Gene sequences

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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os05t0196200-01
CDS Infomation	cds chromosome:IRGSP-1.0:5:5914193:5916931:-1 gene:Os05g0196200 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Pollen-specific protein SF21. (Os05t0196200-01)
Sequence	ATGGGGGACTCGAGCGGGTCGGGTTCGGGTTCCGGGTCTGTGTCGGTGGACGTCGAGCGG ATTTCCTTCGGCGGCAAGGAGCATCAAGTGAGGACGAGATGCGGTTCATTATCCGTCGCG ATATACGGAGACGAGGACAAGCCGGCGCTCATCACGTACCCGGACATCGCGTTGAACCAC ATGTCCTGCTTCCAAGGATTGCTGTTTTGCCCCGAGGTGGCGTCGCTGCTGCTCCACAAT TTCTGCATATACCACATAAATCCTCAGGGGCACGAGCTAGGAGCGGCTCCAATTCCATCC GATGTGCCGGTGCCATCTGTAGAGGATCTCGCCGATCAGGTTGCGGATGTGCTCGATTTC TTCGGATTAGGATCTGTGATGTGCCTGGGTGTTACAGCTGGTGCCTATGTCCTCACTCTG TTTGCAACGAAATACCGGGAGAGGGTAATAGGCTTGATGTTGGTTTCCCCTCTATGCAGA GCCCCATCATGGAGTGAATGGTTGTATAATAAGGTATTATTAAATTTGATCTACTATTAC GGGACTCGAGGCTTGGTCAAGGAATGCTTGCTTCAGCGGTACTTCAGCAAGAAAGTGTGT GGCAGTGGTCACTATCTTGAATCAGACATTGTACAAGCTTGTAGAAATTTGCTTGATGAG AGGCAGGGTGAAAATATCTGGCGGTTTCTTCACTCGATAAATGAGAGGCATGACTTAACA GATGCATTGAGGAAGCTGCAGTGTCGAACACTGATTTTCGTAGGAGAAAACTCGCAATTC CATGAGGATGCCATCCACATGACCACAAAGTTGGACAAGAGATATTGTGCTCTAGTTGAG GTTCAGGGTTGTGGCTCCCTTGTAACCGAGGAGCAGCCACATGCTATGCTGATGCCGATG GAGTACTTCCTCATGGGATACGGGCTTTACAGACCGTACCAGATGAACAGCAGCCCTCGC AGTCCGCTAAGTCCATGTTGTATATCACCGGAGTTGCTATCTCCTGAGAGCATGGGAGTG AAGCTGAAGCCGATCAAGACTCGAATAGCCGTGGATTACTAA

Peptide Sequence

PEP ID	Os05t0196200-01
PEP Infomation	pep chromosome:IRGSP-1.0:5:5914193:5916931:-1 gene:Os05g0196200 transcript:Os05t0196200-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Pollen-specific protein SF21. (Os05t0196200-01)
Sequence	MGDSSGSGSGSGSVSVDVERISFGGKEHQVRTRCGSLSVAIYGDEDKPALITYPDIALNH MSCFQGLLFCPEVASLLLHNFCIYHINPQGHELGAAPIPSDVPVPSVEDLADQVADVLDF FGLGSVMCLGVTAGAYVLTLFATKYRERVIGLMLVSPLCRAPSWSEWLYNKVLLNLIYYY GTRGLVKECLLQRYFSKKVCGSGHYLESDIVQACRNLLDERQGENIWRFLHSINERHDLT DALRKLQCRTLIFVGENSQFHEDAIHMTTKLDKRYCALVEVQGCGSLVTEEQPHAMLMPM EYFLMGYGLYRPYQMNSSPRSPLSPCCISPELLSPESMGVKLKPIKTRIAVDY

Transcript Sequence

Transcript ID	Os05t0196200-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:5:5914193:5916931:-1 gene:Os05g0196200 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Pollen-specific protein SF21. (Os05t0196200-01)
Sequence	GCCCAGCCACAGCCAGCCGAAGCAGCCGAAGAGAAGAGGGAAGGAGGGAGGGAGGGAGGC AATGGGGGACTCGAGCGGGTCGGGTTCGGGTTCCGGGTCTGTGTCGGTGGACGTCGAGCG GATTTCCTTCGGCGGCAAGGAGCATCAAGTGAGGACGAGATGCGGTTCATTATCCGTCGC GATATACGGAGACGAGGACAAGCCGGCGCTCATCACGTACCCGGACATCGCGTTGAACCA CATGTCCTGCTTCCAAGGATTGCTGTTTTGCCCCGAGGTGGCGTCGCTGCTGCTCCACAA TTTCTGCATATACCACATAAATCCTCAGGGGCACGAGCTAGGAGCGGCTCCAATTCCATC CGATGTGCCGGTGCCATCTGTAGAGGATCTCGCCGATCAGGTTGCGGATGTGCTCGATTT CTTCGGATTAGGATCTGTGATGTGCCTGGGTGTTACAGCTGGTGCCTATGTCCTCACTCT GTTTGCAACGAAATACCGGGAGAGGGTAATAGGCTTGATGTTGGTTTCCCCTCTATGCAG AGCCCCATCATGGAGTGAATGGTTGTATAATAAGGTATTATTAAATTTGATCTACTATTA CGGGACTCGAGGCTTGGTCAAGGAATGCTTGCTTCAGCGGTACTTCAGCAAGAAAGTGTG TGGCAGTGGTCACTATCTTGAATCAGACATTGTACAAGCTTGTAGAAATTTGCTTGATGA GAGGCAGGGTGAAAATATCTGGCGGTTTCTTCACTCGATAAATGAGAGGCATGACTTAAC AGATGCATTGAGGAAGCTGCAGTGTCGAACACTGATTTTCGTAGGAGAAAACTCGCAATT CCATGAGGATGCCATCCACATGACCACAAAGTTGGACAAGAGATATTGTGCTCTAGTTGA GGTTCAGGGTTGTGGCTCCCTTGTAACCGAGGAGCAGCCACATGCTATGCTGATGCCGAT GGAGTACTTCCTCATGGGATACGGGCTTTACAGACCGTACCAGATGAACAGCAGCCCTCG CAGTCCGCTAAGTCCATGTTGTATATCACCGGAGTTGCTATCTCCTGAGAGCATGGGAGT GAAGCTGAAGCCGATCAAGACTCGAATAGCCGTGGATTACTAACGCAGGCAAGATTTCAG CAATCAGAATGAACTGCTTTGCTTACAGCTCAGAGAACTGAAGATAGTCCTGGGCTGGTT GAAATGTTACCGTAGAGACGCAAAGTTTGTTCATGTGTTTGAGTATGTACCCTGGCAAAA AAAGCCTCCTTTTGTTGTATATATAGCCTTATAATCAGGAAAGTTCTACATCAGTAAGAC AG