Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os05t0241000-01
CDS Infomation

cds chromosome:IRGSP-1.0:5:8584562:8589468:-1 gene:Os05g0241000 gene_biotype:protein_coding transcript_biotype:protein_coding description:Prefoldin domain containing protein. (Os05t0241000-01)
Sequence

ATGGATGTTGAGAACAGTATGGATGATGACCATTTCCAACAAAACATGGGTAATGGAGAT
GGAATGAATGTAGAAGGAGGAAGTATGGAAATTATTACTAGAGTGGAACTTGAGCTTGCA
TTTGCCTCTGAGAAATTACTAAATCTAGAGATGTTGGTGATGGAGATAGCTCGCAAGGCT
ACTGATTTTGAGCCTCCTACATTGGAAGACGAATCTGTTTCTTCTGAAACTGCCGAGAGT
GCTTTTGAATTGGACATCCTATATGGTTTTCTAGATGCAGAAGTAGGGGAGTTAGATGAC
ATGATCAGTACTCTTGAGACTGATATTCAAAATGTTGAGCATATGGTTTGTCAAGATGAA
TCTGGAGGCAAGATTAAAGCTAGGCTAGATGCTGCTATGGTGTCTTTAAAGCAGATGAAG
GAATTAGTTTCTGATATCAGAAAAGAGTCAGCCAAGTTTGAGAAAGCCATAGAGTTTCCC
CATGACAAAGAAGGCATTACTGGAGACGCTGGGTATGAAAATGGTATTGTGTCATCCCAC
ACTAGCATGAGGACAGAGGATCAACGAAGAAATGTTTTGCAGATGTTAGAACAATCGATA
GCAAGTGAGCTGGATCTTGAAAAGAAGCTCTCTGAATCAAGATGTATTATAGAAGAACTC
AAACTAAAGCTCCATCATCATGATCAGGAAAAATATTTCCTGGAGGAATCTATCGAATCA
TTATGTGGGAAAACATTTGCAGCAGAAAACGCTTCTGAGGTACTCTTGGGAACTTCAAAG
GAACTTGTGGACAAAGTTAGTACCGTAGAGTGCCATCTAAGTGCATCAAGATGTAGGGAG
GGTGATCTGGAGTCGAAGTTAGGAGAAAGCTTGATGGGATTATCTTCACTGCAAGTCAAC
GCAGAGAATATTCAAGAAGGGAGTCAACATAGTGGAGGCACAGAAACTCATCCAAGTCCT
GAATTGCCATCCTTGCAGGATAAGGTTAAGGAGCTAGAAAAACAGTTGAGGGAATCTGAT
TCACAGTTGCAGTTGGCAAAGGCATCAGCAGAAACTTTTCAGGAGGAGCAGAATGTGCTG
CATGCCGAGATAAGCACATTAGAAAACATTATTAAGAGTCTCAAAGAAGATGTCTCAAGA
GCAGAAAGTAGAGCACAAAATGCTGAGTTAAGGTGCATGCAGCTAACTGAAGCTAACATA
GAACTTAATGGGGAGCTAAACTCTCTTAAAAGTCATGGTTCAGAAAAGACTAGCCTTTTG
GAGAGGAAACTTAAGGAGTCACATACCCAATTAGAGCATGCAAAGGCATCTCTTGATGCC
ACTGTTGAACAGCAGAGTATGCTGAGATCTACAATGTCGGACATGGAACATATGATTGAT
GATCTGAAGGGAAAGGTTTTAAAAGCTGAAACCAGAGCAGAGAATGCTGAATCTAAGTGT
ACATTGTTAACAGACACTAACTTAGAACTTAGTGAGGAGCTATCGTTTCTGAGGGGTCGA
GCAGAAAGTCTAGAGAACTCATTACATGAAGCCAACCATGTTAAGATGTCTACCGTCAAG
GATATTGGAATCAGAACAAAAATAATTACTGATTTGGTCACAAAACTTGCATTGGAAAGA
GAACGACTTCATCAACAGATTTCGTTGTTGACAAAGAAAAACAAGATATTGGCTCAGAAG
TGCAAAGGAAGTGTTAAGGATGACACTCAATTGAGCAAAAATGTTACTGGCAAAGATGTT
GAGCTTCATTCTACTAAATTAGCGGAGGAAATAGTTCCTGATTTTTCTTCATCACAGACT
AAGGCTGAGAAACCTGTAGACCCTAGCAATGAGGAAGAGAAGACGAGGTCTTCAGAGGAT
GATGACTCTGGCGGGGAGGGCACTGCTGAGGCAGTCCGGACCATACAGCCGTCAGTGCTG
AACTGGAAGTACATCACCGTGGCATTCCTGATCTTGTTAGTCGCTGTCTTCATATACTTG
CCACTCCCAGAAGAAAGCAGCTCCGTTTGA

