Gene sequences

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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os05t0238200-01
CDS Infomation	cds chromosome:IRGSP-1.0:5:8440438:8445684:1 gene:Os05g0238200 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:SKIP interacting protein 33, SKIPa-interacting protein 33, SKIPa-interacting protein 33 description:Similar to Ubiquitin ligase SINAT5 (EC 6.3.2.-) (Seven in absentia homolog 5). (Os05t0238200-01)
Sequence	ATGGACATGGACAGCGTGGAGTGCCTCTCCCTCCCGGACTCGTCCATGGACGTGGACGAC GTCGACGGCGGCGGCTCGGTGCACCACCACCACCACCACCACCACGCCCTCCCGCCTCAC CTCCCCGCGGGGGTCGCCGTCGGGGTCGGCCCCGGGGGGCGCGCGTTCCCCAAGGCGAAT GTCGCTGGGGTTGGTGGTGGCGGCGCCGCCGGGGCCCCCGCGGCGGGGGGAGCGGTGGCC GGAGGTGGGGGCCCCGGCGGCGGGCCTCCCGCCACCAGCGTGCACGAGCTGCTCGAGTGC CCCGTCTGCACCAACTCCATGTTCCCGCCCATCCACCAGTGCCAAAATGGACACACTTTA TGTTCAACATGCAAGGCTAGAGTCCACAACCGGTGCCCTACCTGCAGACAAGAGCTCGGT GATATTAGGTGCTTGGCACTGGAGAAAGTAGCAGAGTCACTCGAGCTTCCTTGCAAGTAT TGTTCTTTAGGTTGCCCAGAAATTTTTCCATACTACAGCAAGATAAAGCATGAAGCACAG TGCAGCTTTAGGCCATATAACTGCCCTTATGCTGGTTCTGAATGTGCTGTGGCTGGTGAT ATTCCTTTCCTTGTTGCACATTTGAGGGACGACCACAAAGTTGATATGCACAGTGGCTGC ACATTCAACCACAGATATGTCAAATCTAATCCACGCGAGGTTGAGAATGCGACCTGGATG CTAACAGTGTTCCATTGTTTCGGGCAGTATTTCTGCCTGCATTTCGAGGCGTTCCAGCTT GGAATGGCACCAGTTTATATGGCCTTCCTCCGTTTCATGGGGGATGAGAATGAAGCGAGG AACTACACCTACAGCCTAGAGGTTGGTGGTAATGGCAGGAAGATGGTGTGGGAAGGCACC CCTAGGAGCATCCGCGACAGCCACCGGAAGGTGCGGGACAGCCATGACGGCCTCATCATC CAGAGGAACATGGCACTCTTCTTCTCCGGCGGTGACAGGAAGGAGCTGAAGCTGAGGGTG ACCGGCCGTATCTGGAAAGAACAGACGAACCCGGATGGGGCCTGCATACCGAACCTTTGT AGCTGA

Peptide Sequence

PEP ID	Os05t0238200-01
PEP Infomation	pep chromosome:IRGSP-1.0:5:8440438:8445684:1 gene:Os05g0238200 transcript:Os05t0238200-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:SKIP interacting protein 33, SKIPa-interacting protein 33, SKIPa-interacting protein 33 description:Similar to Ubiquitin ligase SINAT5 (EC 6.3.2.-) (Seven in absentia homolog 5). (Os05t0238200-01)
Sequence	MDMDSVECLSLPDSSMDVDDVDGGGSVHHHHHHHHALPPHLPAGVAVGVGPGGRAFPKAN VAGVGGGGAAGAPAAGGAVAGGGGPGGGPPATSVHELLECPVCTNSMFPPIHQCQNGHTL CSTCKARVHNRCPTCRQELGDIRCLALEKVAESLELPCKYCSLGCPEIFPYYSKIKHEAQ CSFRPYNCPYAGSECAVAGDIPFLVAHLRDDHKVDMHSGCTFNHRYVKSNPREVENATWM LTVFHCFGQYFCLHFEAFQLGMAPVYMAFLRFMGDENEARNYTYSLEVGGNGRKMVWEGT PRSIRDSHRKVRDSHDGLIIQRNMALFFSGGDRKELKLRVTGRIWKEQTNPDGACIPNLC S

