Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os05t0242000-01
CDS Infomation	cds chromosome:IRGSP-1.0:5:8640728:8642246:1 gene:Os05g0242000 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein of unknown function DUF247, plant family protein. (Os05t0242000-01)
Sequence	ATGGATGTGGCGTCGTTGGAATCTTCGGTGGAGGCAACGTTGGATGCCCTCAGAGGAGAT CAATGGAGGGCGCGGCAGCCATTTACCATCTTCCGCGTTCCCGCCAACGTCCGCGAGAGC AATCGCACCTCGTACGAGCCGCGCGTGGTGTCCATCGGCCCCTATTACCACGGCGGCGCC GCACTGCGCACCATGGAGGACCACAAGTGGCACTACCTACAGGGCCTGCTGTCCCGCCAC GCCGGCGACGGCAGTGTCGCGGCGGTCAGCGCGTCCACTTTGGTCGCAGAGATGAGAACC CTGGAGGCCCAGGCGCGCGCCTGCTACAGCGAGCGCCCCGCCGGCCTCGCCTCCGACGAC TTCATCGTGATGCTCCTGCTCGATGGCTGCTTCATCCTCGAGTTCCTCTTAAAGTGGCAC GCCAAGGAGCCCGACGCGCTCTGCGACGCTGGAAGGGGCCTCACGCTTGTCCCCGCGGCC GCCGACCTGCTCCTCATGGAGAACCAGATCCCGTTCTTCGTCCTCGAGAGGCTCTATGGC GCAGTCACCGGCGGCGGCGCCCAGCACGGCAGGGAGTCCCTCCTTCACCTTTTCGTCAAG TACCTCGGCAGTGAGGACGAAGAGCCAATGAGATGGCCTTCCGGCGACTGGGAGGTCCAC CACCTCCTCCATCTGTACTACCAGAGCTTCATTCCCAACCGAACACCGCCGCGAAGCCGC CGAGGCCCACGGTCTGACCGACGGACGATCACCAGGACGCCACGGGTGATACCATGCGCA ACCGAGATGAGAGAGGCGGGGGTACAGTTCGTCGCCGCGCAGAGCCCAGCGGCCGCCGCA GGGGGGACGAGGTACGACGTGGCGTTCGACGCCCGCTGGGGCGTAATGGAGATACCCACA GTCCTGATCGACGACGCGAGGCGGCCGCTGCTCGCGAACCTGCTCGCGTTCGAGCAGAGC CAGCGCGGCGAGGAGGAGGGGCTCCTGAGCAGCTACGTGGCACTGATGAGCCAGCTCATC GTGACAGCACGCGACGTGGAGCTGCTCCGCCGGCGCGGCGTCGTGGTGAACCTGTTGGAC AACGACGAGGAGGCGGCCCGGTTCTTCAACCGCCTCGACGACTGCCACCCGGCGGGCTAC GACTCGCAGGCCTTCTCCGGACTGTACGACGACGTGACGCGCTACTGTGGGACATGGTGG CACAGCCACATGGCTGGGCTCCGGCGCAATTATTTTCCCAGCCCGTGGTCGGCCATCTCC GTTGCCGTCGCCACATTCGTCATCGCTCTAGCCGCTACACAGACATACTTCACGGTGTTC CCACCCAACAAGTGA

Peptide Sequence

PEP ID	Os05t0242000-01
PEP Infomation	pep chromosome:IRGSP-1.0:5:8640728:8642246:1 gene:Os05g0242000 transcript:Os05t0242000-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein of unknown function DUF247, plant family protein. (Os05t0242000-01)
Sequence	MDVASLESSVEATLDALRGDQWRARQPFTIFRVPANVRESNRTSYEPRVVSIGPYYHGGA ALRTMEDHKWHYLQGLLSRHAGDGSVAAVSASTLVAEMRTLEAQARACYSERPAGLASDD FIVMLLLDGCFILEFLLKWHAKEPDALCDAGRGLTLVPAAADLLLMENQIPFFVLERLYG AVTGGGAQHGRESLLHLFVKYLGSEDEEPMRWPSGDWEVHHLLHLYYQSFIPNRTPPRSR RGPRSDRRTITRTPRVIPCATEMREAGVQFVAAQSPAAAAGGTRYDVAFDARWGVMEIPT VLIDDARRPLLANLLAFEQSQRGEEEGLLSSYVALMSQLIVTARDVELLRRRGVVVNLLD NDEEAARFFNRLDDCHPAGYDSQAFSGLYDDVTRYCGTWWHSHMAGLRRNYFPSPWSAIS VAVATFVIALAATQTYFTVFPPNK

