Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os05t0270800-00
CDS Infomation

cds chromosome:IRGSP-1.0:5:10914088:10916007:1 gene:Os05g0270800 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to glycinamide ribonucleotide transformylase. (Os05t0270800-00)
Sequence

ATGGAGGCGTCCGTCGCTTCTACTGGCTCCGGCCTGCGCTGCTCCCCCAATCCGATGCCT
AAGCAGCAGCACGAGCGGCGAAGCGGCCGCCCCATCCGGATGCTCACGCCTATGCGGCGG
TGGGGGCGGGGGCGAAGGGGGGGTGAGGCTAGGGGTGTCGGGGTGGAGAGGAAGAGGCTC
GTGGTGTTCGTGTCCGGTGGGGGATCCAACTTCCGGGCGATCCACGATGCCGCTCTGGGT
GGGGACGTGAATGGCGTTGTGGTTGCGTTGGTTACCGATAAACCAGGCTGTGGAGGAGCA
GAGCATGCGAGGGGTAATGGCATACCGGTCGTTGTGTTCCCTAAGTTGAAGTCTGCTCCA
GAGGGGGTATCTACTGATGAGCTGTTGAATGGTCTGAGGGAACTCAGGGTAGACTTCATT
CTACTTGCTGGCTACCTGAAGCTTATACCGGTTGAGCTAGTTCAGGCATATCCAAAATCC
ATTTTGAATATTCACCCTTCACTACTCCCGGCATTTGGAGGCAAAGGTTATTATGGTTTG
AAGGTGCATAAAGCAGTCATCGCATCAGGAGCCAGGTACTCGGGTCCAACTGTGCACTTT
GTGGATGAGCACTATGACACAGGAAGGACTCTAGCCCAAAGGGTTGTACCTGTGCAAGCC
AATGATACTCCAGAGCAATTGGCTACAAGAGTCCTTCATGAGGAACATCAGGTTTATGTT
GAGGCAGTTACTGCCCTATGTGAGGACCGAATTGTGTGGAGAGAAGATGGTATCCCACTT
ATTAGAAGCCAGACAAATCCCGATGAGTACACTTAA

Peptide Sequence

PEP ID

Os05t0270800-00
PEP Infomation

pep chromosome:IRGSP-1.0:5:10914088:10916007:1 gene:Os05g0270800 transcript:Os05t0270800-00 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to glycinamide ribonucleotide transformylase. (Os05t0270800-00)
Sequence

MEASVASTGSGLRCSPNPMPKQQHERRSGRPIRMLTPMRRWGRGRRGGEARGVGVERKRL
VVFVSGGGSNFRAIHDAALGGDVNGVVVALVTDKPGCGGAEHARGNGIPVVVFPKLKSAP
EGVSTDELLNGLRELRVDFILLAGYLKLIPVELVQAYPKSILNIHPSLLPAFGGKGYYGL
KVHKAVIASGARYSGPTVHFVDEHYDTGRTLAQRVVPVQANDTPEQLATRVLHEEHQVYV
EAVTALCEDRIVWREDGIPLIRSQTNPDEYT

Transcript Sequence

Transcript ID

Os05t0270800-00
Transcript Infomation

cdna chromosome:IRGSP-1.0:5:10914088:10916007:1 gene:Os05g0270800 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to glycinamide ribonucleotide transformylase. (Os05t0270800-00)
Sequence

ATGGAGGCGTCCGTCGCTTCTACTGGCTCCGGCCTGCGCTGCTCCCCCAATCCGATGCCT
AAGCAGCAGCACGAGCGGCGAAGCGGCCGCCCCATCCGGATGCTCACGCCTATGCGGCGG
TGGGGGCGGGGGCGAAGGGGGGGTGAGGCTAGGGGTGTCGGGGTGGAGAGGAAGAGGCTC
GTGGTGTTCGTGTCCGGTGGGGGATCCAACTTCCGGGCGATCCACGATGCCGCTCTGGGT
GGGGACGTGAATGGCGTTGTGGTTGCGTTGGTTACCGATAAACCAGGCTGTGGAGGAGCA
GAGCATGCGAGGGGTAATGGCATACCGGTCGTTGTGTTCCCTAAGTTGAAGTCTGCTCCA
GAGGGGGTATCTACTGATGAGCTGTTGAATGGTCTGAGGGAACTCAGGGTAGACTTCATT
CTACTTGCTGGCTACCTGAAGCTTATACCGGTTGAGCTAGTTCAGGCATATCCAAAATCC
ATTTTGAATATTCACCCTTCACTACTCCCGGCATTTGGAGGCAAAGGTTATTATGGTTTG
AAGGTGCATAAAGCAGTCATCGCATCAGGAGCCAGGTACTCGGGTCCAACTGTGCACTTT
GTGGATGAGCACTATGACACAGGAAGGACTCTAGCCCAAAGGGTTGTACCTGTGCAAGCC
AATGATACTCCAGAGCAATTGGCTACAAGAGTCCTTCATGAGGAACATCAGGTTTATGTT
GAGGCAGTTACTGCCCTATGTGAGGACCGAATTGTGTGGAGAGAAGATGGTATCCCACTT
ATTAGAAGCCAGACAAATCCCGATGAGTACACTTAA