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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os05t0200280-01
CDS Infomation

cds chromosome:IRGSP-1.0:5:6255334:6257922:-1 gene:Os05g0200280 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to prenylated rab acceptor family protein. (Os05t0200280-01)
Sequence

ATGTCGAAGTATGGCACCATCCCGACCTCCTCGTCCTCGGACGGGCCGCCCCCGGGCTCC
TCCTCCTCCTCCCCGCTCGACTTCATCTCCCGCGCCAAGGCGCGCGGCGCGACGGCGCTG
GCGGAGCGGCGGCCGTGGCGGGAGCTCGCCGACCCGCGGGCGGCGTCCGTGCCGCGCGGG
CTCGGCGGCGCGTACCGCCGCGCGCGCGCCAACCTGGGCCACTTCTCCATGAACTACGCC
ATCGTGGTGCTCGCCGTGGTGTTCCTCTCCCTGCTCTGGCACCCGGTCTCCCTCATCGTC
TTCCTCGCCTGCATGGTCGCCTGGCTCTTCCTCTACTTCCTCCGCGACGAGCCGCTCGCG
CTCTGCGGCCGCGCCGTCGGGGAGGGCGCCGTTCTCGCGGTGCTCTCCGTGCTCACCCTC
GTCCTCCTCCTCCTCACCGGCGCCACCGTCAACATCCTCACCTCGCTGCTCGTCGGCGTC
GTCATCGTCCTCCTCCACGCCGTCTTCCACCGCCCCGCCGACAGCATCGACGAGGAGGCC
GGCCGGTATTACACCCCCGTCCCGCCGCAGCCGTCCTACTAG

Peptide Sequence

PEP ID

Os05t0200280-01
PEP Infomation

pep chromosome:IRGSP-1.0:5:6255334:6257922:-1 gene:Os05g0200280 transcript:Os05t0200280-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to prenylated rab acceptor family protein. (Os05t0200280-01)
Sequence

MSKYGTIPTSSSSDGPPPGSSSSSPLDFISRAKARGATALAERRPWRELADPRAASVPRG
LGGAYRRARANLGHFSMNYAIVVLAVVFLSLLWHPVSLIVFLACMVAWLFLYFLRDEPLA
LCGRAVGEGAVLAVLSVLTLVLLLLTGATVNILTSLLVGVVIVLLHAVFHRPADSIDEEA
GRYYTPVPPQPSY

Transcript Sequence

Transcript ID

Os05t0200280-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:5:6255334:6257922:-1 gene:Os05g0200280 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to prenylated rab acceptor family protein. (Os05t0200280-01)
Sequence

AGAGTCAAGACTCCCTCCCTCTCCTCCACGTCAAGTCCACTTCGCCTCCCTCGCCGCGTC
TCGCCGGCGCCGGCCACCGTCCGCCGCCTCCGCCTCCGCGCCATGTCGAAGTATGGCACC
ATCCCGACCTCCTCGTCCTCGGACGGGCCGCCCCCGGGCTCCTCCTCCTCCTCCCCGCTC
GACTTCATCTCCCGCGCCAAGGCGCGCGGCGCGACGGCGCTGGCGGAGCGGCGGCCGTGG
CGGGAGCTCGCCGACCCGCGGGCGGCGTCCGTGCCGCGCGGGCTCGGCGGCGCGTACCGC
CGCGCGCGCGCCAACCTGGGCCACTTCTCCATGAACTACGCCATCGTGGTGCTCGCCGTG
GTGTTCCTCTCCCTGCTCTGGCACCCGGTCTCCCTCATCGTCTTCCTCGCCTGCATGGTC
GCCTGGCTCTTCCTCTACTTCCTCCGCGACGAGCCGCTCGCGCTCTGCGGCCGCGCCGTC
GGGGAGGGCGCCGTTCTCGCGGTGCTCTCCGTGCTCACCCTCGTCCTCCTCCTCCTCACC
GGCGCCACCGTCAACATCCTCACCTCGCTGCTCGTCGGCGTCGTCATCGTCCTCCTCCAC
GCCGTCTTCCACCGCCCCGCCGACAGCATCGACGAGGAGGCCGGCCGGTATTACACCCCC
GTCCCGCCGCAGCCGTCCTACTAGTATGACTCAACGATGGATGGCACGTGTATCACACAC
ATTAGTGTAAATATCGTTTAAGCAAATAATCCTGGAGATCTGGAGTTGTCGCAGAAGTTC
CTGATTCTAGTCTGAAGAGTGGACAGCGTTCGGATGGATTCGTGTGGTCAGTTTGTGAAC
CAAACCTGTATAAATTCAGCCGATTGTGAAGAAAGCACTGTGGATTCTCCGTTTCTTAGA
TTCTGTTCTCTATGCTGCTTTCTCCTCAGGGTCTATTGACTATGTAAAATTCTGTACCCT
GCTGGAGTGCCACATCTCGGAAAACTGTATCTTGTATTTTTCCCATTTTGCCTGTGTCTG
TGGTGGTGACGGTGGTTGAAAATATTGCATTTCTAGAGGTGAAATAAATCTTGCTGCAGT
TTAATACTGTGGTTTTAGGCGTCC