Transcript Sequence

Transcript ID	Os05t0242000-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:5:8640728:8642246:1 gene:Os05g0242000 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein of unknown function DUF247, plant family protein. (Os05t0242000-01)
Sequence	GCATGCGTGTCTTCTTCCTACCATCACTTCTCTCGTTTTGCTATCGATCTCATGGATGTG GCGTCGTTGGAATCTTCGGTGGAGGCAACGTTGGATGCCCTCAGAGGAGATCAATGGAGG GCGCGGCAGCCATTTACCATCTTCCGCGTTCCCGCCAACGTCCGCGAGAGCAATCGCACC TCGTACGAGCCGCGCGTGGTGTCCATCGGCCCCTATTACCACGGCGGCGCCGCACTGCGC ACCATGGAGGACCACAAGTGGCACTACCTACAGGGCCTGCTGTCCCGCCACGCCGGCGAC GGCAGTGTCGCGGCGGTCAGCGCGTCCACTTTGGTCGCAGAGATGAGAACCCTGGAGGCC CAGGCGCGCGCCTGCTACAGCGAGCGCCCCGCCGGCCTCGCCTCCGACGACTTCATCGTG ATGCTCCTGCTCGATGGCTGCTTCATCCTCGAGTTCCTCTTAAAGTGGCACGCCAAGGAG CCCGACGCGCTCTGCGACGCTGGAAGGGGCCTCACGCTTGTCCCCGCGGCCGCCGACCTG CTCCTCATGGAGAACCAGATCCCGTTCTTCGTCCTCGAGAGGCTCTATGGCGCAGTCACC GGCGGCGGCGCCCAGCACGGCAGGGAGTCCCTCCTTCACCTTTTCGTCAAGTACCTCGGC AGTGAGGACGAAGAGCCAATGAGATGGCCTTCCGGCGACTGGGAGGTCCACCACCTCCTC CATCTGTACTACCAGAGCTTCATTCCCAACCGAACACCGCCGCGAAGCCGCCGAGGCCCA CGGTCTGACCGACGGACGATCACCAGGACGCCACGGGTGATACCATGCGCAACCGAGATG AGAGAGGCGGGGGTACAGTTCGTCGCCGCGCAGAGCCCAGCGGCCGCCGCAGGGGGGACG AGGTACGACGTGGCGTTCGACGCCCGCTGGGGCGTAATGGAGATACCCACAGTCCTGATC GACGACGCGAGGCGGCCGCTGCTCGCGAACCTGCTCGCGTTCGAGCAGAGCCAGCGCGGC GAGGAGGAGGGGCTCCTGAGCAGCTACGTGGCACTGATGAGCCAGCTCATCGTGACAGCA CGCGACGTGGAGCTGCTCCGCCGGCGCGGCGTCGTGGTGAACCTGTTGGACAACGACGAG GAGGCGGCCCGGTTCTTCAACCGCCTCGACGACTGCCACCCGGCGGGCTACGACTCGCAG GCCTTCTCCGGACTGTACGACGACGTGACGCGCTACTGTGGGACATGGTGGCACAGCCAC ATGGCTGGGCTCCGGCGCAATTATTTTCCCAGCCCGTGGTCGGCCATCTCCGTTGCCGTC GCCACATTCGTCATCGCTCTAGCCGCTACACAGACATACTTCACGGTGTTCCCACCCAAC AAGTGATCTCTCGTGGATTAGATATCAATTTTGCTATATATTTATCGACAGATGTAATTA CAGTACAATTATAGTGTGATTACACTGTAACTTACATGTAATTACACTGTAACTATAATA TAACTTGTATGTAACTTTC