Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os05t0235800-01
CDS Infomation	cds chromosome:IRGSP-1.0:5:8312907:8319399:1 gene:Os05g0235800 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:MINI-CHROMOSOME MAINTENANCE PROTEIN 6 description:DNA-dependent ATPase MCM domain containing protein. (Os05t0235800-01)
Sequence	ATGGAGGCGTTCGGCGGGTTCTTCGTGGACGAGAAGGCGGCGCGGGTGGAGAACATCTTC CTCGAGTTCCTCAGGCGGTTCAAGGAGGCGGATGCGGCGGAGGCGTTCTACGAGACGGAG CTGGAGGCGATGCGGTCGCGGGAGTCCACCACCATGTACGTCGACTTCGCCCACGTCATG CGATTCAACGACGTCCTCCAGAAGGCCATCTCCGAGGAGTATCTCAGGTTCGAGCCGTAC CTCCGGAATGCGTGCAAGAGGTTTGTGATGGAGCAGAGGACTGGCGAGAACCGTGCACCA ATCATCTCTGATGATAGCCCTAACAAGGACATTAACATTGCCTTCTACAACATACCAATG CTGAAGAGGTTGAGGGAGCTTGGAACAGCAGAGATTGGTAAGCTCACGGCTGTAATGGGG GTGGTTACACGGACAAGTGAGGTCCGGCCTGAGTTACTGCAAGGCACCTTCAAGTGCCTT GACTGTGGAAATGTTGTAAAGAATGTTGAGCAGCAGTTCAAGTATACTGAGCCAATAATA TGTGTCAATGCAACATGCCAAAATCGATCAAAATGGGCCCTTCTCCGACAAGAGAGCAAG TTCACAGATTGGCAGCGGGTCAGGATGCAGGAGACATCAAAAGAAATACCTGCTGGTTCA CTACCACGCTCCCTGGATGTCATTCTGAGGCATGAGATTGTTGAGAAGGCTAGAGCTGGA GACACGGTCATATTTACTGGAACTGTTGTTGCTGTTCCTGATGTTATGGCTCTAACTTCA CCTGGTGAGAGAGCAGAGTGTCGCCGGGAGGCTCCTCAGCGAAAGAATGGGTCTGGTGTC CAAGAAGGTGTCAAGGGCTTGAAATCACTAGGAGTACGAGATCTGTCATATCGCCTTGCT TTTGTAGCAAACTCAGTGCAGGTGGCGGATGGAAGGAGAGAAGTCGACATCCGGGACAGG GACATAGATGGAGATGACAGCGAAAGACAGAAGTTCACTGAAGAAGAGGAAGATGAAGTT GTTAGGATGAGGAACGTTCCTGATTTTTTCAATAAGATAGTTGATAGCATATGTCCCACT GTCTTTGGGCATCAAGAAATTAAGAGAGCAATCCTTCTCATGCTTTTGGGTGGTGTTCAC AAGATAACACATGAAGGGATAAACCTTAGAGGTGACATCAATGTCTGTATTGTTGGTGAT CCAAGTTGTGCGAAGTCTCAGTTCTTAAAATATACCGCTGGTATTGTTCCACGATCTGTT TACACATCAGGGAAGTCCTCATCTGCTGCTGGTTTGACAGCAACTGTTGCTAAAGAACCA GAGACTGGCGAATTTTGCATTGAGGCAGGAGCACTCATGTTAGCTGATAATGGCATCTGC TGCATTGATGAATTTGATAAAATGGACATCAAAGATCAGGTTGCTATACATGAAGCAATG GAACAGCAAACCATTAGCATAACAAAAGCAGGAATACAAGCAACTTTGAATGCAAGGACT TCAATTTTGGCAGCAGCAAATCCCACAGGAGGGCGTTATGACAAGTCAAAACCACTCAAG TATAACGTGGCATTGCCTCCAGCTATTCTTTCAAGATTTGATCTGGTATACATAATGATC GATGAGCCTGATGAAAACACTGACTACCACATTGCTCATCACATTGTGAGGGTCCATCAG AAACGTGAAGAAGCACTTGCCCCTGCATTTAGCACGGCAGAATTGAAACGTTACATTGCT TTTGCGAAGTCCTTGAAACCTCAGCTGAGTTCTGAAGCAAAGAAAGTTCTGGTTGAATCA TATGTTACCCTTCGTAGAGGAGATAGTACCCCTGGTACTAGGGTTGCTTATAGGATGACA GTTAGGCAACTAGAGGCATTAATCAGGCTTTCAGAAGCTATTGCCCGAAGTCATTTGGAA AGAGTTGTTCTCCCAGCCCATGTTCGCATGGCAGTTAAATTGCTCAAGACATCCATCATC AGCGTGGAATCAAGTGAAGTTGATCTCTCTGATTTCCAAGATGCTGATGATGGCACAAAT GTACCAGCCGATAATGATGCTGGTCAGCCAACAGAAATGGATGCTGCTCCTCAACAAGAC