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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os05t0241400-01
CDS Infomation

cds chromosome:IRGSP-1.0:5:8616503:8618486:-1 gene:Os05g0241400 gene_biotype:protein_coding transcript_biotype:protein_coding description:Profilin/allergen domain containing protein. (Os05t0241400-01)
Sequence

ATGGCCGCGGACTGGATGTGGGCGCGCCGGTCGTGGGAGAAGTGGGCTGGGAAGCACGTC
GGCGCTTCGGGGAAGCCGGTCAAGGCGGCGCTGCTGCTCAACTACGACCCGACGGGGCCG
TCTCGCCTCCTCCCCGTCGTAGCAGAGCAAGAAGGAACTGAACTGAAAGCTGTTGATCTG
CTACCATTTCTAGACTTTGTTCGACGGAACAATCTGCAGATGGAATTCTTCTCTATTGGC
TCAAACCGGTATTTGGTCACCTCAATCCATGAACACTGGTTCTGTGCTCGTTGCGTTAAT
GCAGTACAGCCAGAAGGTGAAGGTGTTATAGTTATGGAGATTGGAGCTTACTTGTTAGTT
TGTATGATGGTTCTCTTGGTTCTGCTTCACAAGCAATGGTGGCTGTTGATCAGTTTGCAT
GGCACTTTAATCGAAGAACTCACTAACTGCTGA

Peptide Sequence

PEP ID

Os05t0241400-01
PEP Infomation

pep chromosome:IRGSP-1.0:5:8616503:8618486:-1 gene:Os05g0241400 transcript:Os05t0241400-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Profilin/allergen domain containing protein. (Os05t0241400-01)
Sequence

MAADWMWARRSWEKWAGKHVGASGKPVKAALLLNYDPTGPSRLLPVVAEQEGTELKAVDL
LPFLDFVRRNNLQMEFFSIGSNRYLVTSIHEHWFCARCVNAVQPEGEGVIVMEIGAYLLV
CMMVLLVLLHKQWWLLISLHGTLIEELTNC

Transcript Sequence

Transcript ID

Os05t0241400-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:5:8616503:8618486:-1 gene:Os05g0241400 gene_biotype:protein_coding transcript_biotype:protein_coding description:Profilin/allergen domain containing protein. (Os05t0241400-01)
Sequence

ACGCCGCCGCCGCCGCATCTCGCTCCCCTACCCCCCACCGCCGCAAGCCTCCCCGGCGGC
GAACCTTACCGCCCCCGCAATGGCCGCGGACTGGATGTGGGCGCGCCGGTCGTGGGAGAA
GTGGGCTGGGAAGCACGTCGGCGCTTCGGGGAAGCCGGTCAAGGCGGCGCTGCTGCTCAA
CTACGACCCGACGGGGCCGTCTCGCCTCCTCCCCGTCGTAGCAGAGCAAGAAGGAACTGA
ACTGAAAGCTGTTGATCTGCTACCATTTCTAGACTTTGTTCGACGGAACAATCTGCAGAT
GGAATTCTTCTCTATTGGCTCAAACCGGTATTTGGTCACCTCAATCCATGAACACTGGTT
CTGTGCTCGTTGCGTTAATGCAGTACAGCCAGAAGGTGAAGGTGTTATAGTTATGGAGAT
TGGAGCTTACTTGTTAGTTTGTATGATGGTTCTCTTGGTTCTGCTTCACAAGCAATGGTG
GCTGTTGATCAGTTTGCATGGCACTTTAATCGAAGAACTCACTAACTGCTGATTTTTGTT
AGTTTCAGGTGTGAGATCTGAGATGAGTCTAGACATTGTTGATTGAAATCATTCTTCTAA
ACTTTAGTGTAACTGCCTAATATTACTGTTCTCTTGGGTTTAGTTGTAATCGCTATTAGC
TGTTTTCTGTAAGACAGATGTGTTTGAGGCAATTTAACTAAACTTATTAGGGCATATCTA
CTCGGTAGTCGTAAGTCCACAT