Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os05t0278500-01
CDS Infomation	cds chromosome:IRGSP-1.0:5:11609491:11615022:-1 gene:Os05g0278500 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:ACYLTRANSFERASE 5 description:Transferase family protein. (Os05t0278500-01)
Sequence	ATGGTCGCTGTCACCGTGATGAGGAAGTCCCGGAACTTCGTCGGGCCGTCTCCTCCGACG CCGCCGGCCGAGATCACGACGACGCTCGAGCTGTCGTCCATCGACCGCGTGCCCGGGCTG CGCCACAACGTGCGGTCCCTGCACGTGTTCCGCCGCCACAAGAACAGCGGGCCCGTCGTC GACGGTGATAGCAGGAGGCCGGCCGCCGTGATCCGCGCGGCGCTCGCCCGGGCGCTGGCG GACTACCCGGCGTTCGCCGGCCGATTCGTCGGCTCCCTGCTGGCCGGCGACGCCTGCGTC GCGTGCACCGGCGAGGGCGCGTGGTTCGTGGAGGCAGCCGCGGACTGCAGCCTCGACGAC GTGAACGGCCTCGAGTACCCGCTCATGATCTCCGAGGAGGAGCTGCTGCCTGCCCCCGAG GACGGCGTCGACCCTACCAGTATTCCAGTCATGATGCAGGTGACTGAATTCACTTGTGGA GGATTTATCTTGGGCCTTGTGGCAGTCCACACCCTTGCTGATGGACTTGGAGCAGCACAA TTCATCACTGCAGTAGCTGAATTGGCCCGTGGCATGGACAAGCTCAGGGTGGCTCCCGTG TGGGATCGCTCGCTGATACCGAACCCACCTAAGCTCCCTCCTGGGCCACCACCATCGTTC CAGTCCTTTGGTTTTCAGCATTTCTCCACAGATGTCACCTCTGACCGTATAGCTCACGTG AAGGCTGAGTACTTCCAGACCTTTGGCCAGTATTGTTCCACCTTTGATGTTGCTACTGCT AAGGTTTGGCAGGCCAGGACACGGGCCGTCGGGTACAAACCGGAGATCCAGGTCCATGTG TGTTTCTTTGCAAACACGCGTCACCTGCTCACGCAGGTTCTCCCAAAAGATGGGGGCTAC TATGGCAACTGCTTTTATCCAGTGACTGTGACAGCAATAGCTGAGGATGTTGCCACCAAA GAGTTGCTTGATGTGATCAAGATAATTCGGGATGGAAAGGCGAGGCTCCCCATGGAGTTT GCAAAGTGGGCTTCAGGGGATGTGAAAGTTGATCCCTACGCATTGACATTTGAACACAAT GTGCTTTTTGTGTCTGATTGGACGAGGTTAGGATTCTTCGAGGTAGACTATGGGTGGGGT ACACCTAATCACATCATACCATTCACTTATGCAGACTACATGGCAGTCGCAGTGCTTGGT GCTCCACCAATGCCAAAGAAAGGGACCCGGATTATGACACAGTGTGTGGAGAACAAGTGT ATCAAGGAGTTCCAAGATGAGATGAAGGCCTTCATATAA

Peptide Sequence

PEP ID	Os05t0278500-01
PEP Infomation	pep chromosome:IRGSP-1.0:5:11609491:11615022:-1 gene:Os05g0278500 transcript:Os05t0278500-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:ACYLTRANSFERASE 5 description:Transferase family protein. (Os05t0278500-01)
Sequence	MVAVTVMRKSRNFVGPSPPTPPAEITTTLELSSIDRVPGLRHNVRSLHVFRRHKNSGPVV DGDSRRPAAVIRAALARALADYPAFAGRFVGSLLAGDACVACTGEGAWFVEAAADCSLDD VNGLEYPLMISEEELLPAPEDGVDPTSIPVMMQVTEFTCGGFILGLVAVHTLADGLGAAQ FITAVAELARGMDKLRVAPVWDRSLIPNPPKLPPGPPPSFQSFGFQHFSTDVTSDRIAHV KAEYFQTFGQYCSTFDVATAKVWQARTRAVGYKPEIQVHVCFFANTRHLLTQVLPKDGGY YGNCFYPVTVTAIAEDVATKELLDVIKIIRDGKARLPMEFAKWASGDVKVDPYALTFEHN VLFVSDWTRLGFFEVDYGWGTPNHIIPFTYADYMAVAVLGAPPMPKKGTRIMTQCVENKC IKEFQDEMKAFI

