Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os05t0264200-00
CDS Infomation

cds chromosome:IRGSP-1.0:5:10337232:10344492:1 gene:Os05g0264200 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein of unknown function DUF639 domain containing protein. (Os05t0264200-00)
Sequence

ATGGCGATGATGAACCGGACGCGGGATCTGCTGATGGAGGGGTTCGAGGGCCTCGTGCGG
GAGGGCTCCTTCACCTGGGGCCTCCCCCGCCGCGGGGCTTCGCCGGTGGGCGACGGCGAT
GACCCCGACAGCTCGTCCTCCTCCGGCAAGCAGGCCTCCGTCTCCGGCCTCTCCCCCAAG
GCCAACGCCGTCGTCTCTCGATGCGCCCGGGTACTTGGTACTTCCACGGATGAGCTTCGA
TATGACTTTGATATGCAAGCATCTGATTCCATAAAGCAGCAAATAAATTATGCAAGAAAT
TTTTTGGAATATTGTTGTTTGAGGGCACTTGCACAGGCCTCACAAATTGCAGGGTATCTT
TCTGACAAAAGCTTTCGTCGCCTGAATTTTGATATGATGCTAGCTTGGGAGGTTCCCTCT
TCTTCAAGCCAGCTCACTGTTAAGGTTGAAGTAGAGAGCACAGTCAGTTTAGAGGCTTTT
TCAAGAATAGCACCTGCAATTCCAACAATCACTGATGTGGTAACATGTTCAAATCTATTT
GATGTACTTTCATCATCAAGTGGAGGCCGGCTTACATTTCCAGTATATGATAAGTACCTT
ACAGGATTGGACAGAGCGATTAAGAAAATGAAAGGACAATCCGAGTCCTCGCTATTATCT
GGCCAGCGGTCTCAGAGAGGAGAAAGGATTGTAGAAATAGATGGAACATTGACGACTCAA
CCAGTACTTGAACATGTTAGGATTTCGACATGGCCAGGAAGGTTAACACTTACTGATCAT
GCTCTTTACTTCGAAGCACTTCGGGTTGTGACCTATGATAAGCCTAAAGCTTATGAGCTT
GCTGAAGATCTAAAGCAGTCTGTTAAACCTGAGCTGACTGGTCCATGGGGCTCACGGCTA
TTTGACAAAGCTGTTATGTATAAATCAGCAACTTTAACAGAACCAGTGATCTTAGAATTT
CCAGAGTTGGCTGGCCACTTTCGTCGTGACTATTGGCTGGCCATTATATCAGAAATTCTT
TGTGTCCACAGATTTGTTAGGAAGTTTGACATAAGTGGAATTGACAAAGAGGAAACAATT
TTGAAAGCTGTACTAAGCATTCTGCGGCTACAAGCTATTGAAGAGTTAGCCATTCCAGTT
TCTAATCGATTCGAGTCTCTTTTGATGTTTAATCTATGTGACAAACTTCCTGGAGGTGAT
GTAATACTTGAAACACTAGCTGGTTCTATATCATTGAGAAGATCAGCTCAAGTTAACCAA
CCTGGCATTAGCAGTGCAAGGCATTCAATGTCCCCATTTACTGTTCTGTCGAATCTTGGA
GTGGTATCACCAATTAATAAGGGTGAGAGACTCTTTGTTGGCGAGATAGTTGTTGGGGAA
ATGAGTGCCTTGCAGAAGGTAGTTACTGAGTCAATGAACAACTATAAGAAGGTTGAATTG
GCCCAAGCCACAGTTGATGGAGTCAAAGTTGATGGCCTAGATACAAACTTGGCAGTGATG
AAGATAGCCTGA

Peptide Sequence

PEP ID

Os05t0264200-00
PEP Infomation

pep chromosome:IRGSP-1.0:5:10337232:10344492:1 gene:Os05g0264200 transcript:Os05t0264200-00 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein of unknown function DUF639 domain containing protein. (Os05t0264200-00)
Sequence

