Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os05t0228000-02
CDS Infomation	cds chromosome:IRGSP-1.0:5:7775450:7780892:-1 gene:Os05g0228000 gene_biotype:protein_coding transcript_biotype:protein_coding description:Purine and other phosphorylases, family 1 protein. (Os05t0228000-01);Purine and other phosphorylases, family 1 protein. (Os05t0228000-02)
Sequence	ATGGCTGCTCGGTCGTCGTCGTCGCCGGCGAAGACGACGACGACGCTGGCTTTGCTGTTG GTGGTCGCGGCGGCGGCCGCTGCTGTGGCGGCGGAGGCGGCGGCCGTGGCGGCGGACGCG GCGCGGGGCGTCCGGCAAGTGAACCGGCGGGGCCCGTACCTGGGCGTGGTGGTGCCCAAC GGGTTCGAGATGGAGCCGCTCCTCCGCTCGCCGGCCTTCTCGCCGGCCAAGAAGCTGCCA TACCTCGACGTCGCAGGAAGGAGATTTCGCTTCGGATCGATAGGAGAGAAGAAGGTGATC ATCGTCATGACAGGCCTCGGCATGCTCAACTCCGGCGTGACCACCCAGCTCCTCCTCACC CTCTTCGACGTCGAGGGCATCGTCCACTTCGGCATCGCCGGCAACGCCGACCCCGACCTC CACATCGGCGACGTCACCGTCCCCCGCTACTGGGCGCACACCGGACTCTGGAACTGGCAG CGGTACGGCGATGGGCCGGAGAAGGAGCTCGCGCTGGAGTCCAATGGCGACTACACGAGG AAGTACGGGGCGCTCAACTTCTCCGACTACGGCGTCGCCGGCGGCGGCGGCGGCAACCTG CTGAACGGCGTGTGGTACCAGCCGGAGGAGGTGTTCCCGGCGGACGGCACGCCGGAGTCT CGCCGCCACGAGTTCTGGGTCCCCGTCGACGGCCGGTACTACCAGCTCGCCCAGAAGCTG GAGGCGATGCCGCTGGAGCGCTGCGTCAACCGCACCGGGACGGCGACGTCGCCGGCGACG TGCCTGGCGCGGGCGCCGGCGGTGGCGCGCGTGGAGCGCGGGTGCAGCGCCAGCGTGTTC GTGGACAACGCGGCGTACAGGCAGTTCCTGCGGTCCAGGCTGGGCGTGACGCCGATCGAC ATGGAGTCGGCCGCCGTCGCGCTGGTGGCGGCGCAGCAGGGGGCGCCGTTCATCGCCATA CGGTCGCTCTCCGACCTCGCCGGCGGCGGCTCCGCGGAGTCCAACGAGGCCGGCGTGTTC GCGGCGCTGGCGGCGCAGAACGCGGTGGCCGTCGCCGTCAAGTTCATATCGCTCTTAAGC TAA

Peptide Sequence

PEP ID	Os05t0228000-02
PEP Infomation	pep chromosome:IRGSP-1.0:5:7775450:7780892:-1 gene:Os05g0228000 transcript:Os05t0228000-02 gene_biotype:protein_coding transcript_biotype:protein_coding description:Purine and other phosphorylases, family 1 protein. (Os05t0228000-01);Purine and other phosphorylases, family 1 protein. (Os05t0228000-02)
Sequence	MAARSSSSPAKTTTTLALLLVVAAAAAAVAAEAAAVAADAARGVRQVNRRGPYLGVVVPN GFEMEPLLRSPAFSPAKKLPYLDVAGRRFRFGSIGEKKVIIVMTGLGMLNSGVTTQLLLT LFDVEGIVHFGIAGNADPDLHIGDVTVPRYWAHTGLWNWQRYGDGPEKELALESNGDYTR KYGALNFSDYGVAGGGGGNLLNGVWYQPEEVFPADGTPESRRHEFWVPVDGRYYQLAQKL EAMPLERCVNRTGTATSPATCLARAPAVARVERGCSASVFVDNAAYRQFLRSRLGVTPID MESAAVALVAAQQGAPFIAIRSLSDLAGGGSAESNEAGVFAALAAQNAVAVAVKFISLLS