GGTCCAGAAAATGAGCAAGCGGCAGATACTGGTAAGAAGAAGTTGGTTATAACCGAAGAA CATTTCCAGAGAGTCACGCAAGCTTTAGTTATGAGACTACGGCAGCATGAAGAGTCTGTC ACGAAAGATGGAGATGGTCTGGCTGGCATGAAGCAAGGGGATCTGATAATTTGGTATGTT GAGCAGCAGAATGCCCAAGGAGCCTATAGTTCTACAGCAGAGGTGAAGGAAGAAGTGAAG TGCATCAAGGCCATCATAGAGAGGTTAATACAGAGGGATGGCCATCTCATAGTGATAGAC GAAGGAGCAGCCCCAGCGGCTGACGACGGTGCTGCACGAAGAACATCAGAGAGCAGAATC CTGGCAGTTAATCCGAACTATGTCATCGATTAA

Peptide Sequence

PEP ID	Os05t0235800-01
PEP Infomation	pep chromosome:IRGSP-1.0:5:8312907:8319399:1 gene:Os05g0235800 transcript:Os05t0235800-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:MINI-CHROMOSOME MAINTENANCE PROTEIN 6 description:DNA-dependent ATPase MCM domain containing protein. (Os05t0235800-01)
Sequence	MEAFGGFFVDEKAARVENIFLEFLRRFKEADAAEAFYETELEAMRSRESTTMYVDFAHVM RFNDVLQKAISEEYLRFEPYLRNACKRFVMEQRTGENRAPIISDDSPNKDINIAFYNIPM LKRLRELGTAEIGKLTAVMGVVTRTSEVRPELLQGTFKCLDCGNVVKNVEQQFKYTEPII CVNATCQNRSKWALLRQESKFTDWQRVRMQETSKEIPAGSLPRSLDVILRHEIVEKARAG DTVIFTGTVVAVPDVMALTSPGERAECRREAPQRKNGSGVQEGVKGLKSLGVRDLSYRLA FVANSVQVADGRREVDIRDRDIDGDDSERQKFTEEEEDEVVRMRNVPDFFNKIVDSICPT VFGHQEIKRAILLMLLGGVHKITHEGINLRGDINVCIVGDPSCAKSQFLKYTAGIVPRSV YTSGKSSSAAGLTATVAKEPETGEFCIEAGALMLADNGICCIDEFDKMDIKDQVAIHEAM EQQTISITKAGIQATLNARTSILAAANPTGGRYDKSKPLKYNVALPPAILSRFDLVYIMI DEPDENTDYHIAHHIVRVHQKREEALAPAFSTAELKRYIAFAKSLKPQLSSEAKKVLVES YVTLRRGDSTPGTRVAYRMTVRQLEALIRLSEAIARSHLERVVLPAHVRMAVKLLKTSII SVESSEVDLSDFQDADDGTNVPADNDAGQPTEMDAAPQQDGPENEQAADTGKKKLVITEE HFQRVTQALVMRLRQHEESVTKDGDGLAGMKQGDLIIWYVEQQNAQGAYSSTAEVKEEVK CIKAIIERLIQRDGHLIVIDEGAAPAADDGAARRTSESRILAVNPNYVID

Transcript Sequence

Transcript ID	Os05t0235800-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:5:8312907:8319399:1 gene:Os05g0235800 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:MINI-CHROMOSOME MAINTENANCE PROTEIN 6 description:DNA-dependent ATPase MCM domain containing protein. (Os05t0235800-01)
Sequence	CTTGTTCCCCCAACCAAAACCCTCGCGCCCCCGCCGCACCACCCGCGCAGCCGCACAGCG CAAATCCCCCCCACCCCGCGCAAGGTTTCGAGAGGTCTCGTCGGAGATGGAGGCGTTCGG CGGGTTCTTCGTGGACGAGAAGGCGGCGCGGGTGGAGAACATCTTCCTCGAGTTCCTCAG GCGGTTCAAGGAGGCGGATGCGGCGGAGGCGTTCTACGAGACGGAGCTGGAGGCGATGCG GTCGCGGGAGTCCACCACCATGTACGTCGACTTCGCCCACGTCATGCGATTCAACGACGT CCTCCAGAAGGCCATCTCCGAGGAGTATCTCAGGTTCGAGCCGTACCTCCGGAATGCGTG CAAGAGGTTTGTGATGGAGCAGAGGACTGGCGAGAACCGTGCACCAATCATCTCTGATGA TAGCCCTAACAAGGACATTAACATTGCCTTCTACAACATACCAATGCTGAAGAGGTTGAG GGAGCTTGGAACAGCAGAGATTGGTAAGCTCACGGCTGTAATGGGGGTGGTTACACGGAC