Gene sequences

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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os05t0243200-01
CDS Infomation	cds chromosome:IRGSP-1.0:5:8692457:8696463:-1 gene:Os05g0243200 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:orf160, ORF160 description:Similar to Ribosomal protein L13. (Os05t0243200-01);Similar to 50S ribosomal protein L13. (Os05t0243200-02)
Sequence	ATGCTGCCGGCGGCGCTGCTTCCACATCTTCTGATCCCACCGATGATGGGGAGGATAGCC TCGCCTCTGATCCCACCGAAGCCGGGGAGGATAACCTGGCCTCGCTCTGGGAGGACGCCG GGGACGCCGATGACATCTTCGCCGCCGATGCTATGGTCGACGAGGTGCTGGTCGAACGCG TCTGCGCTGTTGTGGAGTCCACCCCCGAGGATCAGATCCCCTTCGCCCTCGCTTTCAAGG TCGTGGACTTACAACGAGCCACTCCTCGCCGCCATTCTCGTGTCCACCGCCAAGAGCTGC TCCGCACTTGCAGACTTGAGAAGAATCAATTTAGATGGTTTGAGATGGTGTGTATTTGAC GCAAAGGGCCAGGTCCTTGGACGGTTGGCGTCCCAAATAGCTGTTGTGCTTCAGGGCAAG GACAAGCCAACTTATGCACCACATGTGGAAAACAGAGACATGTGCGTTGTGCTTAATGGA TAA

Peptide Sequence

PEP ID	Os05t0243200-01
PEP Infomation	pep chromosome:IRGSP-1.0:5:8692457:8696463:-1 gene:Os05g0243200 transcript:Os05t0243200-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:orf160, ORF160 description:Similar to Ribosomal protein L13. (Os05t0243200-01);Similar to 50S ribosomal protein L13. (Os05t0243200-02)
Sequence	MLPAALLPHLLIPPMMGRIASPLIPPKPGRITWPRSGRTPGTPMTSSPPMLWSTRCWSNA SALLWSPPPRIRSPSPSLSRSWTYNEPLLAAILVSTAKSCSALADLRRINLDGLRWCVFD AKGQVLGRLASQIAVVLQGKDKPTYAPHVENRDMCVVLNG

Transcript Sequence

Transcript ID	Os05t0243200-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:5:8692457:8696463:-1 gene:Os05g0243200 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:orf160, ORF160 description:Similar to Ribosomal protein L13. (Os05t0243200-01);Similar to 50S ribosomal protein L13. (Os05t0243200-02)
Sequence	CTCGACTCGACCAGTGACTCGTCCGCCTCCACACATTACAGCTACCACGCTGCCGCCGCC ACCGCTGTCGCCGACGAGGAGGAGATGTGGCGGGCGTTCGGGAGCTTGTGCTCTCCTCCT CCTCCAGTCTTCCATCCACAGGCCTCTCCCGCCACCGCCGCCATCTCCACTTCGAGCCTT AACTAGACTCTACCACCTCCGCGCCCCCTCTCCCGCTTCCTCTCCTCCTCCCCGGAGCCC CTGCCGGATGCTGCCGGCGGCGCTGCTTCCACATCTTCTGATCCCACCGATGATGGGGAG GATAGCCTCGCCTCTGATCCCACCGAAGCCGGGGAGGATAACCTGGCCTCGCTCTGGGAG GACGCCGGGGACGCCGATGACATCTTCGCCGCCGATGCTATGGTCGACGAGGTGCTGGTC GAACGCGTCTGCGCTGTTGTGGAGTCCACCCCCGAGGATCAGATCCCCTTCGCCCTCGCT TTCAAGGTCGTGGACTTACAACGAGCCACTCCTCGCCGCCATTCTCGTGTCCACCGCCAA GAGCTGCTCCGCACTTGCAGACTTGAGAAGAATCAATTTAGATGGTTTGAGATGGTGTGT ATTTGACGCAAAGGGCCAGGTCCTTGGACGGTTGGCGTCCCAAATAGCTGTTGTGCTTCA GGGCAAGGACAAGCCAACTTATGCACCACATGTGGAAAACAGAGACATGTGCGTTGTGCT TAATGGATAAGATAACTGAAATGTAACTGTAATTATTGTTGTACACATCTTTACTATGGT GCTTCTATGTCTTAATTCAGTTAAGTTTTCACACTAGAAGGGTTAGATATACACTTATGT TAGCAAACACTTGGATCTTTTCGTGAACTATAAGGATGGTTGTGACTTGCGAAGGGTCTT GCTTCGTATGTACCCTGTATGCTTTTAGGGTCTGGTTTCTGCAGTGCCTTTGCTGAACTA GTGATCTGCTTCTATATCTTACAATTCCTCTATGTGGTGGGGATTTTCATGAGAACTGTT TATATTGAATATCAAGTTCAACATACCATAAAATCCAACCATTTCTTCTTGGTTTC