Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os05t0200700-01
CDS Infomation	cds chromosome:IRGSP-1.0:5:6292207:6293478:-1 gene:Os05g0200700 gene_biotype:protein_coding transcript_biotype:protein_coding description:Conserved hypothetical protein. (Os05t0200700-01)
Sequence	ATGGATCTCGCGACGACGCCGGCGCGGCGGCCCATGGAGGCCGGGATGGCGCGGCGGCTG TGGCACGTCGTCCTCGCCGTGTGCCACATGCTCCGGCGAGGCCTCTGCCGGAAGCGCCTC ATGGTGGACCTCCACGTCCTCCTCGGCCGCGGCAAGCTCGCCGGCAAGGCGCTCCGCGGC CTCCTCGCCCACCACGCCGCCGCGGGGCACGGCCACCACCTCGCGGCGTCGTCGTCGTCG TCCGCCGCGCTGGCGTCGTTCTACGGCCGCCGCCCGCGGGAGGTGGAGTTCAGCTGCACC ACCACGCCGTCGTCGTACCCGCACTACGGGCTGTTCCCCTTCAAGAGCCGCGGCGGCGGC GGTGGCCGCCGCGGCGGCGGAGGCGGCGGCGAGTATGGCGGCCTCGACGCGGCGGCGGTG GCGCGGGCGTTCGAGATGATGAGCGCCGAGGTGGAAGGCACGCCGTCGTCGTCGGCGGCG GCGGTGCAGGGCGGCGGCGGCGGCGGCTGGGCCACCGCGACTCCGTCGCCGATGGTGGCG TGGATCCTGGGGCGAAGCCCCGCCGGTGTCCGGCCGCTCCGCGTCACCGACTCGCCGTTC CCCGCCGTGCCGGAGAACGGCGGCGGCGGCGGCGGCGAGCAGCGCGTGGACGACGCCGAG TTCGAGGACTTCATCAACAAGTTCTACGAGCAGCTGCGGATGCAGCCGTCCGCCGCCACG CCGGACTGCCAGCTGCGCCGCCGCGGCAGGTAG

Peptide Sequence

PEP ID	Os05t0200700-01
PEP Infomation	pep chromosome:IRGSP-1.0:5:6292207:6293478:-1 gene:Os05g0200700 transcript:Os05t0200700-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Conserved hypothetical protein. (Os05t0200700-01)
Sequence	MDLATTPARRPMEAGMARRLWHVVLAVCHMLRRGLCRKRLMVDLHVLLGRGKLAGKALRG LLAHHAAAGHGHHLAASSSSSAALASFYGRRPREVEFSCTTTPSSYPHYGLFPFKSRGGG GGRRGGGGGGEYGGLDAAAVARAFEMMSAEVEGTPSSSAAAVQGGGGGGWATATPSPMVA WILGRSPAGVRPLRVTDSPFPAVPENGGGGGGEQRVDDAEFEDFINKFYEQLRMQPSAAT PDCQLRRRGR

Transcript Sequence

Transcript ID	Os05t0200700-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:5:6292207:6293478:-1 gene:Os05g0200700 gene_biotype:protein_coding transcript_biotype:protein_coding description:Conserved hypothetical protein. (Os05t0200700-01)
Sequence	ACTCATTCCATTCCATCAACCCCTTCGCTAGTTTAGCCAATTAAGCTAATCAGCCCCTCG AAACCTCACAAAATTAACAACCAGTCCCTTCTCCGATCCGTTAGCCTTCGTTTTTCTCTT TAGTGTGTGTGTGTTGCGTTTTTGCAAATACACCCCTGAGTATTATTATTATTGGGTAAA ATTGATGGATCTCGCGACGACGCCGGCGCGGCGGCCCATGGAGGCCGGGATGGCGCGGCG GCTGTGGCACGTCGTCCTCGCCGTGTGCCACATGCTCCGGCGAGGCCTCTGCCGGAAGCG CCTCATGGTGGACCTCCACGTCCTCCTCGGCCGCGGCAAGCTCGCCGGCAAGGCGCTCCG CGGCCTCCTCGCCCACCACGCCGCCGCGGGGCACGGCCACCACCTCGCGGCGTCGTCGTC GTCGTCCGCCGCGCTGGCGTCGTTCTACGGCCGCCGCCCGCGGGAGGTGGAGTTCAGCTG CACCACCACGCCGTCGTCGTACCCGCACTACGGGCTGTTCCCCTTCAAGAGCCGCGGCGG CGGCGGTGGCCGCCGCGGCGGCGGAGGCGGCGGCGAGTATGGCGGCCTCGACGCGGCGGC GGTGGCGCGGGCGTTCGAGATGATGAGCGCCGAGGTGGAAGGCACGCCGTCGTCGTCGGC GGCGGCGGTGCAGGGCGGCGGCGGCGGCGGCTGGGCCACCGCGACTCCGTCGCCGATGGT GGCGTGGATCCTGGGGCGAAGCCCCGCCGGTGTCCGGCCGCTCCGCGTCACCGACTCGCC GTTCCCCGCCGTGCCGGAGAACGGCGGCGGCGGCGGCGGCGAGCAGCGCGTGGACGACGC CGAGTTCGAGGACTTCATCAACAAGTTCTACGAGCAGCTGCGGATGCAGCCGTCCGCCGC CACGCCGGACTGCCAGCTGCGCCGCCGCGGCAGGTAGCCGGCCGGCGGCGGCCGTGCTCC CTAGCTAGCTCGATATACCACCGCTGGCGTTGCTGCGGCGGCGCCGTCGCCGGCGCCGCC AAGCTCTAGCATGCGCGCGGCGGCGACGTGGCGTGAGCTTGTACGTTCGATTGTGTTGTT GCATGCATGCATGGGGCGATGGCGATGCGGATGCAGCGGAGGATTCTACATACTTGGCAG CGTATACGAGCGTTCGTACGTACATACGTGCGTACACGAATTAAATTGTTATTATACCAT GATATTGGTGTCTGGCTACATGGGGAGTATTTTTCATGCATTTGTATCAAATTTGAGATC GTTTTCGTCGCC