Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os05t0214400-00
CDS Infomation

cds chromosome:IRGSP-1.0:5:7087058:7088616:-1 gene:Os05g0214400 gene_biotype:protein_coding transcript_biotype:protein_coding description:Esterase/lipase/thioesterase domain containing protein. (Os05t0214400-00)
Sequence

ATGGCCCCGAAGCGCCGCCGTGCCCGTCCGGCGGACGAGAGCTCGACGCCGCCGCCGCCG
CCTCCTCCCTTGCGGACGGCGCCTTCGCATTTGCAGCCGGTGGTTGTTTTCGCCCACGGC
GCCGGCGCCCCCTCTTCATCCGACTGGATGGTCCATTGGAAGGATATGGTGAAGGATGCG
CTCGATGCTATCGAAGTTGTCACCTTTGATTACCCATATATGTCAGGTGGGAAGCGCAGG
GCTCCGCCGAAGGCGGAGAAGCTTGTTGATCATCACCTTGGTGTGGTGAAGGACGCTGTA
GCGAAGCATCCAGGGCACCCACTTGTTCTGATGGGGAAGTCTATGGGTTCAAGGGTCAGC
TGTATGGTGGCTGATTCAGATGATATTATTGTTTCTGCTGTCATATGCTTGGGTTATCCG
TTAAAGGGAGTGAACGGGGCAGTGAGGGATGAGACACTACTGAAACTGAAGATTCCAACA
ATGTTTGTGCAGGGCAATAAAGATGGGTTATGCCCTTTGGATAAGCTTGAGGCCACTCGC
AAGAAGATGAACTGCAAGAATGAACTGCATGTTATTGATGGTGGTGACCACTCCTTTAAA
ATCGGCAAAAAGTATCAAGAGTCTACTGGAGTGAATCAACAAGCTGCAGAAATGGAAGCT
GTTAAAGCTATTGCAAAATTTGTGCAGAACTCCATAGCAGGAACCTGA

Peptide Sequence

PEP ID

Os05t0214400-00
PEP Infomation

pep chromosome:IRGSP-1.0:5:7087058:7088616:-1 gene:Os05g0214400 transcript:Os05t0214400-00 gene_biotype:protein_coding transcript_biotype:protein_coding description:Esterase/lipase/thioesterase domain containing protein. (Os05t0214400-00)
Sequence

MAPKRRRARPADESSTPPPPPPPLRTAPSHLQPVVVFAHGAGAPSSSDWMVHWKDMVKDA
LDAIEVVTFDYPYMSGGKRRAPPKAEKLVDHHLGVVKDAVAKHPGHPLVLMGKSMGSRVS
CMVADSDDIIVSAVICLGYPLKGVNGAVRDETLLKLKIPTMFVQGNKDGLCPLDKLEATR
KKMNCKNELHVIDGGDHSFKIGKKYQESTGVNQQAAEMEAVKAIAKFVQNSIAGT

Transcript Sequence

Transcript ID

Os05t0214400-00
Transcript Infomation

cdna chromosome:IRGSP-1.0:5:7087058:7088616:-1 gene:Os05g0214400 gene_biotype:protein_coding transcript_biotype:protein_coding description:Esterase/lipase/thioesterase domain containing protein. (Os05t0214400-00)
Sequence

GCGGGAAAGCCGAGGAGTTTCCCGCCCTGTAGCGCCCGCCGCTTCACTCCCTCCCAATCC
CCCCTCCTAAACCCAGCTAGGTTTCCGCCTCTCTCACCATCTCCATCTCCATGGCCCCGA
AGCGCCGCCGTGCCCGTCCGGCGGACGAGAGCTCGACGCCGCCGCCGCCGCCTCCTCCCT
TGCGGACGGCGCCTTCGCATTTGCAGCCGGTGGTTGTTTTCGCCCACGGCGCCGGCGCCC
CCTCTTCATCCGACTGGATGGTCCATTGGAAGGATATGGTGAAGGATGCGCTCGATGCTA
TCGAAGTTGTCACCTTTGATTACCCATATATGTCAGGTGGGAAGCGCAGGGCTCCGCCGA
AGGCGGAGAAGCTTGTTGATCATCACCTTGGTGTGGTGAAGGACGCTGTAGCGAAGCATC
CAGGGCACCCACTTGTTCTGATGGGGAAGTCTATGGGTTCAAGGGTCAGCTGTATGGTGG
CTGATTCAGATGATATTATTGTTTCTGCTGTCATATGCTTGGGTTATCCGTTAAAGGGAG
TGAACGGGGCAGTGAGGGATGAGACACTACTGAAACTGAAGATTCCAACAATGTTTGTGC
AGGGCAATAAAGATGGGTTATGCCCTTTGGATAAGCTTGAGGCCACTCGCAAGAAGATGA
ACTGCAAGAATGAACTGCATGTTATTGATGGTGGTGACCACTCCTTTAAAATCGGCAAAA
AGTATCAAGAGTCTACTGGAGTGAATCAACAAGCTGCAGAAATGGAAGCTGTTAAAGCTA
TTGCAAAATTTGTGCAGAACTCCATAGCAGGAACCTGAACTTAGCTGTTTATGTACTATT
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