Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os05t0199500-02
CDS Infomation	cds chromosome:IRGSP-1.0:5:6191386:6196093:-1 gene:Os05g0199500 gene_biotype:protein_coding transcript_biotype:protein_coding description:Glycosyl transferase, family 31 protein. (Os05t0199500-01);Glycosyl transferase, family 31 protein. (Os05t0199500-02)
Sequence	ATGCCGCTCCACCACCACCGCCACCACCACCACTCCGCCGCCGTCGCCGTCGCCGTAGCC GACGACGACGACGAGGCCAAGCCGCGCCGCCCCTACTCCACCTTCGCCTCCCCGCGCGCG CCCACCTCCGCCTTCTCCGCCGCCTTCTCAACCCACCGCCTCCTCGTCCTCTTCTCCGTC GCCTGCCTCCTCGTCGCCGCGGCCTCCCTCGCCTTCGCCTTCTCCGCCCGCGCCGCGACC CTGCAGCCGCCGCCCCTCGCCGCCGTGGCCGAAGCCACCGCCAAGGTCGCCTTCCGCTGC GGCCGCGCCGAGGACACCCTCCGCGCCTTCCTCGCCTCCTCCTCGGGGAACTACTCCTCC GCGGCGGAGGGGAGGGAGAGGGAGAAGGTGCTCGCCGTCGTCGGGGTGCACACGGAGATC GGATCCGCCGCCCGCCGCGCCGCGCTCCGGGCCACCTGGTTCCCGCCCAAGCCCGAAGGC ATCGTAAGTTTGGAACATGGAACTGGTTTATCTTTTAGGTTTGTTGTTGGACGAACCAAA GATAAAGAAAAAATGGCAGATCTTCAGAAAGAGGTAGACATGTATCATGATTTCTTGTTT GTTGATGCTGAAGAAGATACAAAGCCCCCACAGAAAATGTTAGCGTTTTTCAAAGCAGCT TATGACATGTTCGACGCAGATTTCTATGTCAAAGCTGATGATGCTATCTATCTGCGCCCA GATAGACTCGCTGCTCTTCTTGCAAAGGACAGGCTTCATCAGCGGACATACATTGGTTGC ATGAAAAAGGGTCCAGTTGTCAATGACCCAAATATGAAGTGGTATGAAAGTTCGTGGGAA TTATTAGGCAATGAGTACTTCAGTCATGCATCTGGTTTACTATATGCTCTTTCTTCGGAG GTGGTTGGATCTCTAGCTGCTACAAATAATGATAGTTTAAGGATGTTTGATTACGAAGAT GTTACTATTGGATCATGGATGCTTGCCATGAATGTAAAGCATGAAGACAACCGTGCAATG TGCGATTCGGCATGCACTCCCACCTCCATTGCTGTATGGGACAGCAAGAAATGTTCAAAT TCATGTAACACAACTGAGATAGTAAAGGCGCTTCACAACACTACCTTGTGCTCAAAGAGC CCTACATTGCCACCTGAGGTGGAGGATGAGTAG

Peptide Sequence

PEP ID	Os05t0199500-02
PEP Infomation	pep chromosome:IRGSP-1.0:5:6191386:6196093:-1 gene:Os05g0199500 transcript:Os05t0199500-02 gene_biotype:protein_coding transcript_biotype:protein_coding description:Glycosyl transferase, family 31 protein. (Os05t0199500-01);Glycosyl transferase, family 31 protein. (Os05t0199500-02)
Sequence	MPLHHHRHHHHSAAVAVAVADDDDEAKPRRPYSTFASPRAPTSAFSAAFSTHRLLVLFSV ACLLVAAASLAFAFSARAATLQPPPLAAVAEATAKVAFRCGRAEDTLRAFLASSSGNYSS AAEGREREKVLAVVGVHTEIGSAARRAALRATWFPPKPEGIVSLEHGTGLSFRFVVGRTK DKEKMADLQKEVDMYHDFLFVDAEEDTKPPQKMLAFFKAAYDMFDADFYVKADDAIYLRP DRLAALLAKDRLHQRTYIGCMKKGPVVNDPNMKWYESSWELLGNEYFSHASGLLYALSSE VVGSLAATNNDSLRMFDYEDVTIGSWMLAMNVKHEDNRAMCDSACTPTSIAVWDSKKCSN SCNTTEIVKALHNTTLCSKSPTLPPEVEDE

