Gene sequences

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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os05t0200500-02
CDS Infomation	cds chromosome:IRGSP-1.0:5:6273311:6282541:-1 gene:Os05g0200500 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Casein kinase-like protein. (Os05t0200500-02)
Sequence	ATGGACGACGTCGACAGCGTCGTCGGGAGCGGGGACAAGGCCGGCGAGGCGCCGGGCGAC GACGGGAGCTCCACGCCGCTCCCCGAGACGGTCCAAGTTGCCAATTCACCTACTTACAAA CTTGATAGAAAGCTGGGAAAGGGAGGATTTGGGCAAGTATATGTTGGTCGGCGTATTTCC TCTCCTGGTGTTACCGACAGGACACCTGGAGCAAATGCTTTGGAGGTGGCAATAAAATTT GAACATCGAACCAGCAAAGGCTGCAATTATGGAGCTCCCTATGAGTGGCAAGTTTACAAC ACTCTAAGCGGCATTCATGGTGTACCAAGAGTACATTATAAAGGGAGGCAGGGGGATTAC TATATCATGATTATGGACATGTTGGGTCCAAGCCTGTGGGATGTTTGGAATAATAATTCC CACTCAATGTCTGTTGAAATGGTTGCTTGTATTGCTATAGAAGCAATCTCCATATTGGAG AAGATGCATTCGAAAGGGTATGTTCATGGTGATGTAAAACCTGAGAATTTTTTGCTTGGA ACCCCAGGAACCCTGGAAGAGAAAAAACTTTTTCTTGTTGACCTTGGATTAGCTACTAGG TGGAAAGACACTGGTTCGGGGGAGCATGTTGAGTATGATCAGAGGCCTGATATCTTTAGG GGAACTGTTCGCTATGCTAGTGTGCATGCTCACTTAGGAAGAACTGGAAGCAGAAGAGAT GATCTTGAATCCCTTGCCTATACACTTGTTTTTCTTTTACGGGGTCGCCTTCCTTGGCAA GGATACCAGGGAGAGAATAAAGGTTTCCTTGTTTGCAAGAAAAAAATGGCGACCTCTCCA GAATCTTTGTGCTGCTTCTGTCCACAACCTTTCCGGCAATTTATTGAGTATGTAGTGAAC TTAAAGTTTGATGAAGAACCAAACTATGCAAAGTGCATTTCTCTTTTTGATGGCATTGTT GGTCCAAACCCAGACATAAGGCCAATCAACACTGATGGTGCTCAGAAGCTTATATATCAG GTTGGTCAAAAAAGAGGTCGCCTAACGATGGACGAAGATGATGATGAGCAGCCAAAAAAG AAGATTAGAATGGGCATGCCTGCAACTCAATGGATTAGTGTTTATAATGCCAGACGGCCT ATGAAGCAAAGGTATCACTACAATGTTGCAGATGGTCGGTTAGCACAGCATATTACAAAA GGAAATGAAGATGGGTTGTTTATTAGTTCAGTGGCTTCTTGTTCAAATCTGTGGGCTTTA ATAATGGATGCTGGCACTGGATTTACTTCTCAAGTATATGAGCTTTCTCAACATTTTCTT CACAAGGAATGGATAATGGATCAGTGGGAGAGAAACTTCTATATCACTTCATTAGCAGGT GCAAACAATGGCAGTTCTCTGGTGGTCATGTCAAGAGGGACGCAATATGCCCAACAATCC TACAAAGTAAGCGACTCATTTCCCTTCAAGTGGATAAACAAGAAGTGGAAGGAGGGTTTC TATGTCACTGCTATGGCCACTGCAGGAAGCCGGTGGGCAGTGGTCATGTCCCGGAATGCT GGCTTTACAGATCAGGTTGTGGAGCTTGACTTCCTGTATCCAAGTGAGGGAATACATCGG CGTTGGGACAATGGTTTTCGCATAACTGCAACAGCAGCTACATGGGACCAGGCGGCATTT ATCTTGAGCATTCCCAGAAGAAAGCCTGCTGATGAAACACAGGAAACCCTGAGGACATCT GCTTTCCCCAGCCAGCATGTGAAGGAGAAATGGTCGAAGAATCTTTACCTAGCTTCCATT TGCTATGGAAGAACGGTGTCATGA

