Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os05t0279400-02
CDS Infomation	cds chromosome:IRGSP-1.0:5:11660604:11666248:1 gene:Os05g0279400 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:RING finger protein description:Zinc finger, RING-type domain containing protein. (Os05t0279400-01);Zinc finger, RING-type domain containing protein. (Os05t0279400-02)
Sequence	ATGGACGACAGCTGCGCGGTGTGCGCGGACGCGCTGGAGTGGGTGGCCTACGGGGCCTGC GGCCACCGCGAGGTTTGCTCGACCTGCGTCGTTCGCCTCCGCTTCGTGATGGGCGACAAG CACTGCTGCATCTGCAAGACCGAGTGCTCCTCCGTATTCGTCACCAAGGCTATGGGCGAT TACACAAAAGTGATAAATGATTTCAATATTTTCCCCCCTGTGGCAACTGAGGGAAAGGTG GGGGAGTACTGGTACCATGAGGATAGCCAGGCATTTTTTGACGATGCTGAGCACTACAAG ATGATACGAGCAATGTGTCGGCTTTCTTGTAGTGTGTGTGACAAAGCTGAAGATCAGGCT GGCCAGGCAGCACAAGTAAGGCGCAAAAGCAAGTTCAGGAGCATTGAACAGCTGAAGGGA CATTTGTTCCATCAACATAGGTTATACATGTGCAGTCTTTGCTTGGAGGGGAGAAAGGTG TTCATTTGTGAACAGAAGCTTTATACAAGGACACAGTTAAATCAGCATGTAAAAACTGGT GACTCTGAGGTGGATGGCTCTGAGGTTGAGCGCAGTGGTTTTGCAGGACATCCTATGTGC GAGTTCTGCAGAAGTTCATTTTATGGAGATAACGAGCTTTACACACATATGTCCCGAGAA CACTATTCATGTCACATATGTCAAAGGCAACATCCTGGGCAGTATGATTATTTCCGGAAT TATGATGACTTGGAGTTGCATTTCCGTAAAGATCATTTCCTCTGTGAAGATGAAGCATGT TTGGCGAAGAAGTTTGTAGTCTTCCAGAGCGAAGCAGAGCTCAAGAGACATAATGCTATG GAGCATGGTGGGCGGATGTCTCGTGCTCAGAGGAATGCCGCACTTCAGATACCAACCAGC TTTATATATCGAAGAAACGAGCAAGATGAAAGGCGTGGTAGAGGTAGGGGACGGAATTCT CACCGTGATGGATCTGACCGGGATACCCCCTCTATGCAAAATGGCAGTGCAATTATAGGC AACGGTTTTCCAAGTCGAGTTGATAATGTTACAGGGTCTGTGAGTGTCAGTTCTAGTTCT GGGCGAGGAGAATCTGGCCAAAGCTCAGGCAATGGACGTGTGTTTGAACACTTGTCCTTT CCTCCTCTTCAAGACCAGGATATTCCTGATGCAAGGATGGACTCTGCTCCTGATGAAACC TCATTCCCTTCCCTCTCAGAGCAGCAAACCAGATATGCTCATGCTCTTAGTCAGAGTTCC CTTGCTGCCAAGCTTGGGGATGAGTTATTATTCCCTCCACTACCTGGGTCAAGTAGCAAC AGGGGTTCTACTTCAACTCAACAGGGGCTACAAAGTCTAGCGAAGAACACACTTGCATCA AGGCTTCAGCAGCGTAGCAAGGGCAGTGTGAAAGTACTTCATTCTGCCCGGCCTCGCCCA TCTGAAAATCCTGAATCAGTCCCTCCTGTTTCTAGTTCCCCACAGATGTGGCCTACACCT GATCAGGGGCTGCTTCATTCTAGTTCTTCCCAGCTTCGAATTGTAAGAGAAAATGGGATT