Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os05t0212200-01
CDS Infomation	cds chromosome:IRGSP-1.0:5:6936886:6939746:-1 gene:Os05g0212200 gene_biotype:protein_coding transcript_biotype:protein_coding description:Hypothetical conserved gene. (Os05t0212200-01)
Sequence	ATGGCGTCCGCCTCCGCCTCCGCCGGTGGCGGCGGCGGCGGCGGCGAGACGCCGCTGGTC GACCGCTGCATCGACGCGGCGGCGGGCGGGGCCGCCACCGTGGAGGCGTGGCGCCGCCAG CGCCGCTCCCTGGAGCGCCTCCCCGCGCAGCTCGCCGACGCGCTCCTCCGCCGCCTCGCC GCCCGCCGCCTCCTCTTCCCTTCCCTCCTCGAGGTTTTCCAGCACTCGGTGGAGGAGATC GATCTGAGCGGTCACATCGCCGTCGACGCGGAGTGGCTGGCTTACCTAGGAGCATTCCGG TATCTGAGGGTTCTGAAGCTTGCGGATTGCAAGAACGTCAACAGTTCTGCGGTCTGGGCG CTCTCCGGTATGCGTACGTTGAAAGAGTTGGATTTGTCAAGGTGCTCCAAGATCTCTGAT GCTGGCATCAAACATATCGCTTCCATTGAAAGCTTGGAGAAGCTACATGTTTCGCAAACC GGGTTGACTGACAATGGAGTTATGGCCATTTCGTCGCTGATAAACTTACGTTTATTAGAT TTGGGGGGAGTTCGTTTCACAGACAAAGCACTACGGTCTTTACAGGTATTGACACAGCTC GAGCACCTTGATATATGGGGCAGTGAAATTACCAATGAGGGAGCTTCTGTCCTTATTGCA TTTACATCTTTGAGCTTCTTGAATATTTCTTGGACACGTGTGACATGCTTACCAATTCTT CCGACCTTGAGGTGTCTAAATATGAGCAACTGCACAATTCATTCTATTTGCAATGGGGAA TTCCAAGTTCTTATTCATCTGGAAAAGTTGATTATCTCCGCAGCATCATTTGGCAACATT GATGAAGTTTTTTCAAGCATCCTACCAAGTTCACTGACATACTTGGATATGTCAAGTTGC TCTTCAAGCAACTTGTATTTCTTGGGAAATATGAGGAATCTAGAGCACTTGGACCTTAGC TACAGCAGAATAATTAGCGATGCAATTGAATATATTGCAAATATTGGAATGAACCTTAAG TTTTTGAGCCTGAGTAATTCTGAAGTAACTTCTCAAGCACTGTGTGTTCTGGCAGGAACA GTTCCAAGTCTGACAACACTGTCTTTAGCTCATACAAAAATTGATGATTCTGCTTTATTA TACATAAGCATGATGCCTTCACTGAGAATTTTAAACCTGAGTCGCACATGTATCAAAGGT TTCATGATGGAAAACTCTGTGAAAGTACTGTCTCTCTCTGCGCTTGAAGAACTCAAATAC CTGGAAAGCCTAAATTTGAATAATACACAGCTGATGGATGATGTTATACCTCCCTTAGCA TCCCTTAGAGCACTGAAATATTTGTTCCTAAAAAGTGATTTCTTGTCTGATCCTGCCTTG CATGCACTGTCTTCTGCCTCAAATTTGATACATCTTGGGTTCTGTGGGAATATATTGTCC ACCACTGGGCTTAGAAAGTTTGTTCCCCCTGCCACGCTGCGTATGTTGGATTTAAGCGGC TGTTGGATCTTAACAGGAGATGCAATTTCAGCATTCTGTACGTGTCACCCTGTGATTGAA GTGAGACATGAGCTTATACAGGAACTTCAGGCAAATTATGGTGGTACTTCGCATCTTCAC AAGTCCTCTAGACAACCTCAACAGGTAAAAGCAAAAGTGGCAAAAAGTTCGGCTGGCCCA AGTAGACTTGCTGAAATCTGCTTTGTAGATGAAAGAATAAAGTACAGCAAGGAAGAAATG ATGGAGCTTCAACACCAAGCTAAATCAAATTCTTCAATGCATGTTGCGCAACTTCCACCA GAACTGCGAAGATCAGTCTGA

Peptide Sequence

PEP ID	Os05t0212200-01
PEP Infomation	pep chromosome:IRGSP-1.0:5:6936886:6939746:-1 gene:Os05g0212200 transcript:Os05t0212200-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Hypothetical conserved gene. (Os05t0212200-01)
Sequence	MASASASAGGGGGGGETPLVDRCIDAAAGGAATVEAWRRQRRSLERLPAQLADALLRRLA ARRLLFPSLLEVFQHSVEEIDLSGHIAVDAEWLAYLGAFRYLRVLKLADCKNVNSSAVWA LSGMRTLKELDLSRCSKISDAGIKHIASIESLEKLHVSQTGLTDNGVMAISSLINLRLLD LGGVRFTDKALRSLQVLTQLEHLDIWGSEITNEGASVLIAFTSLSFLNISWTRVTCLPIL PTLRCLNMSNCTIHSICNGEFQVLIHLEKLIISAASFGNIDEVFSSILPSSLTYLDMSSC SSSNLYFLGNMRNLEHLDLSYSRIISDAIEYIANIGMNLKFLSLSNSEVTSQALCVLAGT VPSLTTLSLAHTKIDDSALLYISMMPSLRILNLSRTCIKGFMMENSVKVLSLSALEELKY LESLNLNNTQLMDDVIPPLASLRALKYLFLKSDFLSDPALHALSSASNLIHLGFCGNILS TTGLRKFVPPATLRMLDLSGCWILTGDAISAFCTCHPVIEVRHELIQELQANYGGTSHLH KSSRQPQQVKAKVAKSSAGPSRLAEICFVDERIKYSKEEMMELQHQAKSNSSMHVAQLPP ELRRSV