Peptide Sequence

PEP ID

Os05t0241000-01
PEP Infomation

pep chromosome:IRGSP-1.0:5:8584562:8589468:-1 gene:Os05g0241000 transcript:Os05t0241000-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Prefoldin domain containing protein. (Os05t0241000-01)
Sequence

MDVENSMDDDHFQQNMGNGDGMNVEGGSMEIITRVELELAFASEKLLNLEMLVMEIARKA
TDFEPPTLEDESVSSETAESAFELDILYGFLDAEVGELDDMISTLETDIQNVEHMVCQDE
SGGKIKARLDAAMVSLKQMKELVSDIRKESAKFEKAIEFPHDKEGITGDAGYENGIVSSH
TSMRTEDQRRNVLQMLEQSIASELDLEKKLSESRCIIEELKLKLHHHDQEKYFLEESIES
LCGKTFAAENASEVLLGTSKELVDKVSTVECHLSASRCREGDLESKLGESLMGLSSLQVN
AENIQEGSQHSGGTETHPSPELPSLQDKVKELEKQLRESDSQLQLAKASAETFQEEQNVL
HAEISTLENIIKSLKEDVSRAESRAQNAELRCMQLTEANIELNGELNSLKSHGSEKTSLL
ERKLKESHTQLEHAKASLDATVEQQSMLRSTMSDMEHMIDDLKGKVLKAETRAENAESKC
TLLTDTNLELSEELSFLRGRAESLENSLHEANHVKMSTVKDIGIRTKIITDLVTKLALER
ERLHQQISLLTKKNKILAQKCKGSVKDDTQLSKNVTGKDVELHSTKLAEEIVPDFSSSQT
KAEKPVDPSNEEEKTRSSEDDDSGGEGTAEAVRTIQPSVLNWKYITVAFLILLVAVFIYL
PLPEESSSV

Transcript Sequence

Transcript ID

Os05t0241000-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:5:8584562:8589468:-1 gene:Os05g0241000 gene_biotype:protein_coding transcript_biotype:protein_coding description:Prefoldin domain containing protein. (Os05t0241000-01)
Sequence