Peptide Sequence

PEP ID	Os05t0200500-02
PEP Infomation	pep chromosome:IRGSP-1.0:5:6273311:6282541:-1 gene:Os05g0200500 transcript:Os05t0200500-02 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Casein kinase-like protein. (Os05t0200500-02)
Sequence	MDDVDSVVGSGDKAGEAPGDDGSSTPLPETVQVANSPTYKLDRKLGKGGFGQVYVGRRIS SPGVTDRTPGANALEVAIKFEHRTSKGCNYGAPYEWQVYNTLSGIHGVPRVHYKGRQGDY YIMIMDMLGPSLWDVWNNNSHSMSVEMVACIAIEAISILEKMHSKGYVHGDVKPENFLLG TPGTLEEKKLFLVDLGLATRWKDTGSGEHVEYDQRPDIFRGTVRYASVHAHLGRTGSRRD DLESLAYTLVFLLRGRLPWQGYQGENKGFLVCKKKMATSPESLCCFCPQPFRQFIEYVVN LKFDEEPNYAKCISLFDGIVGPNPDIRPINTDGAQKLIYQVGQKRGRLTMDEDDDEQPKK KIRMGMPATQWISVYNARRPMKQRYHYNVADGRLAQHITKGNEDGLFISSVASCSNLWAL IMDAGTGFTSQVYELSQHFLHKEWIMDQWERNFYITSLAGANNGSSLVVMSRGTQYAQQS YKVSDSFPFKWINKKWKEGFYVTAMATAGSRWAVVMSRNAGFTDQVVELDFLYPSEGIHR RWDNGFRITATAATWDQAAFILSIPRRKPADETQETLRTSAFPSQHVKEKWSKNLYLASI CYGRTVS

