Gene sequences

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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os05t0227800-01
CDS Infomation	cds chromosome:IRGSP-1.0:5:7768465:7770413:1 gene:Os05g0227800 gene_biotype:protein_coding transcript_biotype:protein_coding description:Homeodomain-like containing protein. (Os05t0227800-01)
Sequence	ATGGATGGAGACAGTTGTTATGTTAACTCACTGGTTGTTAAAATCAACTCGCCAGAGTGG GATGATGGCACCATGATGGGGGCTAGTCCACCCGAGGAGCAACATTCAACGGTCGAAGAA GTTGTTGTCGTGAGACGAAACCAGAAAAGAACAAAGAATTTCAGCGGGAAGGAAGACGAA GGGTTGGTTTCGGCATGGTTGAATGTTAGTAAGGATGTAGTCCAAGGCATCGAACAATCT CGTTGTGCATACTGGAAGAGAATTTACGATTACTTCCACGCAAACAAGGACTTCACCTCA GACCGTTCTCAAAATTCCCTCATGCACCGCTGGTCTACTATTCAAGAGAATGTGACCAAG TTCGAGGGTTGTCTAAGCCGGATTGGGGATAGAAAGCAAAGCTGGGTTTCAAGTCAAGAT AAGATTATGCATGCATGTGCTCTGTACAAGGCCGAAGATGAGAACCATAGGCCATTTCAC ATGATGCACTGTTGGAATCTCTTGAGAAACCAGCAAAAATGGATTGATAGGTCGTCTCAG CTGCCATCTCACAAAAAACAGAAGATAACCAACAATTCAAGTCTAGGTATGTCTACTACT ACTACTGATGATACTGCGGCTGCTCCTCCTCCTCCTCCAGGATTTGAGTTATCGAAGACT CCAGAAAGTATTAATGCTCCTCCAAGATGTGAGTTATCTGAGAGACCAGAAAGTAGGAAT GCTCCTCCAAGATGTGAGTTATCTGAGAGACCAGAAAATAGGAAGGGGGAGAAAGAAAAA CTACGACGAGGTGGAGATGTGGTCTTTGTGGAGGATTTAGATGATTTGTTGGCAAAGAAG AAAGAGGCAGATGTGGAGAAAGAGCTCAAGAAAGATGAGAGATATATACAATCACATGCC CTAGAGCAAGAGAAGGTTGCACTAGAACAAGCGAAGGTTGCAAACGAGACAAAAAATCTT GAGATGAGGAGCAAAGAATTAGAATTGAAGACCAAGGAGATAGATTTGAAAAGAATGTTA GAAGAAGAGAGGATTATGACTATGGATATTAGTGCCATGTCTGGGCTACAACAACAATAT TACAAGAGCTTGCAGGAGGAGATCGTCACTCGACGATTTAATAGCTCGGGTTGA

Peptide Sequence

PEP ID	Os05t0227800-01
PEP Infomation	pep chromosome:IRGSP-1.0:5:7768465:7770413:1 gene:Os05g0227800 transcript:Os05t0227800-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Homeodomain-like containing protein. (Os05t0227800-01)
Sequence	MDGDSCYVNSLVVKINSPEWDDGTMMGASPPEEQHSTVEEVVVVRRNQKRTKNFSGKEDE GLVSAWLNVSKDVVQGIEQSRCAYWKRIYDYFHANKDFTSDRSQNSLMHRWSTIQENVTK FEGCLSRIGDRKQSWVSSQDKIMHACALYKAEDENHRPFHMMHCWNLLRNQQKWIDRSSQ LPSHKKQKITNNSSLGMSTTTTDDTAAAPPPPPGFELSKTPESINAPPRCELSERPESRN APPRCELSERPENRKGEKEKLRRGGDVVFVEDLDDLLAKKKEADVEKELKKDERYIQSHA LEQEKVALEQAKVANETKNLEMRSKELELKTKEIDLKRMLEEERIMTMDISAMSGLQQQY YKSLQEEIVTRRFNSSG