ATGTCATCTGCCGACTCGGCATGGAATCCTGGAGGTGGAGCTTCAAACAGGATGAAGCAC TCTGTTTCTACTCCTAATCTTATGTCTGGTGGGTCCTCTGTTCAGGCACTAAGTACATCT AACGGTGGCAATAAAAAACAACAGCCACCACAAAGCAGCCAAACATTGCCTGCTGCTGAT GATGTTCGTGCTGCCAATAAGACCCTGGTTGAAAGAATGCGCAGTGCTTTAGGCATGGAT GAAGATAGGTACTCTGCATTTAAAGAAATCGCTGGTGAATACCGTCAAGGCATCATTGGT ACTTCAGAATATCTTTCATATGTTGAGCAATTTGGTCTGTCACACCTTGTGCCTGAAATG GCTAGGCTGTTACCTGATCCTCAGAAGCAGAAAGAACTTGCTGATGCCTATCACACCAAT ATACGCTTCAGAAGCCTCCAAGAGAACAGTGATGGTTTAACCATTACCTCAAAGGAGGGT GGCCGCAAGAAAAAGGGCAAGGGAAAATCTCATGATGTTACAGAAACTAGTGCTGCTCCT GCTAAGGATATGAAGGATTCACTAGCAGATAGCTTCCTGGACACTGTAAGGAAGCTTCAG TTAAACAAGACTCAGGAAGGAGAGGCTGAGGTGCTGTCAAGGGATGGGTATCGATCTTCC AAGGGAAAGGCCCAACTAATAACTGGAGGTTCATCATCTAGTACACCATGTCTAGATGGT GATCATGGTGCCATTTCAATGGCTTCTTGTGCCAAAGATGATGTAGGCAAGGGAGGAGGT AGCAGCAACAGCAACATCAACAAACAATCAAAGAAGACATCAAAGTTTCTCAGAGCCCGA TTAGGTGATAACTCCTTAGCTACACTTGATTTGAGTCGTCCTACCATGAGCCCTGAACGA CCAGAAAGGGAATCGCAAGGCCCACAGGTAGGGTTGCCTATGCGAGGTGTTTGGAAAAAT GGAGGGGGCCAGAAGCTCTTTACGGGCAATGGAAGGAAGTAA

Peptide Sequence

PEP ID	Os05t0279400-02
PEP Infomation	pep chromosome:IRGSP-1.0:5:11660604:11666248:1 gene:Os05g0279400 transcript:Os05t0279400-02 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:RING finger protein description:Zinc finger, RING-type domain containing protein. (Os05t0279400-01);Zinc finger, RING-type domain containing protein. (Os05t0279400-02)
Sequence	MDDSCAVCADALEWVAYGACGHREVCSTCVVRLRFVMGDKHCCICKTECSSVFVTKAMGD YTKVINDFNIFPPVATEGKVGEYWYHEDSQAFFDDAEHYKMIRAMCRLSCSVCDKAEDQA GQAAQVRRKSKFRSIEQLKGHLFHQHRLYMCSLCLEGRKVFICEQKLYTRTQLNQHVKTG DSEVDGSEVERSGFAGHPMCEFCRSSFYGDNELYTHMSREHYSCHICQRQHPGQYDYFRN YDDLELHFRKDHFLCEDEACLAKKFVVFQSEAELKRHNAMEHGGRMSRAQRNAALQIPTS FIYRRNEQDERRGRGRGRNSHRDGSDRDTPSMQNGSAIIGNGFPSRVDNVTGSVSVSSSS GRGESGQSSGNGRVFEHLSFPPLQDQDIPDARMDSAPDETSFPSLSEQQTRYAHALSQSS LAAKLGDELLFPPLPGSSSNRGSTSTQQGLQSLAKNTLASRLQQRSKGSVKVLHSARPRP SENPESVPPVSSSPQMWPTPDQGLLHSSSSQLRIVRENGIMSSADSAWNPGGGASNRMKH