Gene sequences

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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os05t0272800-01
CDS Infomation	cds chromosome:IRGSP-1.0:5:11042638:11045689:1 gene:Os05g0272800 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to F20D23.27 protein. (Os05t0272800-01)
Sequence	ATGGCCGCCGCCGCCGCGGTCGCCTCCCTCCTCGGCTTCGTCCTCGCTCTCCCTTTCTGC TTGGCGGCGCCGTCCATCACAACGCATGGCAGCGACGGCGGCGGCGGCAGCTACGTGTCG GCGGTCGGGGACCCCGGCATGCGGCGCGACGGCCTCCACGTCGCCTGGGAGGCATGGAAC TTCTGTAACGAGGTCGGCCAGGAGGCCCCCGGCATGGGCAGCCCCCGCGGCGCCGACTGC TTCGACCTCGAGAATGGCGTGGACGAGAACGGCCAGCCGACGTACAAGGTGGTGCACCGG GTGACCGACGCCGACAACAACCTCCGCGCCGGCGACCCTCTCCCGGGCTCGCCGGCGAAC ATCACGGACGTCGACCTGTACGCGGCGGCGAAGGAGCTCTACCTGGGCGACCGGTGCCAG GTGCCCGACAGCCCGTCGCCGTGGCAGTTCTGGATGGTCATGCTCAAGAACGGCAACCTG GACACCACCGCCGCCATCTGCCCGGAGAACGGCCGCCCGGCGCGCCCGTTCTCGCAGACC TCGAGGTTCCCCTGCCCCGGCGGCGCCGGCTGCATGAACCAGCCGCTCGTGTTCCACAAC CGCACCGCGCTGGACGCCACGGCCCGGCGCCTCCGCGGCGGGCTGTTCGGCACGTACGAC CTCGACGCGGCGGACCTCGGCAGCAGAGAAGTGTCGTACTACTCGGTGACGTGGGAGAAG GACATCGGGAGCGGCGGCGACGGTGGGTGGGTGTTCCACCACAAGCTGCGCACTGCGCCC AAGTACCCGTGGCTGATGCTTTACCTCCGCTCCGACGCCACCAAGGGATTCTCCGGTGGA TACCACTACGACACCAGAGGCATGACCAAGATGGTGCCGGAATCACCAAACTTCAAGGTG AGGGTGACGCTGGAGGTGAAGCAAGGCGGAGGCCCCAACAGCCAGTTCTACCTCATGGAC ATGGGCAGCTGCTGGAAGAACGACGGCCGGCCGTGCGACGGCGACACCGCGACGGACGTG ACGCGGTACAGCGAGATGATCATCAACCCGGAGACGCCGTCGTGGTGCACGCGGAGGCGC ATCGAGGAGTGCCCGCCGTGGCACACGTTCCGGAACGGCACCCGCGTGCACCGCACCGAC GCGGCCCGCTTCCCCTACGCGGCGTACCACGTCTACTGCTCTCCCGGGAACGCGCGCGCC GCCGAGGAGCCGACCACCTACTGCGACGCGTACAGCAACCCGCAGCCGCAGGAGATCCTG CAGCTCGTGCCGCACCCGGTGTGGGGTGAGTTCGGCTACCCCACGGCGAAAGGCCAGGGG TGGATCGGTGACCCCAGGACATGGGAGCTCGACGTCGGAGCATTGTCGCAGGCGCTCTAC TTCTACCAGGATCCGGGCACGCCACCGGCGAAGAGGAGGTGGTCGTCGCTGGACGTCGGA ACGGAGATATACGTCAGCAAGTATGCGGAGGCAGAGTGGACGCTGAGTGGATTCGACATT GTTGTGCCGGAGGAATGCATTGGGTCGTCCCAAGGAGGACCCGTCAGTCGATGTTTGTAA

Peptide Sequence

PEP ID	Os05t0272800-01
PEP Infomation	pep chromosome:IRGSP-1.0:5:11042638:11045689:1 gene:Os05g0272800 transcript:Os05t0272800-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to F20D23.27 protein. (Os05t0272800-01)
Sequence	MAAAAAVASLLGFVLALPFCLAAPSITTHGSDGGGGSYVSAVGDPGMRRDGLHVAWEAWN FCNEVGQEAPGMGSPRGADCFDLENGVDENGQPTYKVVHRVTDADNNLRAGDPLPGSPAN ITDVDLYAAAKELYLGDRCQVPDSPSPWQFWMVMLKNGNLDTTAAICPENGRPARPFSQT SRFPCPGGAGCMNQPLVFHNRTALDATARRLRGGLFGTYDLDAADLGSREVSYYSVTWEK DIGSGGDGGWVFHHKLRTAPKYPWLMLYLRSDATKGFSGGYHYDTRGMTKMVPESPNFKV RVTLEVKQGGGPNSQFYLMDMGSCWKNDGRPCDGDTATDVTRYSEMIINPETPSWCTRRR IEECPPWHTFRNGTRVHRTDAARFPYAAYHVYCSPGNARAAEEPTTYCDAYSNPQPQEIL QLVPHPVWGEFGYPTAKGQGWIGDPRTWELDVGALSQALYFYQDPGTPPAKRRWSSLDVG TEIYVSKYAEAEWTLSGFDIVVPEECIGSSQGGPVSRCL