AAAGAGGAGGCGAGGCAGAGGAGTGGAGCAGCATCCGAATCCGGCCACCTCATCATCTCG
CCTCGCTTCCCGGCGGAGATCGCGAGGGCGACGGCGGCGGCGGCGGCAAGCTGCCTCCGA
CGAGCCCAGGCAGAAAAGGAGTTATGGATGTTGAGAACAGTATGGATGATGACCATTTCC
AACAAAACATGGGTAATGGAGATGGAATGAATGTAGAAGGAGGAAGTATGGAAATTATTA
CTAGAGTGGAACTTGAGCTTGCATTTGCCTCTGAGAAATTACTAAATCTAGAGATGTTGG
TGATGGAGATAGCTCGCAAGGCTACTGATTTTGAGCCTCCTACATTGGAAGACGAATCTG
TTTCTTCTGAAACTGCCGAGAGTGCTTTTGAATTGGACATCCTATATGGTTTTCTAGATG
CAGAAGTAGGGGAGTTAGATGACATGATCAGTACTCTTGAGACTGATATTCAAAATGTTG
AGCATATGGTTTGTCAAGATGAATCTGGAGGCAAGATTAAAGCTAGGCTAGATGCTGCTA
TGGTGTCTTTAAAGCAGATGAAGGAATTAGTTTCTGATATCAGAAAAGAGTCAGCCAAGT
TTGAGAAAGCCATAGAGTTTCCCCATGACAAAGAAGGCATTACTGGAGACGCTGGGTATG
AAAATGGTATTGTGTCATCCCACACTAGCATGAGGACAGAGGATCAACGAAGAAATGTTT
TGCAGATGTTAGAACAATCGATAGCAAGTGAGCTGGATCTTGAAAAGAAGCTCTCTGAAT
CAAGATGTATTATAGAAGAACTCAAACTAAAGCTCCATCATCATGATCAGGAAAAATATT
TCCTGGAGGAATCTATCGAATCATTATGTGGGAAAACATTTGCAGCAGAAAACGCTTCTG
AGGTACTCTTGGGAACTTCAAAGGAACTTGTGGACAAAGTTAGTACCGTAGAGTGCCATC
TAAGTGCATCAAGATGTAGGGAGGGTGATCTGGAGTCGAAGTTAGGAGAAAGCTTGATGG
GATTATCTTCACTGCAAGTCAACGCAGAGAATATTCAAGAAGGGAGTCAACATAGTGGAG
GCACAGAAACTCATCCAAGTCCTGAATTGCCATCCTTGCAGGATAAGGTTAAGGAGCTAG
AAAAACAGTTGAGGGAATCTGATTCACAGTTGCAGTTGGCAAAGGCATCAGCAGAAACTT
TTCAGGAGGAGCAGAATGTGCTGCATGCCGAGATAAGCACATTAGAAAACATTATTAAGA
GTCTCAAAGAAGATGTCTCAAGAGCAGAAAGTAGAGCACAAAATGCTGAGTTAAGGTGCA
TGCAGCTAACTGAAGCTAACATAGAACTTAATGGGGAGCTAAACTCTCTTAAAAGTCATG
GTTCAGAAAAGACTAGCCTTTTGGAGAGGAAACTTAAGGAGTCACATACCCAATTAGAGC
ATGCAAAGGCATCTCTTGATGCCACTGTTGAACAGCAGAGTATGCTGAGATCTACAATGT
CGGACATGGAACATATGATTGATGATCTGAAGGGAAAGGTTTTAAAAGCTGAAACCAGAG
CAGAGAATGCTGAATCTAAGTGTACATTGTTAACAGACACTAACTTAGAACTTAGTGAGG
AGCTATCGTTTCTGAGGGGTCGAGCAGAAAGTCTAGAGAACTCATTACATGAAGCCAACC
ATGTTAAGATGTCTACCGTCAAGGATATTGGAATCAGAACAAAAATAATTACTGATTTGG
TCACAAAACTTGCATTGGAAAGAGAACGACTTCATCAACAGATTTCGTTGTTGACAAAGA
AAAACAAGATATTGGCTCAGAAGTGCAAAGGAAGTGTTAAGGATGACACTCAATTGAGCA
AAAATGTTACTGGCAAAGATGTTGAGCTTCATTCTACTAAATTAGCGGAGGAAATAGTTC
CTGATTTTTCTTCATCACAGACTAAGGCTGAGAAACCTGTAGACCCTAGCAATGAGGAAG
AGAAGACGAGGTCTTCAGAGGATGATGACTCTGGCGGGGAGGGCACTGCTGAGGCAGTCC
GGACCATACAGCCGTCAGTGCTGAACTGGAAGTACATCACCGTGGCATTCCTGATCTTGT
TAGTCGCTGTCTTCATATACTTGCCACTCCCAGAAGAAAGCAGCTCCGTTTGAAGAGGCC
AATGCAATGATGGCTAATGTAGTCTGTAGTGTGTACACTATTTACATCCCTGTTTTTTTT
TTCTTTGTTTGTTTCACCCCCTTTCTGCTCATAGAATAAGCAATTTTTGGTGCTGTAGAC
TGTGATATGTAGTGTTCAGATCTGGCCTGAACTCGGTAGTGATGCACTGATGCTCCTGGA
TGAGTGATTGTAAACTCTTAGTTTGGCTGCCATTGCCCAGTCTTTTGGCCTCTAAGACAA
ATGGTTATGACTTGTGAGTTGTGACTAGTAAATTTCCTTCTGTTGATTCTAATT