Gene sequences

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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os05t0275700-01
CDS Infomation	cds chromosome:IRGSP-1.0:5:11320504:11327124:-1 gene:Os05g0275700 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:RING finger protein OsRFPHC-15, RING-HC protein 15 description:Similar to Peroxisome assembly protein 2 (Peroxin-2) (AthPEX2) (Pex2p). (Os05t0275700-01)
Sequence	ATGACGGATCCCGAAACCCTACCCTCTCCCTCCGCCTCCACTGACTCGTCGTCGCCACCA CCGGATGCATGGGCCGCCGAGTACCGGAGACTCCTCCCTCAGTGGGAGTCAATGCGTGAT TCATCCAAGATCGCTATCCCAATTTCAATATCTAGAGTTAACCAATTTGATGCTGCGAGG CTTGATGTCGAGATGTCCGCCATGTTGAAAGAGCAGTTAGTCAAAGTATTCTCTTTGGTG AAGCCAGGACTCCTGTTCCAATATGAGCCAGAATTAGATGCTTTCCTTGAGTTCCTCATA TGGAGATTCTCAATATGGGTTGATAAGCCAACTCCTGGGAATGCGCTCATGAACCTGAGA TATAGAGATGAACGGGCAGCGCCCATAACAGGAAAAGAAGTCAGAACAGGTTTGGAAGGA CCTGGACTTTCAGTTTCTCAAAAGGTTTTGTATTGTATTAGCACTGTTGGTGGCCAATAT ATATGGTCCCGCTTGCAGTCTTTTTCTGCTTTCCGTCGATGGGGTGATTCTGAACAGAGA CCACTAGCACGTCGCGCTTGGGGCTTGGTGCAGCATGCTGAAGGCTTATACAGAGCTTCT TCATTCTTTAACCTTTTGTTATTTCTTTATGGTGCAAGATATAAAACTATTGTTGAAAGG ATTCTGAAAGCAAGACTTGTTTATGAGAGCCCCAACATGAATAGGGCAGTAAGCTTTGAG TACATGAACCGGCAACTGGTTTGGAATGAATTTTCGGAAATGTTGCTTTTGCTTCTTCCC CTCTTAAACTCATCCTCAGTAAAGAAGTTTCTTCTACCTTTCTCCAAAGATAAATCAGCA AGTTCTTCTGGCGATGAAGCAGACTGCCCTATATGTCGCTCCAGTCCTAGCATTCCCTTC GAAGCTCTCCCATGTCAACACAGGTATTGCTATTACTGCCTGCAAACACGTTGTGCAGCC ACAAACTCGTATAGATGTGCAAGGTGTAATGAGATTGTTGTTGCAATTCAAAGACAAGGA TCAAGTTAG

Peptide Sequence

PEP ID	Os05t0275700-01
PEP Infomation	pep chromosome:IRGSP-1.0:5:11320504:11327124:-1 gene:Os05g0275700 transcript:Os05t0275700-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:RING finger protein OsRFPHC-15, RING-HC protein 15 description:Similar to Peroxisome assembly protein 2 (Peroxin-2) (AthPEX2) (Pex2p). (Os05t0275700-01)
Sequence	MTDPETLPSPSASTDSSSPPPDAWAAEYRRLLPQWESMRDSSKIAIPISISRVNQFDAAR LDVEMSAMLKEQLVKVFSLVKPGLLFQYEPELDAFLEFLIWRFSIWVDKPTPGNALMNLR YRDERAAPITGKEVRTGLEGPGLSVSQKVLYCISTVGGQYIWSRLQSFSAFRRWGDSEQR PLARRAWGLVQHAEGLYRASSFFNLLLFLYGARYKTIVERILKARLVYESPNMNRAVSFE YMNRQLVWNEFSEMLLLLLPLLNSSSVKKFLLPFSKDKSASSSGDEADCPICRSSPSIPF EALPCQHRYCYYCLQTRCAATNSYRCARCNEIVVAIQRQGSS