Transcript Sequence

Transcript ID	Os05t0227800-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:5:7768465:7770413:1 gene:Os05g0227800 gene_biotype:protein_coding transcript_biotype:protein_coding description:Homeodomain-like containing protein. (Os05t0227800-01)
Sequence	AAGGCTCCATCCTCGCTAGTTGTGGCGAGCCCCAAAACCAACTCCCAATCCGCATCTCCC TCCGCTGCGCCGGCGCCGCCGCCCGCCGCCGCCGTGGCCCGGCCGTCGGCTCGCCTCCGC CTCCATCCTCGGGCACCGGACGTCGTCCCCGCCGCCCGGAGGCCGACCCCTTTGCCTCCT TAGGCCTTCTGCCCTAGTTCCGGCGGCCTGGCTCTAAATTCGGCCGCAGCCGGCGCAGGT CGATCACCGCCCGCGCGCCATTGGAAGCGGAGGTGGAGAAAGGAAGCTGGCATTGGTGCG TGATTGAAATGCTGACCTGATTTTTTTTAGTACATTGAGGATTAGCGATGGATGGAGACA GTTGTTATGTTAACTCACTGGTTGTTAAAATCAACTCGCCAGAGTGGGATGATGGCACCA TGATGGGGGCTAGTCCACCCGAGGAGCAACATTCAACGGTCGAAGAAGTTGTTGTCGTGA GACGAAACCAGAAAAGAACAAAGAATTTCAGCGGGAAGGAAGACGAAGGGTTGGTTTCGG CATGGTTGAATGTTAGTAAGGATGTAGTCCAAGGCATCGAACAATCTCGTTGTGCATACT GGAAGAGAATTTACGATTACTTCCACGCAAACAAGGACTTCACCTCAGACCGTTCTCAAA ATTCCCTCATGCACCGCTGGTCTACTATTCAAGAGAATGTGACCAAGTTCGAGGGTTGTC TAAGCCGGATTGGGGATAGAAAGCAAAGCTGGGTTTCAAGTCAAGATAAGATTATGCATG CATGTGCTCTGTACAAGGCCGAAGATGAGAACCATAGGCCATTTCACATGATGCACTGTT GGAATCTCTTGAGAAACCAGCAAAAATGGATTGATAGGTCGTCTCAGCTGCCATCTCACA AAAAACAGAAGATAACCAACAATTCAAGTCTAGGTATGTCTACTACTACTACTGATGATA CTGCGGCTGCTCCTCCTCCTCCTCCAGGATTTGAGTTATCGAAGACTCCAGAAAGTATTA ATGCTCCTCCAAGATGTGAGTTATCTGAGAGACCAGAAAGTAGGAATGCTCCTCCAAGAT GTGAGTTATCTGAGAGACCAGAAAATAGGAAGGGGGAGAAAGAAAAACTACGACGAGGTG GAGATGTGGTCTTTGTGGAGGATTTAGATGATTTGTTGGCAAAGAAGAAAGAGGCAGATG TGGAGAAAGAGCTCAAGAAAGATGAGAGATATATACAATCACATGCCCTAGAGCAAGAGA AGGTTGCACTAGAACAAGCGAAGGTTGCAAACGAGACAAAAAATCTTGAGATGAGGAGCA AAGAATTAGAATTGAAGACCAAGGAGATAGATTTGAAAAGAATGTTAGAAGAAGAGAGGA TTATGACTATGGATATTAGTGCCATGTCTGGGCTACAACAACAATATTACAAGAGCTTGC AGGAGGAGATCGTCACTCGACGATTTAATAGCTCGGGTTGACCTCGTATGTCTATTATTG TTGTTACGGACTATTATGTTTTGCGAACCATGTTGAAGTCGTATAGAGAATTATGGTAAA CAGCAAACCTTGTT