Transcript Sequence

Transcript ID	Os05t0272800-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:5:11042638:11045689:1 gene:Os05g0272800 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to F20D23.27 protein. (Os05t0272800-01)
Sequence	AGTACGCCTCTACCTGGACCCGCACAGTAGTCTGTTGTCGTCCTCGATCGGATCAGCTAC CGGCTTTCCGTTGATATCTCCGCGCTTGATGGCCGCCGCCGCCGCGGTCGCCTCCCTCCT CGGCTTCGTCCTCGCTCTCCCTTTCTGCTTGGCGGCGCCGTCCATCACAACGCATGGCAG CGACGGCGGCGGCGGCAGCTACGTGTCGGCGGTCGGGGACCCCGGCATGCGGCGCGACGG CCTCCACGTCGCCTGGGAGGCATGGAACTTCTGTAACGAGGTCGGCCAGGAGGCCCCCGG CATGGGCAGCCCCCGCGGCGCCGACTGCTTCGACCTCGAGAATGGCGTGGACGAGAACGG CCAGCCGACGTACAAGGTGGTGCACCGGGTGACCGACGCCGACAACAACCTCCGCGCCGG CGACCCTCTCCCGGGCTCGCCGGCGAACATCACGGACGTCGACCTGTACGCGGCGGCGAA GGAGCTCTACCTGGGCGACCGGTGCCAGGTGCCCGACAGCCCGTCGCCGTGGCAGTTCTG GATGGTCATGCTCAAGAACGGCAACCTGGACACCACCGCCGCCATCTGCCCGGAGAACGG CCGCCCGGCGCGCCCGTTCTCGCAGACCTCGAGGTTCCCCTGCCCCGGCGGCGCCGGCTG CATGAACCAGCCGCTCGTGTTCCACAACCGCACCGCGCTGGACGCCACGGCCCGGCGCCT CCGCGGCGGGCTGTTCGGCACGTACGACCTCGACGCGGCGGACCTCGGCAGCAGAGAAGT GTCGTACTACTCGGTGACGTGGGAGAAGGACATCGGGAGCGGCGGCGACGGTGGGTGGGT GTTCCACCACAAGCTGCGCACTGCGCCCAAGTACCCGTGGCTGATGCTTTACCTCCGCTC CGACGCCACCAAGGGATTCTCCGGTGGATACCACTACGACACCAGAGGCATGACCAAGAT GGTGCCGGAATCACCAAACTTCAAGGTGAGGGTGACGCTGGAGGTGAAGCAAGGCGGAGG CCCCAACAGCCAGTTCTACCTCATGGACATGGGCAGCTGCTGGAAGAACGACGGCCGGCC GTGCGACGGCGACACCGCGACGGACGTGACGCGGTACAGCGAGATGATCATCAACCCGGA GACGCCGTCGTGGTGCACGCGGAGGCGCATCGAGGAGTGCCCGCCGTGGCACACGTTCCG GAACGGCACCCGCGTGCACCGCACCGACGCGGCCCGCTTCCCCTACGCGGCGTACCACGT CTACTGCTCTCCCGGGAACGCGCGCGCCGCCGAGGAGCCGACCACCTACTGCGACGCGTA CAGCAACCCGCAGCCGCAGGAGATCCTGCAGCTCGTGCCGCACCCGGTGTGGGGTGAGTT CGGCTACCCCACGGCGAAAGGCCAGGGGTGGATCGGTGACCCCAGGACATGGGAGCTCGA CGTCGGAGCATTGTCGCAGGCGCTCTACTTCTACCAGGATCCGGGCACGCCACCGGCGAA GAGGAGGTGGTCGTCGCTGGACGTCGGAACGGAGATATACGTCAGCAAGTATGCGGAGGC AGAGTGGACGCTGAGTGGATTCGACATTGTTGTGCCGGAGGAATGCATTGGGTCGTCCCA AGGAGGACCCGTCAGTCGATGTTTGTAAAGTTGGTGATCAACGAGTTAATTAAGAAACAC TTATAGATTCATTATTGGAATAATATCGTGTTCCCTTCC