SVSTPNLMSGGSSVQALSTSNGGNKKQQPPQSSQTLPAADDVRAANKTLVERMRSALGMD EDRYSAFKEIAGEYRQGIIGTSEYLSYVEQFGLSHLVPEMARLLPDPQKQKELADAYHTN IRFRSLQENSDGLTITSKEGGRKKKGKGKSHDVTETSAAPAKDMKDSLADSFLDTVRKLQ LNKTQEGEAEVLSRDGYRSSKGKAQLITGGSSSSTPCLDGDHGAISMASCAKDDVGKGGG SSNSNINKQSKKTSKFLRARLGDNSLATLDLSRPTMSPERPERESQGPQVGLPMRGVWKN GGGQKLFTGNGRK

Transcript Sequence

Transcript ID	Os05t0279400-02
Transcript Infomation	cdna chromosome:IRGSP-1.0:5:11660604:11666248:1 gene:Os05g0279400 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:RING finger protein description:Zinc finger, RING-type domain containing protein. (Os05t0279400-01);Zinc finger, RING-type domain containing protein. (Os05t0279400-02)
Sequence	AAGCGGAGAGAGAGAGAAAAAGGAAAAACTGTCTCGTCGTCTCGAACCTTCTCGCCTCCC TCACCGCCCTAACCCTTCCTCTTCTCCTCCGCCGCCGCCACCGCCGCTCCGCCCCCTCCG TCCCTTCGCCGCTACCGATCTCCCCCGCCCGCCCGCGGAGATGGACGACAGCTGCGCGGT GTGCGCGGACGCGCTGGAGTGGGTGGCCTACGGGGCCTGCGGCCACCGCGAGGTTTGCTC GACCTGCGTCGTTCGCCTCCGCTTCGTGATGGGCGACAAGCACTGCTGCATCTGCAAGAC CGAGTGCTCCTCCGTATTCGTCACCAAGGCTATGGGCGATTACACAAAAGTGATAAATGA TTTCAATATTTTCCCCCCTGTGGCAACTGAGGGAAAGGTGGGGGAGTACTGGTACCATGA GGATAGCCAGGCATTTTTTGACGATGCTGAGCACTACAAGATGATACGAGCAATGTGTCG GCTTTCTTGTAGTGTGTGTGACAAAGCTGAAGATCAGGCTGGCCAGGCAGCACAAGTAAG GCGCAAAAGCAAGTTCAGGAGCATTGAACAGCTGAAGGGACATTTGTTCCATCAACATAG GTTATACATGTGCAGTCTTTGCTTGGAGGGGAGAAAGGTGTTCATTTGTGAACAGAAGCT TTATACAAGGACACAGTTAAATCAGCATGTAAAAACTGGTGACTCTGAGGTGGATGGCTC TGAGGTTGAGCGCAGTGGTTTTGCAGGACATCCTATGTGCGAGTTCTGCAGAAGTTCATT TTATGGAGATAACGAGCTTTACACACATATGTCCCGAGAACACTATTCATGTCACATATG TCAAAGGCAACATCCTGGGCAGTATGATTATTTCCGGAATTATGATGACTTGGAGTTGCA TTTCCGTAAAGATCATTTCCTCTGTGAAGATGAAGCATGTTTGGCGAAGAAGTTTGTAGT CTTCCAGAGCGAAGCAGAGCTCAAGAGACATAATGCTATGGAGCATGGTGGGCGGATGTC TCGTGCTCAGAGGAATGCCGCACTTCAGATACCAACCAGCTTTATATATCGAAGAAACGA GCAAGATGAAAGGCGTGGTAGAGGTAGGGGACGGAATTCTCACCGTGATGGATCTGACCG GGATACCCCCTCTATGCAAAATGGCAGTGCAATTATAGGCAACGGTTTTCCAAGTCGAGT