MAMMNRTRDLLMEGFEGLVREGSFTWGLPRRGASPVGDGDDPDSSSSSGKQASVSGLSPK
ANAVVSRCARVLGTSTDELRYDFDMQASDSIKQQINYARNFLEYCCLRALAQASQIAGYL
SDKSFRRLNFDMMLAWEVPSSSSQLTVKVEVESTVSLEAFSRIAPAIPTITDVVTCSNLF
DVLSSSSGGRLTFPVYDKYLTGLDRAIKKMKGQSESSLLSGQRSQRGERIVEIDGTLTTQ
PVLEHVRISTWPGRLTLTDHALYFEALRVVTYDKPKAYELAEDLKQSVKPELTGPWGSRL
FDKAVMYKSATLTEPVILEFPELAGHFRRDYWLAIISEILCVHRFVRKFDISGIDKEETI
LKAVLSILRLQAIEELAIPVSNRFESLLMFNLCDKLPGGDVILETLAGSISLRRSAQVNQ
PGISSARHSMSPFTVLSNLGVVSPINKGERLFVGEIVVGEMSALQKVVTESMNNYKKVEL
AQATVDGVKVDGLDTNLAVMKIA

Transcript Sequence

Transcript ID

Os05t0264200-00
Transcript Infomation

cdna chromosome:IRGSP-1.0:5:10337232:10344492:1 gene:Os05g0264200 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein of unknown function DUF639 domain containing protein. (Os05t0264200-00)
Sequence

ATGGCGATGATGAACCGGACGCGGGATCTGCTGATGGAGGGGTTCGAGGGCCTCGTGCGG
GAGGGCTCCTTCACCTGGGGCCTCCCCCGCCGCGGGGCTTCGCCGGTGGGCGACGGCGAT
GACCCCGACAGCTCGTCCTCCTCCGGCAAGCAGGCCTCCGTCTCCGGCCTCTCCCCCAAG
GCCAACGCCGTCGTCTCTCGATGCGCCCGGGTACTTGGTACTTCCACGGATGAGCTTCGA
TATGACTTTGATATGCAAGCATCTGATTCCATAAAGCAGCAAATAAATTATGCAAGAAAT
TTTTTGGAATATTGTTGTTTGAGGGCACTTGCACAGGCCTCACAAATTGCAGGGTATCTT
TCTGACAAAAGCTTTCGTCGCCTGAATTTTGATATGATGCTAGCTTGGGAGGTTCCCTCT
TCTTCAAGCCAGCTCACTGTTAAGGTTGAAGTAGAGAGCACAGTCAGTTTAGAGGCTTTT
TCAAGAATAGCACCTGCAATTCCAACAATCACTGATGTGGTAACATGTTCAAATCTATTT
GATGTACTTTCATCATCAAGTGGAGGCCGGCTTACATTTCCAGTATATGATAAGTACCTT
ACAGGATTGGACAGAGCGATTAAGAAAATGAAAGGACAATCCGAGTCCTCGCTATTATCT
GGCCAGCGGTCTCAGAGAGGAGAAAGGATTGTAGAAATAGATGGAACATTGACGACTCAA
CCAGTACTTGAACATGTTAGGATTTCGACATGGCCAGGAAGGTTAACACTTACTGATCAT
GCTCTTTACTTCGAAGCACTTCGGGTTGTGACCTATGATAAGCCTAAAGCTTATGAGCTT
GCTGAAGATCTAAAGCAGTCTGTTAAACCTGAGCTGACTGGTCCATGGGGCTCACGGCTA
TTTGACAAAGCTGTTATGTATAAATCAGCAACTTTAACAGAACCAGTGATCTTAGAATTT
CCAGAGTTGGCTGGCCACTTTCGTCGTGACTATTGGCTGGCCATTATATCAGAAATTCTT
TGTGTCCACAGATTTGTTAGGAAGTTTGACATAAGTGGAATTGACAAAGAGGAAACAATT
TTGAAAGCTGTACTAAGCATTCTGCGGCTACAAGCTATTGAAGAGTTAGCCATTCCAGTT
TCTAATCGATTCGAGTCTCTTTTGATGTTTAATCTATGTGACAAACTTCCTGGAGGTGAT
GTAATACTTGAAACACTAGCTGGTTCTATATCATTGAGAAGATCAGCTCAAGTTAACCAA
CCTGGCATTAGCAGTGCAAGGCATTCAATGTCCCCATTTACTGTTCTGTCGAATCTTGGA
GTGGTATCACCAATTAATAAGGGTGAGAGACTCTTTGTTGGCGAGATAGTTGTTGGGGAA
ATGAGTGCCTTGCAGAAGGTAGTTACTGAGTCAATGAACAACTATAAGAAGGTTGAATTG
GCCCAAGCCACAGTTGATGGAGTCAAAGTTGATGGCCTAGATACAAACTTGGCAGTGATG
AAGATAGCCTGA