Transcript Sequence

Transcript ID	Os05t0200500-02
Transcript Infomation	cdna chromosome:IRGSP-1.0:5:6273311:6282541:-1 gene:Os05g0200500 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Casein kinase-like protein. (Os05t0200500-02)
Sequence	GCTTTTCTCTCGCCTTTTATTTCTTCTTCTTCTTCCCTTCTCCGTCGCCGACCACCTCGC CTCCGCCTCGCCGCCGCCGCCGCCTCCGCTCCAAACCCTAGACCAATCCACCCCCACGCC GGGTGGAGGCCCTCGTAGAAGCGGCGGCATCCACGCACACACCACGCCGGCGAGCCCCGG CTCTCGACGCGGCGGTTCCCGGTGACGGAGATTCCGAGCCGCGTTCGTGGGACTGGAGAG CGGGGGGGGGGGGGGGAAGTGGTAATGGACGACGTCGACAGCGTCGTCGGGAGCGGGGAC AAGGCCGGCGAGGCGCCGGGCGACGACGGGAGCTCCACGCCGCTCCCCGAGACGGTCCAA GTTGCCAATTCACCTACTTACAAACTTGATAGAAAGCTGGGAAAGGGAGGATTTGGGCAA GTATATGTTGGTCGGCGTATTTCCTCTCCTGGTGTTACCGACAGGACACCTGGAGCAAAT GCTTTGGAGGTGGCAATAAAATTTGAACATCGAACCAGCAAAGGCTGCAATTATGGAGCT CCCTATGAGTGGCAAGTTTACAACACTCTAAGCGGCATTCATGGTGTACCAAGAGTACAT TATAAAGGGAGGCAGGGGGATTACTATATCATGATTATGGACATGTTGGGTCCAAGCCTG TGGGATGTTTGGAATAATAATTCCCACTCAATGTCTGTTGAAATGGTTGCTTGTATTGCT ATAGAAGCAATCTCCATATTGGAGAAGATGCATTCGAAAGGGTATGTTCATGGTGATGTA AAACCTGAGAATTTTTTGCTTGGAACCCCAGGAACCCTGGAAGAGAAAAAACTTTTTCTT GTTGACCTTGGATTAGCTACTAGGTGGAAAGACACTGGTTCGGGGGAGCATGTTGAGTAT GATCAGAGGCCTGATATCTTTAGGGGAACTGTTCGCTATGCTAGTGTGCATGCTCACTTA GGAAGAACTGGAAGCAGAAGAGATGATCTTGAATCCCTTGCCTATACACTTGTTTTTCTT TTACGGGGTCGCCTTCCTTGGCAAGGATACCAGGGAGAGAATAAAGGTTTCCTTGTTTGC AAGAAAAAAATGGCGACCTCTCCAGAATCTTTGTGCTGCTTCTGTCCACAACCTTTCCGG CAATTTATTGAGTATGTAGTGAACTTAAAGTTTGATGAAGAACCAAACTATGCAAAGTGC ATTTCTCTTTTTGATGGCATTGTTGGTCCAAACCCAGACATAAGGCCAATCAACACTGAT GGTGCTCAGAAGCTTATATATCAGGTTGGTCAAAAAAGAGGTCGCCTAACGATGGACGAA GATGATGATGAGCAGCCAAAAAAGAAGATTAGAATGGGCATGCCTGCAACTCAATGGATT AGTGTTTATAATGCCAGACGGCCTATGAAGCAAAGGTATCACTACAATGTTGCAGATGGT CGGTTAGCACAGCATATTACAAAAGGAAATGAAGATGGGTTGTTTATTAGTTCAGTGGCT TCTTGTTCAAATCTGTGGGCTTTAATAATGGATGCTGGCACTGGATTTACTTCTCAAGTA TATGAGCTTTCTCAACATTTTCTTCACAAGGAATGGATAATGGATCAGTGGGAGAGAAAC TTCTATATCACTTCATTAGCAGGTGCAAACAATGGCAGTTCTCTGGTGGTCATGTCAAGA GGGACGCAATATGCCCAACAATCCTACAAAGTAAGCGACTCATTTCCCTTCAAGTGGATA AACAAGAAGTGGAAGGAGGGTTTCTATGTCACTGCTATGGCCACTGCAGGAAGCCGGTGG GCAGTGGTCATGTCCCGGAATGCTGGCTTTACAGATCAGGTTGTGGAGCTTGACTTCCTG TATCCAAGTGAGGGAATACATCGGCGTTGGGACAATGGTTTTCGCATAACTGCAACAGCA GCTACATGGGACCAGGCGGCATTTATCTTGAGCATTCCCAGAAGAAAGCCTGCTGATGAA ACACAGGAAACCCTGAGGACATCTGCTTTCCCCAGCCAGCATGTGAAGGAGAAATGGTCG AAGAATCTTTACCTAGCTTCCATTTGCTATGGAAGAACGGTGTCATGAGGTCCACATTCT GTTTGGCTGCTTCTTTGTAGAGTTTATTCATATCAACCGCTGGAGATATGATTTAGAATG CGAATTTTGAAGGGCAATGATATTTTTAATTGCTTACCTATAGTTAACTGAATTGATAGA TGGCCAAGCCTCCTGCGTGTGTTCTGTATAGGTGCCCCAGCCTGGAAGTTGCATAATGTA TACTGTGCTGTCCTGTTGTTGTACCCCCTTGTCCATAGATTGCTAAAGTCGCCATGTTGT AAGTTAGCGAGTTGTACCATGTTTAGAAGTCGTGCATATAGTTTAAATTTATATTTAACC TGGAGGTAGGCGACAAAATTGTACAAAGCTAACTCGAGTCTGCGGTCCTGTTATTTCTCT GTTTTGGCTTTTTCGTGTTTGTGAACCCCCTATAGTGCTTAGAGTTTGGAGTTCTTTTTT TCTTTTTGAGCTCCAAAGTTCGGAGTTCTCATCTGTAAATTAAATCTGCAATGCATGCAT CTAGTGACTGGTGAATCTATTATCATTCACTCTTGCAGTCCATCACTTATGTGTAATTCT GTTTGGTTAATTTCAGATTGCATGAAGCTAAGCACAGTACATTTCGTCAC