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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os05t0188300-01
CDS Infomation

cds chromosome:IRGSP-1.0:5:5419379:5419987:1 gene:Os05g0188300 gene_biotype:protein_coding transcript_biotype:protein_coding description:Uncharacterised protein family UPF0546 domain containing protein. (Os05t0188300-01)
Sequence

ATGGCCATCGGCGGCGACGCGGCGAGCATGGTGGCCGTCGGCCTCGTGTGGGGCACCACC
AACGCCCTGATGCGCCGGGGCGCGCTTGTCTGGGACCACCGCCTGCGCTCCCTTCCCGCC
ACCTCCTCCTCCGTCACCGGCGTGCTGCGGCGGTGGGCGGAGCTCCTCCTGACGTGGCAG
TACTCGGCGCCGTTCGCCGTCAACCTCGCGGCATCCGCCGCCTTCTTCAGCCTCCTTGGC
GCCGCCCCGATCTCCGTTGCCGTGCCCGTCACGAACGCCACCACCTTCGCCGCCACCGCT
GTCGCCGCCGCCCTCCTCGGCGAGGGCACGCGCGCAGCGCCCGCAGCGCTCGGCACGGCG
CTCATCGTCCTCGGCGTCTGGGTCTGCATCTCCTAG

Peptide Sequence

PEP ID

Os05t0188300-01
PEP Infomation

pep chromosome:IRGSP-1.0:5:5419379:5419987:1 gene:Os05g0188300 transcript:Os05t0188300-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Uncharacterised protein family UPF0546 domain containing protein. (Os05t0188300-01)
Sequence

MAIGGDAASMVAVGLVWGTTNALMRRGALVWDHRLRSLPATSSSVTGVLRRWAELLLTWQ
YSAPFAVNLAASAAFFSLLGAAPISVAVPVTNATTFAATAVAAALLGEGTRAAPAALGTA
LIVLGVWVCIS

Transcript Sequence

Transcript ID

Os05t0188300-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:5:5419379:5419987:1 gene:Os05g0188300 gene_biotype:protein_coding transcript_biotype:protein_coding description:Uncharacterised protein family UPF0546 domain containing protein. (Os05t0188300-01)
Sequence

AGTCCACTCGCGGCCCCCCCCAAGATCCACCCGCGCAAGTCACAGATCGCGCCGGCCATG
GCCATCGGCGGCGACGCGGCGAGCATGGTGGCCGTCGGCCTCGTGTGGGGCACCACCAAC
GCCCTGATGCGCCGGGGCGCGCTTGTCTGGGACCACCGCCTGCGCTCCCTTCCCGCCACC
TCCTCCTCCGTCACCGGCGTGCTGCGGCGGTGGGCGGAGCTCCTCCTGACGTGGCAGTAC
TCGGCGCCGTTCGCCGTCAACCTCGCGGCATCCGCCGCCTTCTTCAGCCTCCTTGGCGCC
GCCCCGATCTCCGTTGCCGTGCCCGTCACGAACGCCACCACCTTCGCCGCCACCGCTGTC
GCCGCCGCCCTCCTCGGCGAGGGCACGCGCGCAGCGCCCGCAGCGCTCGGCACGGCGCTC
ATCGTCCTCGGCGTCTGGGTCTGCATCTCCTAGCACTTCAGGTTGTGAAAAGGGACCCTT
TCTTGGGAATTTCTGTACTTTCTTTTTGTTTCTCTTAAAATGATGGAATAGTATGTACTC
ATGTTTGATGAAATTTTCTGTGCAAAGCTTTTGGAAATGATGAATGAATTATGGTCGAAT
TTATTCAGC