Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os05t0270200-01
CDS Infomation	cds chromosome:IRGSP-1.0:5:10883466:10886687:-1 gene:Os05g0270200 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:OsSAD1 description:Similar to Sad1-unc84-like protein. (Os05t0270200-01)
Sequence	TTCTCCCGTTTGTACCTTGAGGGGACAACAATGTCAGTCTCAACTGCTGCGGTTCCAACC GCAAATACAAATGGGAACCACGCGTTGAGTATGGACTCACATTCCAGCCAAGATGTTAGG CGGCGGACGGTAGTTGTTGCAAGGAAGAAAGCCTCACCTGAGCTCCTTGCTGATGGTGGA TTCAATGGTACCTCATCAGTTGATAAGATCACTGACAAGAAGGATCTTAGTCATACTATC CGTGGAGAGTCAGTTCTTGGCAAATCAAAGTATCCATTGGAGGCAAGAAAAGATGCAATT GCCTCTGCAGCTGCTGCTGACCGTCAAAAGAAGAGTGGTGCTAAGCAAGAAAAGGCCAAG TGGGAAATCGCTCTAAGTGTGTTGATGAAACTTTGCCTTCTCATTTCGGCTGTCGCTTGG ATGGGGCAGCTGTTCTGGAGATGGCAAAATGGTGATTTATCATTTACAACACTGGATATG GAGAGCAGGCTGTCCAAAGTGGAAGGGTTCAAGAAGACAACCAAGATGCTTCAGGTACAG CTGGATATTTTAGACAAGAAGCTAGGAAATGAGATTGACAAAACAAGGAGGGACATCACG AAGCAATTCGAAGACAAGGGTAATAAGCTGGAGATTAAGATGAAGGCACTAGAAGGCAAG ACTGACAAATTAGATAAATCACTTGCTGAGCTTAGGGACATGGGTTTTGTTTCTAAAAAA GAATTTGATGAGATTGTGGAACAGTTGAAGAAAAAGAAGGGTTTGGATGGTACTGTTGGC GACATAAGCTTGGATGATATTAGGTTATTTGCCAAGGAGATAGTTGAGATGGAGATAGAG AGGCATGCAGCAGATGGCCTTGGAATGGTGGATTATGCATTAGCATCTGGTGGGGGTAAA GTGGTTAAGCATTCGGAAGCTTTCAGGAAAGCTAAGAGCTTTATGCCTAGTCGTAATAGT TTGCTTGAACAAGCTAAGAAAATGCTGGAGCCAAGTTTTGGCCAGCCTGGAGAGTGCTTT GCACTACAAGGAAGTAGTGGTTATGTGGAGATCAAGCTGAGGACAGGAATAATTCCTGAA GCAGTAAGTCTAGAGCATGTGGACAAGAGTGTAGCTTATGATCGATCTAGTGCTCCGAAG GATTTCCAGGTCAGTGGATGGTATGAAGGACCAGAGGATGATTCAGACAAGGAATCACGT GTGGTGACAAATCTAGGAGAGTTTTCTTATGACCTTGAGAAGAACAATGCACAGACCTTC CAACTGGAGAGAACCGCAGATTCACGAGTCATCAACATGGTTCGGCTTGACTTCTGCTCA AACCATGGAAATTCAGAACTGACATGCATCTATCGCTTCAGGGTGCATGGTAGAGAACCT GGCTCTCCTTAA

Peptide Sequence

PEP ID	Os05t0270200-01
PEP Infomation	pep chromosome:IRGSP-1.0:5:10883466:10886687:-1 gene:Os05g0270200 transcript:Os05t0270200-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:OsSAD1 description:Similar to Sad1-unc84-like protein. (Os05t0270200-01)
Sequence	FSRLYLEGTTMSVSTAAVPTANTNGNHALSMDSHSSQDVRRRTVVVARKKASPELLADGG FNGTSSVDKITDKKDLSHTIRGESVLGKSKYPLEARKDAIASAAAADRQKKSGAKQEKAK WEIALSVLMKLCLLISAVAWMGQLFWRWQNGDLSFTTLDMESRLSKVEGFKKTTKMLQVQ LDILDKKLGNEIDKTRRDITKQFEDKGNKLEIKMKALEGKTDKLDKSLAELRDMGFVSKK EFDEIVEQLKKKKGLDGTVGDISLDDIRLFAKEIVEMEIERHAADGLGMVDYALASGGGK VVKHSEAFRKAKSFMPSRNSLLEQAKKMLEPSFGQPGECFALQGSSGYVEIKLRTGIIPE AVSLEHVDKSVAYDRSSAPKDFQVSGWYEGPEDDSDKESRVVTNLGEFSYDLEKNNAQTF QLERTADSRVINMVRLDFCSNHGNSELTCIYRFRVHGREPGSP