Transcript Sequence

Transcript ID	Os05t0238200-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:5:8440438:8445684:1 gene:Os05g0238200 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:SKIP interacting protein 33, SKIPa-interacting protein 33, SKIPa-interacting protein 33 description:Similar to Ubiquitin ligase SINAT5 (EC 6.3.2.-) (Seven in absentia homolog 5). (Os05t0238200-01)
Sequence	GAGGACGACACCCCGTCCCCCCCGTGTCCAGCCACCACCACCGCGTCGTCGTCGTCGACC CAGCCATCCATCCCACCCACACGTCACCACCCGCGCATCCTCCCCCCGTGCTGCGGCGGC GGCGGCGGCCGGCGGCCATGGACATGGACAGCGTGGAGTGCCTCTCCCTCCCGGACTCGT CCATGGACGTGGACGACGTCGACGGCGGCGGCTCGGTGCACCACCACCACCACCACCACC ACGCCCTCCCGCCTCACCTCCCCGCGGGGGTCGCCGTCGGGGTCGGCCCCGGGGGGCGCG CGTTCCCCAAGGCGAATGTCGCTGGGGTTGGTGGTGGCGGCGCCGCCGGGGCCCCCGCGG CGGGGGGAGCGGTGGCCGGAGGTGGGGGCCCCGGCGGCGGGCCTCCCGCCACCAGCGTGC ACGAGCTGCTCGAGTGCCCCGTCTGCACCAACTCCATGTTCCCGCCCATCCACCAGTGCC AAAATGGACACACTTTATGTTCAACATGCAAGGCTAGAGTCCACAACCGGTGCCCTACCT GCAGACAAGAGCTCGGTGATATTAGGTGCTTGGCACTGGAGAAAGTAGCAGAGTCACTCG AGCTTCCTTGCAAGTATTGTTCTTTAGGTTGCCCAGAAATTTTTCCATACTACAGCAAGA TAAAGCATGAAGCACAGTGCAGCTTTAGGCCATATAACTGCCCTTATGCTGGTTCTGAAT GTGCTGTGGCTGGTGATATTCCTTTCCTTGTTGCACATTTGAGGGACGACCACAAAGTTG ATATGCACAGTGGCTGCACATTCAACCACAGATATGTCAAATCTAATCCACGCGAGGTTG AGAATGCGACCTGGATGCTAACAGTGTTCCATTGTTTCGGGCAGTATTTCTGCCTGCATT TCGAGGCGTTCCAGCTTGGAATGGCACCAGTTTATATGGCCTTCCTCCGTTTCATGGGGG ATGAGAATGAAGCGAGGAACTACACCTACAGCCTAGAGGTTGGTGGTAATGGCAGGAAGA TGGTGTGGGAAGGCACCCCTAGGAGCATCCGCGACAGCCACCGGAAGGTGCGGGACAGCC ATGACGGCCTCATCATCCAGAGGAACATGGCACTCTTCTTCTCCGGCGGTGACAGGAAGG AGCTGAAGCTGAGGGTGACCGGCCGTATCTGGAAAGAACAGACGAACCCGGATGGGGCCT GCATACCGAACCTTTGTAGCTGATGAGCAAAGCGTACGACAGATGAAACGATTTGTTGCT ATTTGGCTGGCTTGTTATTTTTATCCATTGCCATGTCCTGTTTTCGATAGTCCAGTGATC GTGCCAGTGCTGTTGTATGTTAAGAAGCAAATTTTAGAGGTGTAAAACATTACTGTAAAG TAATATTGTGTATATCGAATTCAAGAAAATCCCACAAGTTGGCC