Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os05t0237400-01
CDS Infomation	cds chromosome:IRGSP-1.0:5:8378906:8382300:1 gene:Os05g0237400 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Viroid symptom modulation protein. (Os05t0237400-01)
Sequence	ATGGAGGACGGCATGGATTTCAGCCCTCATAAAAATAGCACAGAACAGAATCGAACCAGC TTTGAAGAAGATGATCAATTCAGCATTCGATCAGCACCCTCCAAACCATCTCCAGACAAG AAATCGAAGCCCAAGAACAAGCCGAATCATCACTCCGACAAGACGGCGAACCCGCCGCCG CAGAGGCCCGAGACGACGGCGGCGCTGGTGACGACGACCGCAGCAGCAGCAACAGCAGGA ACAAACCGTGGCGAGGCCGTCAGCAACGGCAGCCTGGACAGCATCAGCAGCGGCAGCACA CGGAGCAACAGCCTGGAGAGCAGCAGCACCGGCGCCGCGGCGGCGCCAACGGTGCTGACG ACATCGGCGTCGACGGCGTCGGTGTCGGCGTCGGGGCAGAACGTGAAGCGGCACACCGGC GGGGACAGCCGGTGGGAGGCGGTCCAGGCGGCGACGGCGCGCGACGCGCCGGCGCCGCTG AGCCTGGCGCACTTCCGGCTGCTGAAGCGGCTGGGGTACGGCGACATCGGGAGCGTGTAC CTGGTGGAGCTCCGCGGCACGTCGGCCTTCTTCGCCATGAAGGTGATGGACAAGGCGTCG ATCGCGAGCCGGAACAAGATGGCGCGCGCGGAGACGGAGCGCGAGATCCTGGGCCTCCTC GACCACCCCTTCCTCCCCACGCTCTACACCCACTTCGAGACCGACAAGTTCTACTGCCTC GTCATGGAGTACTGCTCCGGCGGCAACCTCCATTCCCTCCGGCAGAAGCAGCCCTCCAAG CACTTCTCCGAGCCCGCCGCCAGGTTTTACGTGGCAGAGGTGCTACTGGCGCTGGAGTAC CTGCACATGCTGGGGATCGTGTACAGGGACCTCAAGCCGGAGAACGTCCTGGTGAGGGAC GACGGCCACATCATGCTCTCCGACTTCGACCTCTCCCTCCGCTGCACCGTCTGCCCCACC CTCGTCAAGTCCTCCTCCGTCCACGCCACCGGCAGCGGCGGCGGCATAGGCAGCAGAGGA GACGCCATCGACGGCGGCGAGAGCATGCCGGCGAACCAGGGCTGCATCCAGCCCTCCTCC TTCTTCCCGCGCATCCTGCCGCGGCGCAGCCGCAAGGCGTCCAAGAGCGACATGGGCCTG CTGCTCAACGGCGCGGCGGCGGTGGAGTTCAACGCGGAGCCGACGGAGGCGCGGTCCATG TCGTTCGTGGGCACGCACGAGTACCTGGCCCCGGAGATCATCCGCGGCGAGGGCCACGGC AGCGCCGTCGACTGGTGGACGCTGGGAATCTTCCTCTACGAGCTCATCCACGGCGCCACC CCGTTCAAGGGCGCCGGCAACCGCGCCACGCTCTGCAACGTCATCGAGCAGCCGCTCCGC TTCCCCTCCGACGGCGGCGCCAGCGCCGTCGCGCGTGACCTCATCCGCGGCCTGCTCGTC AAGGAGCCCCACAAGCGGATCGCCTTCACCAGGGGCGCCACCGAGATCAAGCAGCACCCC TTCTTCGACGGCGTCAACTGGGCGCTCGTCAGGAGCCTCACGCCGCCGTCGGTGCCGGAG CCGGTCGACTTCCGGCAGTACGCCGCCGCCGCGTCCGCCACCACTCCCAAGGACAAGAAG CCGCCGGAGAACGCCGCCGCCGCCGCCGCCCCCGCCGCGGCGGATGGTGGCGGCGCGGCC AACTCGAGCACCGGCGAGTCCTACACTGACTTTGAGTATTTTTAA

Peptide Sequence

PEP ID	Os05t0237400-01
PEP Infomation	pep chromosome:IRGSP-1.0:5:8378906:8382300:1 gene:Os05g0237400 transcript:Os05t0237400-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Viroid symptom modulation protein. (Os05t0237400-01)
Sequence	MEDGMDFSPHKNSTEQNRTSFEEDDQFSIRSAPSKPSPDKKSKPKNKPNHHSDKTANPPP QRPETTAALVTTTAAAATAGTNRGEAVSNGSLDSISSGSTRSNSLESSSTGAAAAPTVLT TSASTASVSASGQNVKRHTGGDSRWEAVQAATARDAPAPLSLAHFRLLKRLGYGDIGSVY LVELRGTSAFFAMKVMDKASIASRNKMARAETEREILGLLDHPFLPTLYTHFETDKFYCL VMEYCSGGNLHSLRQKQPSKHFSEPAARFYVAEVLLALEYLHMLGIVYRDLKPENVLVRD DGHIMLSDFDLSLRCTVCPTLVKSSSVHATGSGGGIGSRGDAIDGGESMPANQGCIQPSS FFPRILPRRSRKASKSDMGLLLNGAAAVEFNAEPTEARSMSFVGTHEYLAPEIIRGEGHG SAVDWWTLGIFLYELIHGATPFKGAGNRATLCNVIEQPLRFPSDGGASAVARDLIRGLLV KEPHKRIAFTRGATEIKQHPFFDGVNWALVRSLTPPSVPEPVDFRQYAAAASATTPKDKK PPENAAAAAAPAAADGGGAANSSTGESYTDFEYF

