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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os05t0207400-02
CDS Infomation

cds chromosome:IRGSP-1.0:5:6652760:6656383:-1 gene:Os05g0207400 gene_biotype:protein_coding transcript_biotype:protein_coding description:Zinc finger, RING/FYVE/PHD-type domain containing protein. (Os05t0207400-02)
Sequence

ATGGCGGTGATCGCCGCCGCCGGAGGGGAGGGGGACGCGGGCGTCATCGCGCATGTGGTG
GTCGACGTCGACGAGAGTTGTGCGGCGGCGGCGGATGATGATGATCGCAGCCGGCGCCCG
AGCACGGGCTGCAGGATTTGCCACCTCGGCGGCGGCGGCGACGGCGAGATGGCGGCGGAG
AGCGGGAGCGGGCGGCTGGTGAGGCTCGGGTGCGGCTGCCGCGGCGAGCTGGCGGCGGCG
CACCGGCGTTGCGCCGAGGCGTGGTTCTCCGTCAGGGGCAACAGGCGCTGCGAGATCTGC
GGCGAGACGGCGGAGAACATCACCGGCTGGGGCGGCGGAGGCAAGGAGTTCATGAAGCGG
TGGCACGCGACGGCGGGCGTCGACGTCGAAGGCTCCTCCAAGGCATGCAGCGGCTTCTGC
AAGAGCCACTCATTATGCAATCTCTTGATTGCGTGCTTGATCATTGTAATCGTCTTGCCA
TGGTTGCTCCATAATCATGTGCTTTGA

Peptide Sequence

PEP ID

Os05t0207400-02
PEP Infomation

pep chromosome:IRGSP-1.0:5:6652760:6656383:-1 gene:Os05g0207400 transcript:Os05t0207400-02 gene_biotype:protein_coding transcript_biotype:protein_coding description:Zinc finger, RING/FYVE/PHD-type domain containing protein. (Os05t0207400-02)
Sequence

MAVIAAAGGEGDAGVIAHVVVDVDESCAAAADDDDRSRRPSTGCRICHLGGGGDGEMAAE
SGSGRLVRLGCGCRGELAAAHRRCAEAWFSVRGNRRCEICGETAENITGWGGGGKEFMKR
WHATAGVDVEGSSKACSGFCKSHSLCNLLIACLIIVIVLPWLLHNHVL

Transcript Sequence

Transcript ID

Os05t0207400-02
Transcript Infomation

cdna chromosome:IRGSP-1.0:5:6652760:6656383:-1 gene:Os05g0207400 gene_biotype:protein_coding transcript_biotype:protein_coding description:Zinc finger, RING/FYVE/PHD-type domain containing protein. (Os05t0207400-02)
Sequence

AGTTCGCAGCACCGAGGCGATATTCCCCGTCCCCCATCATTTTCTCCCATTTCTTGATTT
CTTGTCATTATTATTATTACTATATTCCCCAACACCTAGATTCCCTTCCCTGGTGGTTGA
TCGATCGATGCGCCCAGCCCACATGGCCGCGTGCCGATCGCCATCATGACATTGCCATGG
CGGTGATCGCCGCCGCCGGAGGGGAGGGGGACGCGGGCGTCATCGCGCATGTGGTGGTCG
ACGTCGACGAGAGTTGTGCGGCGGCGGCGGATGATGATGATCGCAGCCGGCGCCCGAGCA
CGGGCTGCAGGATTTGCCACCTCGGCGGCGGCGGCGACGGCGAGATGGCGGCGGAGAGCG
GGAGCGGGCGGCTGGTGAGGCTCGGGTGCGGCTGCCGCGGCGAGCTGGCGGCGGCGCACC
GGCGTTGCGCCGAGGCGTGGTTCTCCGTCAGGGGCAACAGGCGCTGCGAGATCTGCGGCG
AGACGGCGGAGAACATCACCGGCTGGGGCGGCGGAGGCAAGGAGTTCATGAAGCGGTGGC
ACGCGACGGCGGGCGTCGACGTCGAAGGCTCCTCCAAGGCATGCAGCGGCTTCTGCAAGA
GCCACTCATTATGCAATCTCTTGATTGCGTGCTTGATCATTGTAATCGTCTTGCCATGGT
TGCTCCATAATCATGTGCTTTGAGATCCTCTAAATTGCCATTTTGGATAAATCATTTTCA
GCTATTCAGATGAGATGGCTATTTTAGGGTGTGTTTGGTTCACAGTCATGCATGGATGGG
ACCATATTTTGTTGGATACGACGATCCAATTTTTTATTTGGTTTATATAGATATAGCGAT
CCAATTTCTTGTTTGGTTGAATGAATATAGCATGGATGG