Transcript Sequence

Transcript ID	Os05t0270200-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:5:10883466:10886687:-1 gene:Os05g0270200 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:OsSAD1 description:Similar to Sad1-unc84-like protein. (Os05t0270200-01)
Sequence	AGTAACAGCGTAAATCCCGTTCCCTTGGCCCTTGGGCCTCGCCGCCTCGACTCCCGTCTC CTCGCCCGGCCGGCGGCCGCCCGTCGCCTGCGCCGATCTACAACCCGCGAGCAGCGGTCC CACTGCTTCCGCCGCCGGTGGCGGTGAGGTGCATCATTGCTTCCAGCTTATATCATCTAG TTCTCCCGTTTGTACCTTGAGGGGACAACAATGTCAGTCTCAACTGCTGCGGTTCCAACC GCAAATACAAATGGGAACCACGCGTTGAGTATGGACTCACATTCCAGCCAAGATGTTAGG CGGCGGACGGTAGTTGTTGCAAGGAAGAAAGCCTCACCTGAGCTCCTTGCTGATGGTGGA TTCAATGGTACCTCATCAGTTGATAAGATCACTGACAAGAAGGATCTTAGTCATACTATC CGTGGAGAGTCAGTTCTTGGCAAATCAAAGTATCCATTGGAGGCAAGAAAAGATGCAATT GCCTCTGCAGCTGCTGCTGACCGTCAAAAGAAGAGTGGTGCTAAGCAAGAAAAGGCCAAG TGGGAAATCGCTCTAAGTGTGTTGATGAAACTTTGCCTTCTCATTTCGGCTGTCGCTTGG ATGGGGCAGCTGTTCTGGAGATGGCAAAATGGTGATTTATCATTTACAACACTGGATATG GAGAGCAGGCTGTCCAAAGTGGAAGGGTTCAAGAAGACAACCAAGATGCTTCAGGTACAG CTGGATATTTTAGACAAGAAGCTAGGAAATGAGATTGACAAAACAAGGAGGGACATCACG AAGCAATTCGAAGACAAGGGTAATAAGCTGGAGATTAAGATGAAGGCACTAGAAGGCAAG ACTGACAAATTAGATAAATCACTTGCTGAGCTTAGGGACATGGGTTTTGTTTCTAAAAAA GAATTTGATGAGATTGTGGAACAGTTGAAGAAAAAGAAGGGTTTGGATGGTACTGTTGGC GACATAAGCTTGGATGATATTAGGTTATTTGCCAAGGAGATAGTTGAGATGGAGATAGAG AGGCATGCAGCAGATGGCCTTGGAATGGTGGATTATGCATTAGCATCTGGTGGGGGTAAA GTGGTTAAGCATTCGGAAGCTTTCAGGAAAGCTAAGAGCTTTATGCCTAGTCGTAATAGT TTGCTTGAACAAGCTAAGAAAATGCTGGAGCCAAGTTTTGGCCAGCCTGGAGAGTGCTTT GCACTACAAGGAAGTAGTGGTTATGTGGAGATCAAGCTGAGGACAGGAATAATTCCTGAA GCAGTAAGTCTAGAGCATGTGGACAAGAGTGTAGCTTATGATCGATCTAGTGCTCCGAAG GATTTCCAGGTCAGTGGATGGTATGAAGGACCAGAGGATGATTCAGACAAGGAATCACGT GTGGTGACAAATCTAGGAGAGTTTTCTTATGACCTTGAGAAGAACAATGCACAGACCTTC CAACTGGAGAGAACCGCAGATTCACGAGTCATCAACATGGTTCGGCTTGACTTCTGCTCA AACCATGGAAATTCAGAACTGACATGCATCTATCGCTTCAGGGTGCATGGTAGAGAACCT GGCTCTCCTTAAGCTGCTGCAGTGAAAGCCTGATCTGAGAGCTGCATGCCTGAGTTTGAC AACATCCTCAGGCTTCAATATACCCAGTAAGACAATGATTCTAGTCCACTGGATTGACTG TTAGAAGATAGAAGTGTGGTGCGGCTCCATCTGACTCAGGTTGATTTTACTCTGTATCAT AATGCCATGAAAATATGCTGACTCGCAGTTCTGCTAGCTAGATGTCACACTTGTTTGTAT CTGCTCACTCTGATAGTCTGATTGCTCTTTGGTATGGTTGTATTGTAATTGGTAGCTATC CTGTTATTTACAACTTTAGTTTATTGGGGTGTATTCATTCGGTGACTCGTGGGCATGGAG GT