Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os05t0271900-01
CDS Infomation	cds chromosome:IRGSP-1.0:5:11000428:11002069:1 gene:Os05g0271900 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pentatricopeptide repeat domain containing protein. (Os05t0271900-01)
Sequence	ATGATCGCCCGCTCGAGACACGCTGCCTCGCTCGCAGCCGCAGCATGTGGGGGTACCTCC TCCGCCGCTCGCTCGTACGCCGGCCTCGACCTGCTCCTGCAGGAGAACTTCTCGGCCCCG CGCCGCGTCCTCCAGCTCCACGCCCTCCTCCTCACCTCCGGCGCGCTCTCCCTCCCGCAC CCCGACCCGGCCGCCACCGCCGCCTTCCCCTACAACTGCCTCATCCACGCCCACCTCCGC CTCCGCGGCTCCGCTTCTCCTCCATGGGGCCCCCTCCGGATCTTCTCCGCCATGCTCGCC CGCGGCGTCCGCCCCAACCGCCACACCTTCCCCTCCCTCCTCAAGTCTAGCGCCAGCTTC GACGCGGCCACCCCGACCCTCCACGCGCAGTGCCTCCGCCGCGGCCTAGACGAGGACCGC TTCGTCGCCTGCTCGCTCCTCAGCGCCTACGGCCGCGACGGCCATCTTGTGCGCGACGCG CGTAAGGTGTTCGACGATATGGCTAGTCCGGATTTGGCTACCTGTAATGCCATGCTTGAC GTGCTGTGTCTCTCCGGAGACATGTATGGTGCCCGCTGCTTATTTGATCGTATGGTGGTG AGGGATGTTGTATCGTGGACGACGATTATCTCTGGGTTAACGAGGATTGGGTGTCACTGG GATGCTGTTGAAATGTTCCGGGCATTTCTGCTGCAGAATAAGGGACGGCTTTCTGAGGCC ACACTGGTAAGCGTTCTTTCAGCTTGTGCTAATCTGGATGCTGTGGAGGGGCTTGCGGTT GGAATGGCTGTTCATGGGCATGTTGTTCGCCATGAGGTTCAGTTCACTGCGTTCTTGGGC ACAGCACTCATCGACATGTATGGTAAGTATGGGAAGCTTAGCTGTTGTAGCCATATCTTT CATTTGGTAAGAGACAAGGAGGTTTGTACGTGGAATGCACTGTTGTCTGCATTGGCTAAT CATGGGAAGGAGGCTGAAGCACTGGTTAAGTTTGAGATGATGAGGAGTGAAGGGTTCTTG CCAAATCATATTACATTCGTTGCTGTAATGACAGCCTGTGCTCGCGCAGGATTGGTGGAG ACTGGCTTAGACTTCTTCGAAGAGTTGTTTACTGAATATAAGGTCATTCCAATGATGGTG CATTATGGGTGTGTGGTAGATCTTTTAGGCCGTGCTGGTCGTTTTCTGGAGGCAATTCAG ATTATAGAGAGGATGCCATTTATGGCTGATGATTCTGTGTGGGGTGCACTTCTTGGGGCT TGCAAGATCCATGGCAATATAGAGCTTTCTGCCCAGATCAGGGAGAAACTAATAGTTCTT GGTGGTCAGCAACCTGGACGGTATGTGACTGTTAGGAACATGTATTTAGAAGAAGGGAAC TGGTATGCTGCCACTAGAATGGGAGAGGTGATGCAGGAGGCTGGTATTAAGAAGATAGTG GGTATGAGCAGTGTTGTGCTTAATTGA

Peptide Sequence

PEP ID	Os05t0271900-01
PEP Infomation	pep chromosome:IRGSP-1.0:5:11000428:11002069:1 gene:Os05g0271900 transcript:Os05t0271900-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pentatricopeptide repeat domain containing protein. (Os05t0271900-01)
Sequence	MIARSRHAASLAAAACGGTSSAARSYAGLDLLLQENFSAPRRVLQLHALLLTSGALSLPH PDPAATAAFPYNCLIHAHLRLRGSASPPWGPLRIFSAMLARGVRPNRHTFPSLLKSSASF DAATPTLHAQCLRRGLDEDRFVACSLLSAYGRDGHLVRDARKVFDDMASPDLATCNAMLD VLCLSGDMYGARCLFDRMVVRDVVSWTTIISGLTRIGCHWDAVEMFRAFLLQNKGRLSEA TLVSVLSACANLDAVEGLAVGMAVHGHVVRHEVQFTAFLGTALIDMYGKYGKLSCCSHIF HLVRDKEVCTWNALLSALANHGKEAEALVKFEMMRSEGFLPNHITFVAVMTACARAGLVE TGLDFFEELFTEYKVIPMMVHYGCVVDLLGRAGRFLEAIQIIERMPFMADDSVWGALLGA CKIHGNIELSAQIREKLIVLGGQQPGRYVTVRNMYLEEGNWYAATRMGEVMQEAGIKKIV GMSSVVLN