Transcript Sequence

Transcript ID	Os05t0275700-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:5:11320504:11327124:-1 gene:Os05g0275700 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:RING finger protein OsRFPHC-15, RING-HC protein 15 description:Similar to Peroxisome assembly protein 2 (Peroxin-2) (AthPEX2) (Pex2p). (Os05t0275700-01)
Sequence	ACTTTCCTCGATCGTCCGCGCGACACGCACCGCTGGTCCGCTGCCCGCTGCTCGTCCCAT CCACCCCCGCCTCTCCCACCGCCGGCGACGCGCCGTCCGCCCCTCTCGACCTCTCCCTCC TCCGCGCCGGCCGTCGCGTGCCCCCCCTTAACTACCAGGTGGGGCGGATCGGCCCGCCAC GCTCATCGGCTTCCTTCCCCGGAGGCGGGGATTTCTCGCGTCTGCTGTCGCTTCTCATGC TCGAGCTCGCATCACGCGTCCACCCGTGAGCTCCGCCCCCTATAATGACGGATCCCGAAA CCCTACCCTCTCCCTCCGCCTCCACTGACTCGTCGTCGCCACCACCGGATGCATGGGCCG CCGAGTACCGGAGACTCCTCCCTCAGTGGGAGTCAATGCGTGATTCATCCAAGATCGCTA TCCCAATTTCAATATCTAGAGTTAACCAATTTGATGCTGCGAGGCTTGATGTCGAGATGT CCGCCATGTTGAAAGAGCAGTTAGTCAAAGTATTCTCTTTGGTGAAGCCAGGACTCCTGT TCCAATATGAGCCAGAATTAGATGCTTTCCTTGAGTTCCTCATATGGAGATTCTCAATAT GGGTTGATAAGCCAACTCCTGGGAATGCGCTCATGAACCTGAGATATAGAGATGAACGGG CAGCGCCCATAACAGGAAAAGAAGTCAGAACAGGTTTGGAAGGACCTGGACTTTCAGTTT CTCAAAAGGTTTTGTATTGTATTAGCACTGTTGGTGGCCAATATATATGGTCCCGCTTGC AGTCTTTTTCTGCTTTCCGTCGATGGGGTGATTCTGAACAGAGACCACTAGCACGTCGCG CTTGGGGCTTGGTGCAGCATGCTGAAGGCTTATACAGAGCTTCTTCATTCTTTAACCTTT TGTTATTTCTTTATGGTGCAAGATATAAAACTATTGTTGAAAGGATTCTGAAAGCAAGAC TTGTTTATGAGAGCCCCAACATGAATAGGGCAGTAAGCTTTGAGTACATGAACCGGCAAC TGGTTTGGAATGAATTTTCGGAAATGTTGCTTTTGCTTCTTCCCCTCTTAAACTCATCCT CAGTAAAGAAGTTTCTTCTACCTTTCTCCAAAGATAAATCAGCAAGTTCTTCTGGCGATG AAGCAGACTGCCCTATATGTCGCTCCAGTCCTAGCATTCCCTTCGAAGCTCTCCCATGTC AACACAGGTATTGCTATTACTGCCTGCAAACACGTTGTGCAGCCACAAACTCGTATAGAT GTGCAAGGTGTAATGAGATTGTTGTTGCAATTCAAAGACAAGGATCAAGTTAGTTTAGAG TTGAATCCATATACATACAGTGTAACAAAAGCCAATACAGCTAACTGGATTCGCGACAAC TACACATGATTTTCTCCCAATCAACACGATTGGTTGTATTTACTCGCTGTTATATTTTGA ATTCCATGTTTGTATTATGTGGCAGCCGTATTGGGCGGATCTCTCTCTTATTTTTCGTGC AATATAGTTTTACCTTACAATCC