Transcript Sequence

Transcript ID	Os05t0228000-02
Transcript Infomation	cdna chromosome:IRGSP-1.0:5:7775450:7780892:-1 gene:Os05g0228000 gene_biotype:protein_coding transcript_biotype:protein_coding description:Purine and other phosphorylases, family 1 protein. (Os05t0228000-01);Purine and other phosphorylases, family 1 protein. (Os05t0228000-02)
Sequence	ATCTCGTTCTTCCCACACACGCGCGCACACACACATCTTGTGTGAGACTTGTATGATCGA TTGCTAGAGCTATTTCGATTCGTCACGTTATACGCATACGCGTTATTAGCTTAGTTCATT AGCTCAAGGTTAATTAATTAACGACATGGCTGCTCGGTCGTCGTCGTCGCCGGCGAAGAC GACGACGACGCTGGCTTTGCTGTTGGTGGTCGCGGCGGCGGCCGCTGCTGTGGCGGCGGA GGCGGCGGCCGTGGCGGCGGACGCGGCGCGGGGCGTCCGGCAAGTGAACCGGCGGGGCCC GTACCTGGGCGTGGTGGTGCCCAACGGGTTCGAGATGGAGCCGCTCCTCCGCTCGCCGGC CTTCTCGCCGGCCAAGAAGCTGCCATACCTCGACGTCGCAGGAAGGAGATTTCGCTTCGG ATCGATAGGAGAGAAGAAGGTGATCATCGTCATGACAGGCCTCGGCATGCTCAACTCCGG CGTGACCACCCAGCTCCTCCTCACCCTCTTCGACGTCGAGGGCATCGTCCACTTCGGCAT CGCCGGCAACGCCGACCCCGACCTCCACATCGGCGACGTCACCGTCCCCCGCTACTGGGC GCACACCGGACTCTGGAACTGGCAGCGGTACGGCGATGGGCCGGAGAAGGAGCTCGCGCT GGAGTCCAATGGCGACTACACGAGGAAGTACGGGGCGCTCAACTTCTCCGACTACGGCGT CGCCGGCGGCGGCGGCGGCAACCTGCTGAACGGCGTGTGGTACCAGCCGGAGGAGGTGTT CCCGGCGGACGGCACGCCGGAGTCTCGCCGCCACGAGTTCTGGGTCCCCGTCGACGGCCG GTACTACCAGCTCGCCCAGAAGCTGGAGGCGATGCCGCTGGAGCGCTGCGTCAACCGCAC CGGGACGGCGACGTCGCCGGCGACGTGCCTGGCGCGGGCGCCGGCGGTGGCGCGCGTGGA GCGCGGGTGCAGCGCCAGCGTGTTCGTGGACAACGCGGCGTACAGGCAGTTCCTGCGGTC CAGGCTGGGCGTGACGCCGATCGACATGGAGTCGGCCGCCGTCGCGCTGGTGGCGGCGCA GCAGGGGGCGCCGTTCATCGCCATACGGTCGCTCTCCGACCTCGCCGGCGGCGGCTCCGC GGAGTCCAACGAGGCCGGCGTGTTCGCGGCGCTGGCGGCGCAGAACGCGGTGGCCGTCGC CGTCAAGTTCATATCGCTCTTAAGCTAAGAAGCTGTCTTAACCATCGTCGATGAAGGTTG AGAATGATAACCCTATAATGGTAATTAATTAGAAGTGTTACCTCGTGTGTTGTTCACGAT AGACGTTATTGTTCTGATTAAACTTTATATTATTGACACATTTTTTAAAAAAGAAACAGT TAAATC