Transcript Sequence

Transcript ID	Os05t0271900-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:5:11000428:11002069:1 gene:Os05g0271900 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pentatricopeptide repeat domain containing protein. (Os05t0271900-01)
Sequence	ATGATGCCGCAGCGCCGCCTCGCCGCGCGCCACCGCCGCCCGCCTGCCCCCAGGTAGCGT TACATGATCGCCCGCTCGAGACACGCTGCCTCGCTCGCAGCCGCAGCATGTGGGGGTACC TCCTCCGCCGCTCGCTCGTACGCCGGCCTCGACCTGCTCCTGCAGGAGAACTTCTCGGCC CCGCGCCGCGTCCTCCAGCTCCACGCCCTCCTCCTCACCTCCGGCGCGCTCTCCCTCCCG CACCCCGACCCGGCCGCCACCGCCGCCTTCCCCTACAACTGCCTCATCCACGCCCACCTC CGCCTCCGCGGCTCCGCTTCTCCTCCATGGGGCCCCCTCCGGATCTTCTCCGCCATGCTC GCCCGCGGCGTCCGCCCCAACCGCCACACCTTCCCCTCCCTCCTCAAGTCTAGCGCCAGC TTCGACGCGGCCACCCCGACCCTCCACGCGCAGTGCCTCCGCCGCGGCCTAGACGAGGAC CGCTTCGTCGCCTGCTCGCTCCTCAGCGCCTACGGCCGCGACGGCCATCTTGTGCGCGAC GCGCGTAAGGTGTTCGACGATATGGCTAGTCCGGATTTGGCTACCTGTAATGCCATGCTT GACGTGCTGTGTCTCTCCGGAGACATGTATGGTGCCCGCTGCTTATTTGATCGTATGGTG GTGAGGGATGTTGTATCGTGGACGACGATTATCTCTGGGTTAACGAGGATTGGGTGTCAC TGGGATGCTGTTGAAATGTTCCGGGCATTTCTGCTGCAGAATAAGGGACGGCTTTCTGAG GCCACACTGGTAAGCGTTCTTTCAGCTTGTGCTAATCTGGATGCTGTGGAGGGGCTTGCG GTTGGAATGGCTGTTCATGGGCATGTTGTTCGCCATGAGGTTCAGTTCACTGCGTTCTTG GGCACAGCACTCATCGACATGTATGGTAAGTATGGGAAGCTTAGCTGTTGTAGCCATATC TTTCATTTGGTAAGAGACAAGGAGGTTTGTACGTGGAATGCACTGTTGTCTGCATTGGCT AATCATGGGAAGGAGGCTGAAGCACTGGTTAAGTTTGAGATGATGAGGAGTGAAGGGTTC TTGCCAAATCATATTACATTCGTTGCTGTAATGACAGCCTGTGCTCGCGCAGGATTGGTG GAGACTGGCTTAGACTTCTTCGAAGAGTTGTTTACTGAATATAAGGTCATTCCAATGATG GTGCATTATGGGTGTGTGGTAGATCTTTTAGGCCGTGCTGGTCGTTTTCTGGAGGCAATT CAGATTATAGAGAGGATGCCATTTATGGCTGATGATTCTGTGTGGGGTGCACTTCTTGGG GCTTGCAAGATCCATGGCAATATAGAGCTTTCTGCCCAGATCAGGGAGAAACTAATAGTT CTTGGTGGTCAGCAACCTGGACGGTATGTGACTGTTAGGAACATGTATTTAGAAGAAGGG AACTGGTATGCTGCCACTAGAATGGGAGAGGTGATGCAGGAGGCTGGTATTAAGAAGATA GTGGGTATGAGCAGTGTTGTGCTTAATTGAGTTAATTCTATCACATGAAGTAGTAGTTAT ATTATTCATCGGATTAGATGTTTGTAAGAACAGAATAGGTATGATGTTACTTCTAGATGT TGGAATTAATTTGTCATTTGGG