Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os05t0250000-00
CDS Infomation

cds chromosome:IRGSP-1.0:5:9128120:9129772:-1 gene:Os05g0250000 gene_biotype:protein_coding transcript_biotype:protein_coding description:Domain of unknown function DUF1618 domain containing protein. (Os05t0250000-00)
Sequence

ATGCAGCGCCTCCCGCTCCGGCGCGCCCTGTCCGCCGCCGCGTCCGCGCCCGTACGCCGC
GCCCTCTCCACGGCGTCGCGGCGCCCTCCGTGGGCGATGGTGGAGAAGTACGTGGCGGTC
GGATCTCCCGAGCGGCGCGTATCCCTCCGGCTCGCGGAGCCCCCGTGCGGCTCCAGGCTC
ATCGCCCCCGCCCACCTCGTCGGCTACGCGCCGCGCGTGCCCGACCCCGACACGGACGAG
CTGAACGCCTTCTTCGCCGGCTTCGTCAAGGCCGCGAGCGGCGACGGCCTCCTCCTCCTC
ACCTTCATGGAAGTCACCGGCACGGCCCCCCTCGTCCCCGGCGGCGGTGGGTGGCGCGCG
CTGACTGGCATCAGCATCGACCCCGACATGACGCGGTTCGTGTGCAACCCCATCTCCGGC
GAGCTGTTCGGCCTCCCGGACATCGACGGCACCAAGAAGACCGCGTGGTTCTCCGACATC
GGCATCCTCACCCAATCCGAACGCCCGCACGGGCCGCCGGACAGGTATGCCGTCGCTTTG
TTCAGGGAGGACTCGGTGGGCTACCGCGGCGGGGACGAACGGTTCGCCATGCGCCGGTTT
CTCTCACAAACGGGCAAGTGGGACAAGCTGGTGGGCTTGCCGTCCTCGCTCCCGCTCCAC
CGGCGTCGCATGAACACATCCACGCAGGAGGTGGTGGCCTTCGCCGGCCGGCTGTGGTGG
GTCGACCTGAGCTGGGGCGCCCTCTCCGCCGACCCTTTCAGCGATCGCCCGGAGCTCCGC
TTCGTCGAGCTGCCGAGAGGCAGCGTGACACAGCCCATGGAGAAGGAGCGCCGGGAGCTG
CGCAGGTTCCGCCGCGTCGGCGTCAGCGAGGGGAGGCTGCGCTACGCCGAGGTGTCCCAG
GAGGAGCCATACGTGCTCAGTTCGTTCGCCCTCGACGACGACGGCGGCGGGTGGACGCTG
GAGCACCGCGTGGCTCTTAGCCGGCTCTGGCCGCATGACCAAAACCTCTGCAAGAACACG
CCGCAGATCGCAGCCATTGACCCACTGAACGCTGGCTGCATGCACCTCGTAGTTGGCAGG
CAGGTTGTCTCCATAGACATGGACAATGGGGATTTGCTTGGGTGCACGCTGGGAGGTGGA
AGTGATCCATCCGTGGATACACTTACACCATGTTTGCTCCCTCCGTGGCTTGCATCGTGC
CGGATCCCCCGTGCAGAAACTCTTTCAAGGAACAAGGCGGATGCGAAAAGCAAGAGTTTA
TCAGACATGTTGGTTCGTGTAGATAGGAAGAAGATGACTTGA

Peptide Sequence

PEP ID

Os05t0250000-00
PEP Infomation

pep chromosome:IRGSP-1.0:5:9128120:9129772:-1 gene:Os05g0250000 transcript:Os05t0250000-00 gene_biotype:protein_coding transcript_biotype:protein_coding description:Domain of unknown function DUF1618 domain containing protein. (Os05t0250000-00)
Sequence

