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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os05t0203000-01
CDS Infomation

cds chromosome:IRGSP-1.0:5:6405755:6406491:-1 gene:Os05g0203000 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:RAPID ALKALIZATION FACTOR 21 description:Similar to RALF. (Os05t0203000-01)
Sequence

ATGGCTCGCCTCGGCATCGGCGTGGCGGCGGCGGCTGCGGCGGTGGTGGCGGCCACGCTG
GTGGTCTCCTGCCTGCGCGCGTCGCCTGCCGAGGCCTACAGCGGCGGCGGCCTCGGCTAC
AGCCAGCTGCTCACCACGGCCCACCTCGGCGCCATCTCCTCCTCGTCGTGCGGCGGCAGG
CTGGGGCGGCAGTGCTCAGCGGCGGTGGGGGCCGACGGCGGGCTGCTCCGGCGGGCGCTG
GCGGCGAGGAAGCCGACGAACCGGTACGTCAGCTACTCGGCGCTGGACGCGAACAAGGTG
CCGTGCAACAAGCGAGGCCAGACCTACTACCAGAACTGCGCGTCGCAGCAGGCGGCGAAT
CCCTACCGCCGCGGCTGCTCCGCCATTACCCGCTGCTCCCGCAACATGAACTGA

Peptide Sequence

PEP ID

Os05t0203000-01
PEP Infomation

pep chromosome:IRGSP-1.0:5:6405755:6406491:-1 gene:Os05g0203000 transcript:Os05t0203000-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:RAPID ALKALIZATION FACTOR 21 description:Similar to RALF. (Os05t0203000-01)
Sequence

MARLGIGVAAAAAAVVAATLVVSCLRASPAEAYSGGGLGYSQLLTTAHLGAISSSSCGGR
LGRQCSAAVGADGGLLRRALAARKPTNRYVSYSALDANKVPCNKRGQTYYQNCASQQAAN
PYRRGCSAITRCSRNMN

Transcript Sequence

Transcript ID

Os05t0203000-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:5:6405755:6406491:-1 gene:Os05g0203000 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:RAPID ALKALIZATION FACTOR 21 description:Similar to RALF. (Os05t0203000-01)
Sequence

AAAGAACCCCCTCCCCAAATTGCTCCAAACGCCAACCTCCCCAGCCCCCCACCACCTCGG
AATTCGGCGTGAATCCATCCCATGGCTCGCCTCGGCATCGGCGTGGCGGCGGCGGCTGCG
GCGGTGGTGGCGGCCACGCTGGTGGTCTCCTGCCTGCGCGCGTCGCCTGCCGAGGCCTAC
AGCGGCGGCGGCCTCGGCTACAGCCAGCTGCTCACCACGGCCCACCTCGGCGCCATCTCC
TCCTCGTCGTGCGGCGGCAGGCTGGGGCGGCAGTGCTCAGCGGCGGTGGGGGCCGACGGC
GGGCTGCTCCGGCGGGCGCTGGCGGCGAGGAAGCCGACGAACCGGTACGTCAGCTACTCG
GCGCTGGACGCGAACAAGGTGCCGTGCAACAAGCGAGGCCAGACCTACTACCAGAACTGC
GCGTCGCAGCAGGCGGCGAATCCCTACCGCCGCGGCTGCTCCGCCATTACCCGCTGCTCC
CGCAACATGAACTGACGATGATGATGATGGTGATCACATCATTGTCCATCCAAATTCCCC
AATTCCCAATTCGTCCAATCCATTGATTCGGTCGGTGAATGCATGGATGGATCGATTATA
TATATATATATATATATATATGTGTGTGTGATGCATTATTATTATATATTGGCTAATTAT
TAATCGATTAGTTGTATTTATATGCATGCTGCTGATGATGATGATTATATATTTATATAT
ATGTGATGTGATGATGT