Transcript Sequence

Transcript ID	Os05t0237400-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:5:8378906:8382300:1 gene:Os05g0237400 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Viroid symptom modulation protein. (Os05t0237400-01)
Sequence	CCCTGTTTTGCTGCCAATTGCAGCTTTCAAGCATGGCAAGACGAATAAGAGACCCTTTTC CTTAATTTTGTTTGATCATTCCCTTTCAGCTTTGATTTTCCTGGTATGACATGAAGCATT GTTCAGATTATTTGTTGTCTGAAGCCCTTATCAAGATTTGATTCCAGATTACCTAGAAAC TCAAGCTTTCAATAAACTAACAACGATGGAGGACGGCATGGATTTCAGCCCTCATAAAAA TAGCACAGAACAGAATCGAACCAGCTTTGAAGAAGATGATCAATTCAGCATTCGATCAGC ACCCTCCAAACCATCTCCAGACAAGAAATCGAAGCCCAAGAACAAGCCGAATCATCACTC CGACAAGACGGCGAACCCGCCGCCGCAGAGGCCCGAGACGACGGCGGCGCTGGTGACGAC GACCGCAGCAGCAGCAACAGCAGGAACAAACCGTGGCGAGGCCGTCAGCAACGGCAGCCT GGACAGCATCAGCAGCGGCAGCACACGGAGCAACAGCCTGGAGAGCAGCAGCACCGGCGC CGCGGCGGCGCCAACGGTGCTGACGACATCGGCGTCGACGGCGTCGGTGTCGGCGTCGGG GCAGAACGTGAAGCGGCACACCGGCGGGGACAGCCGGTGGGAGGCGGTCCAGGCGGCGAC GGCGCGCGACGCGCCGGCGCCGCTGAGCCTGGCGCACTTCCGGCTGCTGAAGCGGCTGGG GTACGGCGACATCGGGAGCGTGTACCTGGTGGAGCTCCGCGGCACGTCGGCCTTCTTCGC CATGAAGGTGATGGACAAGGCGTCGATCGCGAGCCGGAACAAGATGGCGCGCGCGGAGAC GGAGCGCGAGATCCTGGGCCTCCTCGACCACCCCTTCCTCCCCACGCTCTACACCCACTT CGAGACCGACAAGTTCTACTGCCTCGTCATGGAGTACTGCTCCGGCGGCAACCTCCATTC CCTCCGGCAGAAGCAGCCCTCCAAGCACTTCTCCGAGCCCGCCGCCAGGTTTTACGTGGC AGAGGTGCTACTGGCGCTGGAGTACCTGCACATGCTGGGGATCGTGTACAGGGACCTCAA GCCGGAGAACGTCCTGGTGAGGGACGACGGCCACATCATGCTCTCCGACTTCGACCTCTC CCTCCGCTGCACCGTCTGCCCCACCCTCGTCAAGTCCTCCTCCGTCCACGCCACCGGCAG CGGCGGCGGCATAGGCAGCAGAGGAGACGCCATCGACGGCGGCGAGAGCATGCCGGCGAA CCAGGGCTGCATCCAGCCCTCCTCCTTCTTCCCGCGCATCCTGCCGCGGCGCAGCCGCAA GGCGTCCAAGAGCGACATGGGCCTGCTGCTCAACGGCGCGGCGGCGGTGGAGTTCAACGC GGAGCCGACGGAGGCGCGGTCCATGTCGTTCGTGGGCACGCACGAGTACCTGGCCCCGGA GATCATCCGCGGCGAGGGCCACGGCAGCGCCGTCGACTGGTGGACGCTGGGAATCTTCCT CTACGAGCTCATCCACGGCGCCACCCCGTTCAAGGGCGCCGGCAACCGCGCCACGCTCTG CAACGTCATCGAGCAGCCGCTCCGCTTCCCCTCCGACGGCGGCGCCAGCGCCGTCGCGCG TGACCTCATCCGCGGCCTGCTCGTCAAGGAGCCCCACAAGCGGATCGCCTTCACCAGGGG CGCCACCGAGATCAAGCAGCACCCCTTCTTCGACGGCGTCAACTGGGCGCTCGTCAGGAG CCTCACGCCGCCGTCGGTGCCGGAGCCGGTCGACTTCCGGCAGTACGCCGCCGCCGCGTC CGCCACCACTCCCAAGGACAAGAAGCCGCCGGAGAACGCCGCCGCCGCCGCCGCCCCCGC CGCGGCGGATGGTGGCGGCGCGGCCAACTCGAGCACCGGCGAGTCCTACACTGACTTTGA GTATTTTTAATTAGTACTATATATTTATTCCTGACAATATTGTTGTGCACACCAGATTGT TTTGATCGATGGTTGTGAAGTATGAGAACTCGATTCGTGAT