MQRLPLRRALSAAASAPVRRALSTASRRPPWAMVEKYVAVGSPERRVSLRLAEPPCGSRL
IAPAHLVGYAPRVPDPDTDELNAFFAGFVKAASGDGLLLLTFMEVTGTAPLVPGGGGWRA
LTGISIDPDMTRFVCNPISGELFGLPDIDGTKKTAWFSDIGILTQSERPHGPPDRYAVAL
FREDSVGYRGGDERFAMRRFLSQTGKWDKLVGLPSSLPLHRRRMNTSTQEVVAFAGRLWW
VDLSWGALSADPFSDRPELRFVELPRGSVTQPMEKERRELRRFRRVGVSEGRLRYAEVSQ
EEPYVLSSFALDDDGGGWTLEHRVALSRLWPHDQNLCKNTPQIAAIDPLNAGCMHLVVGR
QVVSIDMDNGDLLGCTLGGGSDPSVDTLTPCLLPPWLASCRIPRAETLSRNKADAKSKSL
SDMLVRVDRKKMT

Transcript Sequence

Transcript ID

Os05t0250000-00
Transcript Infomation

cdna chromosome:IRGSP-1.0:5:9128120:9129772:-1 gene:Os05g0250000 gene_biotype:protein_coding transcript_biotype:protein_coding description:Domain of unknown function DUF1618 domain containing protein. (Os05t0250000-00)
Sequence

GCTAGGCTAGGCTACGCTCGCCACGATACGCGCGCCGCCTCCGCCCAAAGATGCAGCGCC
TCCCGCTCCGGCGCGCCCTGTCCGCCGCCGCGTCCGCGCCCGTACGCCGCGCCCTCTCCA
CGGCGTCGCGGCGCCCTCCGTGGGCGATGGTGGAGAAGTACGTGGCGGTCGGATCTCCCG
AGCGGCGCGTATCCCTCCGGCTCGCGGAGCCCCCGTGCGGCTCCAGGCTCATCGCCCCCG
CCCACCTCGTCGGCTACGCGCCGCGCGTGCCCGACCCCGACACGGACGAGCTGAACGCCT
TCTTCGCCGGCTTCGTCAAGGCCGCGAGCGGCGACGGCCTCCTCCTCCTCACCTTCATGG
AAGTCACCGGCACGGCCCCCCTCGTCCCCGGCGGCGGTGGGTGGCGCGCGCTGACTGGCA
TCAGCATCGACCCCGACATGACGCGGTTCGTGTGCAACCCCATCTCCGGCGAGCTGTTCG
GCCTCCCGGACATCGACGGCACCAAGAAGACCGCGTGGTTCTCCGACATCGGCATCCTCA
CCCAATCCGAACGCCCGCACGGGCCGCCGGACAGGTATGCCGTCGCTTTGTTCAGGGAGG
ACTCGGTGGGCTACCGCGGCGGGGACGAACGGTTCGCCATGCGCCGGTTTCTCTCACAAA
CGGGCAAGTGGGACAAGCTGGTGGGCTTGCCGTCCTCGCTCCCGCTCCACCGGCGTCGCA
TGAACACATCCACGCAGGAGGTGGTGGCCTTCGCCGGCCGGCTGTGGTGGGTCGACCTGA
GCTGGGGCGCCCTCTCCGCCGACCCTTTCAGCGATCGCCCGGAGCTCCGCTTCGTCGAGC
TGCCGAGAGGCAGCGTGACACAGCCCATGGAGAAGGAGCGCCGGGAGCTGCGCAGGTTCC
GCCGCGTCGGCGTCAGCGAGGGGAGGCTGCGCTACGCCGAGGTGTCCCAGGAGGAGCCAT
ACGTGCTCAGTTCGTTCGCCCTCGACGACGACGGCGGCGGGTGGACGCTGGAGCACCGCG
TGGCTCTTAGCCGGCTCTGGCCGCATGACCAAAACCTCTGCAAGAACACGCCGCAGATCG
CAGCCATTGACCCACTGAACGCTGGCTGCATGCACCTCGTAGTTGGCAGGCAGGTTGTCT
CCATAGACATGGACAATGGGGATTTGCTTGGGTGCACGCTGGGAGGTGGAAGTGATCCAT
CCGTGGATACACTTACACCATGTTTGCTCCCTCCGTGGCTTGCATCGTGCCGGATCCCCC
GTGCAGAAACTCTTTCAAGGAACAAGGCGGATGCGAAAAGCAAGAGTTTATCAGACATGT
TGGTTCGTGTAGATAGGAAGAAGATGACTTGAGACCAAACAGCAAATGGGTCAG