Transcript Sequence

Transcript ID	Os05t0199500-02
Transcript Infomation	cdna chromosome:IRGSP-1.0:5:6191386:6196093:-1 gene:Os05g0199500 gene_biotype:protein_coding transcript_biotype:protein_coding description:Glycosyl transferase, family 31 protein. (Os05t0199500-01);Glycosyl transferase, family 31 protein. (Os05t0199500-02)
Sequence	AGCAGCTGTCTGAAGCTTAACCAAAGCTTAAACCCAAAGCAAACCAGAGGCAGATCAGAT CAGAGCTAGTAGCAGCAAGCTCGCGATCTCCCCCACCTTCTAGAACCTTCTAGAACCGCC GAATGCCGCTCCACCACCACCGCCACCACCACCACTCCGCCGCCGTCGCCGTCGCCGTAG CCGACGACGACGACGAGGCCAAGCCGCGCCGCCCCTACTCCACCTTCGCCTCCCCGCGCG CGCCCACCTCCGCCTTCTCCGCCGCCTTCTCAACCCACCGCCTCCTCGTCCTCTTCTCCG TCGCCTGCCTCCTCGTCGCCGCGGCCTCCCTCGCCTTCGCCTTCTCCGCCCGCGCCGCGA CCCTGCAGCCGCCGCCCCTCGCCGCCGTGGCCGAAGCCACCGCCAAGGTCGCCTTCCGCT GCGGCCGCGCCGAGGACACCCTCCGCGCCTTCCTCGCCTCCTCCTCGGGGAACTACTCCT CCGCGGCGGAGGGGAGGGAGAGGGAGAAGGTGCTCGCCGTCGTCGGGGTGCACACGGAGA TCGGATCCGCCGCCCGCCGCGCCGCGCTCCGGGCCACCTGGTTCCCGCCCAAGCCCGAAG GCATCGTAAGTTTGGAACATGGAACTGGTTTATCTTTTAGGTTTGTTGTTGGACGAACCA AAGATAAAGAAAAAATGGCAGATCTTCAGAAAGAGGTAGACATGTATCATGATTTCTTGT TTGTTGATGCTGAAGAAGATACAAAGCCCCCACAGAAAATGTTAGCGTTTTTCAAAGCAG CTTATGACATGTTCGACGCAGATTTCTATGTCAAAGCTGATGATGCTATCTATCTGCGCC CAGATAGACTCGCTGCTCTTCTTGCAAAGGACAGGCTTCATCAGCGGACATACATTGGTT GCATGAAAAAGGGTCCAGTTGTCAATGACCCAAATATGAAGTGGTATGAAAGTTCGTGGG AATTATTAGGCAATGAGTACTTCAGTCATGCATCTGGTTTACTATATGCTCTTTCTTCGG AGGTGGTTGGATCTCTAGCTGCTACAAATAATGATAGTTTAAGGATGTTTGATTACGAAG ATGTTACTATTGGATCATGGATGCTTGCCATGAATGTAAAGCATGAAGACAACCGTGCAA TGTGCGATTCGGCATGCACTCCCACCTCCATTGCTGTATGGGACAGCAAGAAATGTTCAA ATTCATGTAACACAACTGAGATAGTAAAGGCGCTTCACAACACTACCTTGTGCTCAAAGA GCCCTACATTGCCACCTGAGGTGGAGGATGAGTAGAACCTTAGTGTTATTTTTTTTCCCG TCAACAGATGCCAGGTATTGCCTGTCGTAACATCTGATTTCTAGTTAAATGTATTTCCAT ACCGTTGTATTCATTGGTGAACTCATCTGAGAGCCATACTGTTGCAGCTTCTTGTTGCTG AGAGTTCTCCGAGAAGTGTACCATCGCGAGAATGATGTAGGATTTGTGTGCACACTCCCG ATATTGGGATAAGCGAACAAGACAATATGTAGGTTCAGGCAAAATGTATACTCCCGACTG ATAGAAGTGGGAACATTTGTTGTCTTATGTGCCATAGCCGATTCTGGCCATCGATTCTTT C