Transcript Sequence

Transcript ID	Os05t0278500-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:5:11609491:11615022:-1 gene:Os05g0278500 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:ACYLTRANSFERASE 5 description:Transferase family protein. (Os05t0278500-01)
Sequence	ACACACACACGCACAACGCCCAAACTGGTGCGCACCTACACCCGCGCACACAACACAGAC ACGGACGTACACTTTGCACCTCTCTCACCGCACGTAGTCGCCATGGTCGCTGTCACCGTG ATGAGGAAGTCCCGGAACTTCGTCGGGCCGTCTCCTCCGACGCCGCCGGCCGAGATCACG ACGACGCTCGAGCTGTCGTCCATCGACCGCGTGCCCGGGCTGCGCCACAACGTGCGGTCC CTGCACGTGTTCCGCCGCCACAAGAACAGCGGGCCCGTCGTCGACGGTGATAGCAGGAGG CCGGCCGCCGTGATCCGCGCGGCGCTCGCCCGGGCGCTGGCGGACTACCCGGCGTTCGCC GGCCGATTCGTCGGCTCCCTGCTGGCCGGCGACGCCTGCGTCGCGTGCACCGGCGAGGGC GCGTGGTTCGTGGAGGCAGCCGCGGACTGCAGCCTCGACGACGTGAACGGCCTCGAGTAC CCGCTCATGATCTCCGAGGAGGAGCTGCTGCCTGCCCCCGAGGACGGCGTCGACCCTACC AGTATTCCAGTCATGATGCAGGTGACTGAATTCACTTGTGGAGGATTTATCTTGGGCCTT GTGGCAGTCCACACCCTTGCTGATGGACTTGGAGCAGCACAATTCATCACTGCAGTAGCT GAATTGGCCCGTGGCATGGACAAGCTCAGGGTGGCTCCCGTGTGGGATCGCTCGCTGATA CCGAACCCACCTAAGCTCCCTCCTGGGCCACCACCATCGTTCCAGTCCTTTGGTTTTCAG CATTTCTCCACAGATGTCACCTCTGACCGTATAGCTCACGTGAAGGCTGAGTACTTCCAG ACCTTTGGCCAGTATTGTTCCACCTTTGATGTTGCTACTGCTAAGGTTTGGCAGGCCAGG ACACGGGCCGTCGGGTACAAACCGGAGATCCAGGTCCATGTGTGTTTCTTTGCAAACACG CGTCACCTGCTCACGCAGGTTCTCCCAAAAGATGGGGGCTACTATGGCAACTGCTTTTAT CCAGTGACTGTGACAGCAATAGCTGAGGATGTTGCCACCAAAGAGTTGCTTGATGTGATC AAGATAATTCGGGATGGAAAGGCGAGGCTCCCCATGGAGTTTGCAAAGTGGGCTTCAGGG GATGTGAAAGTTGATCCCTACGCATTGACATTTGAACACAATGTGCTTTTTGTGTCTGAT TGGACGAGGTTAGGATTCTTCGAGGTAGACTATGGGTGGGGTACACCTAATCACATCATA CCATTCACTTATGCAGACTACATGGCAGTCGCAGTGCTTGGTGCTCCACCAATGCCAAAG AAAGGGACCCGGATTATGACACAGTGTGTGGAGAACAAGTGTATCAAGGAGTTCCAAGAT GAGATGAAGGCCTTCATATAATATATATTATATGTGTAGTAGGTTGGAATAAATTTGCTA TTTATGAGTAGTATTTGCAGGGTCCAATCAATACCATGCTTGTTGTATTGTGTTAAATAC ATGATATATGACCTGGACAATTATATATACGTGTGTTAATTAAGTTATAAG