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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os05t0198700-01
CDS Infomation

cds chromosome:IRGSP-1.0:5:6135077:6136663:1 gene:Os05g0198700 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to REX1 DNA Repair family protein. (Os05t0198700-01)
Sequence

ATGGTGGCATTCTGTTCTCCAAAGAGCAGAAACATGGTTAATGCAATAAAGGGGTTGTTC
ATCTCCTGCGATGTACCGATGGCACAGTTCATTGTTAATCTGAATGCTTCAATGCCCGCT
TCGGACAAGTTCATCCTGCACATGCTTGACCCTACACACATGTTTGTGCAGCCTCATGTG
GCGGAGATGATCAGAGGTAAGATATCAGAGTTCAGAGACCAAAACAGCTACGAGAAGCCA
ACATGA

Peptide Sequence

PEP ID

Os05t0198700-01
PEP Infomation

pep chromosome:IRGSP-1.0:5:6135077:6136663:1 gene:Os05g0198700 transcript:Os05t0198700-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to REX1 DNA Repair family protein. (Os05t0198700-01)
Sequence

MVAFCSPKSRNMVNAIKGLFISCDVPMAQFIVNLNASMPASDKFILHMLDPTHMFVQPHV
AEMIRGKISEFRDQNSYEKPT

Transcript Sequence

Transcript ID

Os05t0198700-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:5:6135077:6136663:1 gene:Os05g0198700 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to REX1 DNA Repair family protein. (Os05t0198700-01)
Sequence

GTTTCTTTCCCGTTCCCCTTCTCGCGAGACCGAAGCCCTGCAGGCGATTTGCGCCGCCGG
GCCGACGCCGCCGTCGCGCGCCGCCCGTGCTCAAGCCGCATCGCCCCGCCGCCGGTCCGG
CCCAGCACCGCGTCGCCCGGCACCGGGGCTTCTCCGACGGCGGCGCGCGCCGCATCGCCT
CGCCGCCCCGCCCGTCCAGCTAGCACCACGTCGCGCGGCAGCCGTCACAGCCTACTGTAC
CGCAAGCTCAACATACTACTGCAAGTCTTGACACTTGTGAGCATTCTCCTCCGCTCCTTG
CGCCGCCGGGACGAGTCGTGGCCGGCGATCTCCATCGGGCGAGCAGAGCAGGGGAGAGGA
TCATGGTGGCATTCTGTTCTCCAAAGAGCAGAAACATGGTTAATGCAATAAAGGGGTTGT
TCATCTCCTGCGATGTACCGATGGCACAGTTCATTGTTAATCTGAATGCTTCAATGCCCG
CTTCGGACAAGTTCATCCTGCACATGCTTGACCCTACACACATGTTTGTGCAGCCTCATG
TGGCGGAGATGATCAGAGGTAAGATATCAGAGTTCAGAGACCAAAACAGCTACGAGAAGC
CAACATGAAAGATCATTCTACCCCACAGTAAGATATCCTGTGTGTACACCACTGAAAAGA
TACCAACGCTTGTCTATGGTTTATAATCGTGTGTGATGTGAGCTTCATGTGCCACTCATC
AATCATGATGATGTTCAAGAATGATAAACTTGCAGTATCAGAAAATGTTGTGGCTTATGA
CTTAATGTGTTTTC