACCAGAAGTTTTGTGGAAGGAGTACTTGCAGTTTGAAATTGATGAAAAT GAATTCGATAGGACTCGCGAACTATACGAGAGATTGCTTGATAGAACAAAACATTTGAAG GTATGGATAAGCTATACCGAGTTTGAGGCCTCGGCTGGTTTGGCTGGGGAAGACGGTGAG AGTGAGGAGATTAAGAAAGAAGTTAGTTATCATGAACAGCAGATAGAACGGGTTCGAAGG TGCCGAGCAATCTTTGAAAGAGCATTCGAATACTTCAGAACTAGTGCTCCAGAGTTAAAG GAGGAAAGAGCAATGCTCCTTGAAGAATGGCTTAACAAGGAGGTGAGCTTTGGTGACCTT GGTGATGTCACCTTAGTGCAGAAAAAGGCGCCAAGGAAAGTGAAGAGAAAGAGACCAATT CCTACAGAGGATGGCTCCACTGTTGCGTATGAAGAGTACATTGATTATATTTTCCCCGAT GAGGTTGCGCTGGCTCCAAACCTCAAGATCCTTGAAGCAGCCTATAAGTGGAAGAAGCAG AAGACAGATGATACTGATGATGTCTGA

Peptide Sequence

PEP ID	Os05t0289400-02
PEP Infomation	pep chromosome:IRGSP-1.0:5:12601388:12605153:-1 gene:Os05g0289400 transcript:Os05t0289400-02 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to CRN (Crooked neck) protein. (Os05t0289400-01);Hypothetical conserved gene. (Os05t0289400-02)
Sequence	RARAIYKYALDRVPKGQAEELYRKFLAFEKQFGDREGIEDAIVGKRRFQYEDEVRKNPLN YDSWFDYIRLEESVGNNDRIREVYERAIANIPPADEKRYWQRYIYLWINYALYEELDAKD VERTREVYSECLKLVPHKKFTFAKMWLMAAQFEIRQRNLKAARQILGNAIGMSPKGKIFK KYIEIELYLGNFDRCRTLYEKYIEWSPANCYAWRKYAELEKNLSETDRARSIYELAIAQP ALDTPEVLWKEYLQFEIDENEFDRTRELYERLLDRTKHLKVWISYTEFEASAGLAGEDGE SEEIKKEVSYHEQQIERVRRCRAIFERAFEYFRTSAPELKEERAMLLEEWLNKEVSFGDL GDVTLVQKKAPRKVKRKRPIPTEDGSTVAYEEYIDYIFPDEVALAPNLKILEAAYKWKKQ KTDDTDDV

Transcript Sequence

Transcript ID	Os05t0289400-02
Transcript Infomation	cdna chromosome:IRGSP-1.0:5:12601388:12605153:-1 gene:Os05g0289400 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to CRN (Crooked neck) protein. (Os05t0289400-01);Hypothetical conserved gene. (Os05t0289400-02)
Sequence	AGCGTGCCCGAGCTATATACAAGTATGCACTTGATAGGGTGCCCAAAGGCCAGGCTGAGG AGCTGTACAGGAAGTTCCTTGCATTTGAAAAACAGTTTGGTGACCGTGAAGGAATTGAGG ATGCCATCGTGGGTAAGAGGAGATTCCAGTATGAGGACGAGGTGAGGAAGAACCCTCTCA ATTATGATTCATGGTTTGATTACATTAGGCTGGAGGAGAGTGTTGGGAACAATGACAGGA TCAGGGAGGTGTATGAGAGAGCCATTGCTAATATCCCCCCAGCAGATGAGAAGCGTTACT GGCAACGATACATTTACCTATGGATAAATTATGCTTTGTATGAGGAGCTTGATGCAAAGG ACGTGGAACGGACCAGGGAAGTTTACAGCGAGTGTCTCAAATTGGTTCCACACAAGAAAT TCACTTTTGCCAAGATGTGGCTCATGGCAGCCCAGTTTGAGATAAGGCAAAGGAATCTTA AAGCTGCACGGCAGATACTCGGAAATGCCATTGGGATGTCTCCAAAGGGCAAGATATTCA AAAAGTACATTGAGATTGAGTTGTATCTTGGTAATTTTGACCGTTGTAGGACTCTCTATG AGAAGTATATTGAATGGTCTCCAGCAAACTGTTATGCCTGGAGGAAGTATGCTGAATTAG AGAAGAACCTTAGTGAGACTGATCGTGCTCGTTCCATATATGAGCTTGCTATTGCTCAGC CAGCCCTTGATACACCAGAAGTTTTGTGGAAGGAGTACTTGCAGTTTGAAATTGATGAAA ATGAATTCGATAGGACTCGCGAACTATACGAGAGATTGCTTGATAGAACAAAACATTTGA AGGTATGGATAAGCTATACCGAGTTTGAGGCCTCGGCTGGTTTGGCTGGGGAAGACGGTG AGAGTGAGGAGATTAAGAAAGAAGTTAGTTATCATGAACAGCAGATAGAACGGGTTCGAA GGTGCCGAGCAATCTTTGAAAGAGCATTCGAATACTTCAGAACTAGTGCTCCAGAGTTAA AGGAGGAAAGAGCAATGCTCCTTGAAGAATGGCTTAACAAGGAGGTGAGCTTTGGTGACC TTGGTGATGTCACCTTAGTGCAGAAAAAGGCGCCAAGGAAAGTGAAGAGAAAGAGACCAA TTCCTACAGAGGATGGCTCCACTGTTGCGTATGAAGAGTACATTGATTATATTTTCCCCG ATGAGGTTGCGCTGGCTCCAAACCTCAAGATCCTTGAAGCAGCCTATAAGTGGAAGAAGC AGAAGACAGATGATACTGATGATGTCTGAGCTAAACTGCCACTGTTTCTGTGGTCACGAA TGAGCTAATCGTTGTCAAAATTAGATCTGAAGGTCTTCTACAATGCTGGGTAAAGTTGTG AATGTGCCCTACCTGATCATGTGGTGTGGTGCTGGCACTTCGATCAATTCAGTTTTACAT CTGTATGTCTGATGGATAGAAACTGAAACAAGTTCATAGTCTTTAATTTAGTTTTGGCAT GC