TGATAATGTTACAGGGTCTGTGAGTGTCAGTTCTAGTTCTGGGCGAGGAGAATCTGGCCA AAGCTCAGGCAATGGACGTGTGTTTGAACACTTGTCCTTTCCTCCTCTTCAAGACCAGGA TATTCCTGATGCAAGGATGGACTCTGCTCCTGATGAAACCTCATTCCCTTCCCTCTCAGA GCAGCAAACCAGATATGCTCATGCTCTTAGTCAGAGTTCCCTTGCTGCCAAGCTTGGGGA TGAGTTATTATTCCCTCCACTACCTGGGTCAAGTAGCAACAGGGGTTCTACTTCAACTCA ACAGGGGCTACAAAGTCTAGCGAAGAACACACTTGCATCAAGGCTTCAGCAGCGTAGCAA GGGCAGTGTGAAAGTACTTCATTCTGCCCGGCCTCGCCCATCTGAAAATCCTGAATCAGT CCCTCCTGTTTCTAGTTCCCCACAGATGTGGCCTACACCTGATCAGGGGCTGCTTCATTC TAGTTCTTCCCAGCTTCGAATTGTAAGAGAAAATGGGATTATGTCATCTGCCGACTCGGC ATGGAATCCTGGAGGTGGAGCTTCAAACAGGATGAAGCACTCTGTTTCTACTCCTAATCT TATGTCTGGTGGGTCCTCTGTTCAGGCACTAAGTACATCTAACGGTGGCAATAAAAAACA ACAGCCACCACAAAGCAGCCAAACATTGCCTGCTGCTGATGATGTTCGTGCTGCCAATAA GACCCTGGTTGAAAGAATGCGCAGTGCTTTAGGCATGGATGAAGATAGGTACTCTGCATT TAAAGAAATCGCTGGTGAATACCGTCAAGGCATCATTGGTACTTCAGAATATCTTTCATA TGTTGAGCAATTTGGTCTGTCACACCTTGTGCCTGAAATGGCTAGGCTGTTACCTGATCC TCAGAAGCAGAAAGAACTTGCTGATGCCTATCACACCAATATACGCTTCAGAAGCCTCCA AGAGAACAGTGATGGTTTAACCATTACCTCAAAGGAGGGTGGCCGCAAGAAAAAGGGCAA GGGAAAATCTCATGATGTTACAGAAACTAGTGCTGCTCCTGCTAAGGATATGAAGGATTC ACTAGCAGATAGCTTCCTGGACACTGTAAGGAAGCTTCAGTTAAACAAGACTCAGGAAGG AGAGGCTGAGGTGCTGTCAAGGGATGGGTATCGATCTTCCAAGGGAAAGGCCCAACTAAT AACTGGAGGTTCATCATCTAGTACACCATGTCTAGATGGTGATCATGGTGCCATTTCAAT GGCTTCTTGTGCCAAAGATGATGTAGGCAAGGGAGGAGGTAGCAGCAACAGCAACATCAA CAAACAATCAAAGAAGACATCAAAGTTTCTCAGAGCCCGATTAGGTGATAACTCCTTAGC TACACTTGATTTGAGTCGTCCTACCATGAGCCCTGAACGACCAGAAAGGGAATCGCAAGG CCCACAGGTAGGGTTGCCTATGCGAGGTGTTTGGAAAAATGGAGGGGGCCAGAAGCTCTT TACGGGCAATGGAAGGAAGTAAAATCATTTTGCAGATGCAGTTTGACTTTTGAAACGAGC TGGTCAATGGTACAAGCAGATTCTGTTGCCAAGTGTGCATATTTTGTGATCAGTTGGTTA GCTGGTCGTGGGAGAGCTTTATTGCTCCTTTGAAGATCATCGCCTTTGAATTACACCTCA CTTTCTTGTTTTCTTTGCCAAAACATCAACTGAGGCTGAAACTTGAAACAGTAATGGCGT GATATTACGTTACTGGCCAGTTAGTGGAATCCATTGGTAGATGGTATTTTACATGAGCTC TGCCAAATATTATAGTTACTTTATCACTTTGTTTGTGCTGGATTGCAGTCAAAGACATGT ATTTAGTGTGTCTGTGATCAGGCCGACCCTAACTGAATTCGTGAAAGTTGAAATCTCAAT GTTCTTCGTGTTATTT