Transcript Sequence

Transcript ID	Os05t0212200-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:5:6936886:6939746:-1 gene:Os05g0212200 gene_biotype:protein_coding transcript_biotype:protein_coding description:Hypothetical conserved gene. (Os05t0212200-01)
Sequence	CCCCCCACTTCTCCCGTTGAGCTCGCGCCGCGGCGACGCCGTCTTGCCCATGGCGTCCGC CTCCGCCTCCGCCGGTGGCGGCGGCGGCGGCGGCGAGACGCCGCTGGTCGACCGCTGCAT CGACGCGGCGGCGGGCGGGGCCGCCACCGTGGAGGCGTGGCGCCGCCAGCGCCGCTCCCT GGAGCGCCTCCCCGCGCAGCTCGCCGACGCGCTCCTCCGCCGCCTCGCCGCCCGCCGCCT CCTCTTCCCTTCCCTCCTCGAGGTTTTCCAGCACTCGGTGGAGGAGATCGATCTGAGCGG TCACATCGCCGTCGACGCGGAGTGGCTGGCTTACCTAGGAGCATTCCGGTATCTGAGGGT TCTGAAGCTTGCGGATTGCAAGAACGTCAACAGTTCTGCGGTCTGGGCGCTCTCCGGTAT GCGTACGTTGAAAGAGTTGGATTTGTCAAGGTGCTCCAAGATCTCTGATGCTGGCATCAA ACATATCGCTTCCATTGAAAGCTTGGAGAAGCTACATGTTTCGCAAACCGGGTTGACTGA CAATGGAGTTATGGCCATTTCGTCGCTGATAAACTTACGTTTATTAGATTTGGGGGGAGT TCGTTTCACAGACAAAGCACTACGGTCTTTACAGGTATTGACACAGCTCGAGCACCTTGA TATATGGGGCAGTGAAATTACCAATGAGGGAGCTTCTGTCCTTATTGCATTTACATCTTT GAGCTTCTTGAATATTTCTTGGACACGTGTGACATGCTTACCAATTCTTCCGACCTTGAG GTGTCTAAATATGAGCAACTGCACAATTCATTCTATTTGCAATGGGGAATTCCAAGTTCT TATTCATCTGGAAAAGTTGATTATCTCCGCAGCATCATTTGGCAACATTGATGAAGTTTT TTCAAGCATCCTACCAAGTTCACTGACATACTTGGATATGTCAAGTTGCTCTTCAAGCAA CTTGTATTTCTTGGGAAATATGAGGAATCTAGAGCACTTGGACCTTAGCTACAGCAGAAT AATTAGCGATGCAATTGAATATATTGCAAATATTGGAATGAACCTTAAGTTTTTGAGCCT GAGTAATTCTGAAGTAACTTCTCAAGCACTGTGTGTTCTGGCAGGAACAGTTCCAAGTCT GACAACACTGTCTTTAGCTCATACAAAAATTGATGATTCTGCTTTATTATACATAAGCAT GATGCCTTCACTGAGAATTTTAAACCTGAGTCGCACATGTATCAAAGGTTTCATGATGGA AAACTCTGTGAAAGTACTGTCTCTCTCTGCGCTTGAAGAACTCAAATACCTGGAAAGCCT AAATTTGAATAATACACAGCTGATGGATGATGTTATACCTCCCTTAGCATCCCTTAGAGC ACTGAAATATTTGTTCCTAAAAAGTGATTTCTTGTCTGATCCTGCCTTGCATGCACTGTC TTCTGCCTCAAATTTGATACATCTTGGGTTCTGTGGGAATATATTGTCCACCACTGGGCT TAGAAAGTTTGTTCCCCCTGCCACGCTGCGTATGTTGGATTTAAGCGGCTGTTGGATCTT AACAGGAGATGCAATTTCAGCATTCTGTACGTGTCACCCTGTGATTGAAGTGAGACATGA GCTTATACAGGAACTTCAGGCAAATTATGGTGGTACTTCGCATCTTCACAAGTCCTCTAG ACAACCTCAACAGGTAAAAGCAAAAGTGGCAAAAAGTTCGGCTGGCCCAAGTAGACTTGC TGAAATCTGCTTTGTAGATGAAAGAATAAAGTACAGCAAGGAAGAAATGATGGAGCTTCA ACACCAAGCTAAATCAAATTCTTCAATGCATGTTGCGCAACTTCCACCAGAACTGCGAAG ATCAGTCTGACGACCTGTTAGAAAATATGAATGGAAGAATGTTTTCGGTCAGGTCTTCCA TCCATTCCTGAGGCATTTCCATCTGGTTGATGGCTGAAAACATGGATCTAAACTATTGAT GCTTTGGGATCTGTGGTGCTGTTTGATGTTTGATCATCTTCCACCTTTGTATGAAGTTGG TTCTGGCCCGTTGGCCAAATCAAATGAATTTGCTCTGGTGAAGCGAGGTCCTAGAACATA TTTCTGGATATGTTCATCCTGTTCCTTTTTGGGTTTGAAGACGGTAGCTGATCGAACCAG CAGTTTTTCCAGCAATTTTCTTGGTTACTTTCATCTTGTATTGTTTTACATGTCCGCTTG TCTGTATTTCCTAGGATGTTATATGCAATATAAATCATATCAAAACTCTTTATCTACT