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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os05t0189300-01
CDS Infomation

cds chromosome:IRGSP-1.0:5:5472720:5474678:-1 gene:Os05g0189300 gene_biotype:protein_coding transcript_biotype:protein_coding description:Vegetative storage protein/acid phosphatase domain containing protein. (Os05t0189300-01)
Sequence

ATGCGCCGGCCAATAATGGCGACGACGACGGCGAGGTTGCTCCTCCTGCTCACGGTGGCG
GGCTTCTGCCTCTGCCACACCACCTGCCAGGAGGCGGCGCCGCCGCCGCCGCCGTACTGC
GGCAGCCTGAGGACGGCCGTGGAGGCGCGGAACATCATCGGGTGGAAGACGGTGCCGCCG
CCGTGCGCCAAGTACGTCGCCGACTACATCACCGGCGAGCGGTACGGCCGCGACGCCGAC
GTGGTGATCAACGAGGCCATCGCCTACGCCGAGAGCCTCAAGCTCTCCGGCACCGGCAAG
GAGATCTGGGTGTTCGACGTCGACGACACCGCCCTCTCCACCGTGCCCTACCAAGCCAAC
CATGGCTACGGAGTTCAACCGTTCGACAACCAGAGCTTCCTCAAGTACGTGGTGCAGGGA
AGCGCGCCAGCACTGCAGAGTACACTGCGGCTTTACCGACGGTTACTCCAGCTTGGTATA
AAGCCGGTGTTCCTGACAGACCGCACCGAGGACCAGAGGACGGTCACAACCAACAACCTT
ATTAAGCAGGGCTACTGCAATTGGGAGAAGCTTGTGCTGCAGCCGGTTAGGCTTCAGACC
TCGACGTTGGCGTTCAAGACCTGCGAACGACAGAAGCTGGTGAATGATGGCTACATCATC
GTCGGCAACATTGGCGACCAGTGGAACGACATCCGCCGCTCGCCGGATGGTTGCCGCACC
TTTAAGTTCCCCAACCCCATGTACTATGTCGACTAG

Peptide Sequence

PEP ID

Os05t0189300-01
PEP Infomation

pep chromosome:IRGSP-1.0:5:5472720:5474678:-1 gene:Os05g0189300 transcript:Os05t0189300-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Vegetative storage protein/acid phosphatase domain containing protein. (Os05t0189300-01)
Sequence

MRRPIMATTTARLLLLLTVAGFCLCHTTCQEAAPPPPPYCGSLRTAVEARNIIGWKTVPP
PCAKYVADYITGERYGRDADVVINEAIAYAESLKLSGTGKEIWVFDVDDTALSTVPYQAN
HGYGVQPFDNQSFLKYVVQGSAPALQSTLRLYRRLLQLGIKPVFLTDRTEDQRTVTTNNL
IKQGYCNWEKLVLQPVRLQTSTLAFKTCERQKLVNDGYIIVGNIGDQWNDIRRSPDGCRT
FKFPNPMYYVD

Transcript Sequence

Transcript ID

Os05t0189300-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:5:5472720:5474678:-1 gene:Os05g0189300 gene_biotype:protein_coding transcript_biotype:protein_coding description:Vegetative storage protein/acid phosphatase domain containing protein. (Os05t0189300-01)
Sequence

AGCTCACACACAACCTCTTCAATACTCTCACTGCAATTTCTGGAGCTCACACTGCATGCG
CCGGCCAATAATGGCGACGACGACGGCGAGGTTGCTCCTCCTGCTCACGGTGGCGGGCTT
CTGCCTCTGCCACACCACCTGCCAGGAGGCGGCGCCGCCGCCGCCGCCGTACTGCGGCAG
CCTGAGGACGGCCGTGGAGGCGCGGAACATCATCGGGTGGAAGACGGTGCCGCCGCCGTG
CGCCAAGTACGTCGCCGACTACATCACCGGCGAGCGGTACGGCCGCGACGCCGACGTGGT
GATCAACGAGGCCATCGCCTACGCCGAGAGCCTCAAGCTCTCCGGCACCGGCAAGGAGAT
CTGGGTGTTCGACGTCGACGACACCGCCCTCTCCACCGTGCCCTACCAAGCCAACCATGG
CTACGGAGTTCAACCGTTCGACAACCAGAGCTTCCTCAAGTACGTGGTGCAGGGAAGCGC
GCCAGCACTGCAGAGTACACTGCGGCTTTACCGACGGTTACTCCAGCTTGGTATAAAGCC
GGTGTTCCTGACAGACCGCACCGAGGACCAGAGGACGGTCACAACCAACAACCTTATTAA
GCAGGGCTACTGCAATTGGGAGAAGCTTGTGCTGCAGCCGGTTAGGCTTCAGACCTCGAC
GTTGGCGTTCAAGACCTGCGAACGACAGAAGCTGGTGAATGATGGCTACATCATCGTCGG
CAACATTGGCGACCAGTGGAACGACATCCGCCGCTCGCCGGATGGTTGCCGCACCTTTAA
GTTCCCCAACCCCATGTACTATGTCGACTAGCTAGCTAGCTATCCATGGATATATACCTT
GTTTGTGTCTGTTTCATCTACTCGTTTTTTGTCATGAATTTGCATCTAGTAATTAATCTT
TGACGCGTGCATATGTTTGATATGTTTGTTAATTTTTCGTGAGATGAAAATTGAATTTGT
AATAACGCTTGTTTGGCAGTTGGCCATTGATTGGTCAATGTACTGTGTTGAGCAAGCTTG
TTGTATTTTTACAGAATTAATAATGGAACTGATGGGCC