AAGTGAGGTCCGGCCTGAGTTACTGCAAGGCACCTTCAAGTGCCTTGACTGTGGAAATGT TGTAAAGAATGTTGAGCAGCAGTTCAAGTATACTGAGCCAATAATATGTGTCAATGCAAC ATGCCAAAATCGATCAAAATGGGCCCTTCTCCGACAAGAGAGCAAGTTCACAGATTGGCA GCGGGTCAGGATGCAGGAGACATCAAAAGAAATACCTGCTGGTTCACTACCACGCTCCCT GGATGTCATTCTGAGGCATGAGATTGTTGAGAAGGCTAGAGCTGGAGACACGGTCATATT TACTGGAACTGTTGTTGCTGTTCCTGATGTTATGGCTCTAACTTCACCTGGTGAGAGAGC AGAGTGTCGCCGGGAGGCTCCTCAGCGAAAGAATGGGTCTGGTGTCCAAGAAGGTGTCAA GGGCTTGAAATCACTAGGAGTACGAGATCTGTCATATCGCCTTGCTTTTGTAGCAAACTC AGTGCAGGTGGCGGATGGAAGGAGAGAAGTCGACATCCGGGACAGGGACATAGATGGAGA TGACAGCGAAAGACAGAAGTTCACTGAAGAAGAGGAAGATGAAGTTGTTAGGATGAGGAA CGTTCCTGATTTTTTCAATAAGATAGTTGATAGCATATGTCCCACTGTCTTTGGGCATCA AGAAATTAAGAGAGCAATCCTTCTCATGCTTTTGGGTGGTGTTCACAAGATAACACATGA AGGGATAAACCTTAGAGGTGACATCAATGTCTGTATTGTTGGTGATCCAAGTTGTGCGAA GTCTCAGTTCTTAAAATATACCGCTGGTATTGTTCCACGATCTGTTTACACATCAGGGAA GTCCTCATCTGCTGCTGGTTTGACAGCAACTGTTGCTAAAGAACCAGAGACTGGCGAATT TTGCATTGAGGCAGGAGCACTCATGTTAGCTGATAATGGCATCTGCTGCATTGATGAATT TGATAAAATGGACATCAAAGATCAGGTTGCTATACATGAAGCAATGGAACAGCAAACCAT TAGCATAACAAAAGCAGGAATACAAGCAACTTTGAATGCAAGGACTTCAATTTTGGCAGC AGCAAATCCCACAGGAGGGCGTTATGACAAGTCAAAACCACTCAAGTATAACGTGGCATT GCCTCCAGCTATTCTTTCAAGATTTGATCTGGTATACATAATGATCGATGAGCCTGATGA AAACACTGACTACCACATTGCTCATCACATTGTGAGGGTCCATCAGAAACGTGAAGAAGC ACTTGCCCCTGCATTTAGCACGGCAGAATTGAAACGTTACATTGCTTTTGCGAAGTCCTT GAAACCTCAGCTGAGTTCTGAAGCAAAGAAAGTTCTGGTTGAATCATATGTTACCCTTCG TAGAGGAGATAGTACCCCTGGTACTAGGGTTGCTTATAGGATGACAGTTAGGCAACTAGA GGCATTAATCAGGCTTTCAGAAGCTATTGCCCGAAGTCATTTGGAAAGAGTTGTTCTCCC AGCCCATGTTCGCATGGCAGTTAAATTGCTCAAGACATCCATCATCAGCGTGGAATCAAG TGAAGTTGATCTCTCTGATTTCCAAGATGCTGATGATGGCACAAATGTACCAGCCGATAA TGATGCTGGTCAGCCAACAGAAATGGATGCTGCTCCTCAACAAGACGGTCCAGAAAATGA GCAAGCGGCAGATACTGGTAAGAAGAAGTTGGTTATAACCGAAGAACATTTCCAGAGAGT CACGCAAGCTTTAGTTATGAGACTACGGCAGCATGAAGAGTCTGTCACGAAAGATGGAGA TGGTCTGGCTGGCATGAAGCAAGGGGATCTGATAATTTGGTATGTTGAGCAGCAGAATGC CCAAGGAGCCTATAGTTCTACAGCAGAGGTGAAGGAAGAAGTGAAGTGCATCAAGGCCAT CATAGAGAGGTTAATACAGAGGGATGGCCATCTCATAGTGATAGACGAAGGAGCAGCCCC AGCGGCTGACGACGGTGCTGCACGAAGAACATCAGAGAGCAGAATCCTGGCAGTTAATCC GAACTATGTCATCGATTAACCATCTGAATTATGATACGCAGCTAACACAATCCAATCGAT GTGGTTAACCGATAGAACCAAGAGTAGATTCTAGTGAGAACCCCTGGTGGGTTATGCTAT GCACTAGACATGTACCATTTCCAACTGTGGTAGTCTTTGCAATTGAGTATATGATCTCTT GACAAATTGTACAATTAATTCTTGGAAGCAAAGGTGTAGTCAGAGTTATAGTTGATGATA ACTATAATCGGTAGTGTGCCTGTGTACATTTTCTTAGAGTTGGTTGAACTATGTGAGGGC TTTGGAGTTTGGAGAAGCTTGAATTTTCAAGTGCTTGCTGTGCTTCTAACGTGTATCATT CAGATTCAGATGATTCGAGAAACGTACCTTTGGCT