Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os05t0186300-01
CDS Infomation	cds chromosome:IRGSP-1.0:5:5293558:5297417:-1 gene:Os05g0186300 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:cytosolic NADP malic enzyme 2 description:Similar to NADP-malic enzyme. (Os05t0186300-01);Non-protein coding transcript. (Os05t0186300-03)
Sequence	ATGGCCGGCGGCGGCGTGGAGGACACGTACGGCGAGGACAGGGCCACCGAGGATCAGCTC ATCACCCCATGGTCCTTCTCCGTCGCCAGCGGGTACACGCTGCTGAGAGACCCGCGGCAC AACAAGGGTTTGGCCTTCTCGGAGGCGGAGCGCGACGCGCACTACCTCCGCGGCCTCCTC CCGCCATCCATCGTCTCGCAGGAGCTCCAGGAGAAGAAGCTCATGCACAACCTCCGCAAC TACACCGTCCCCCTCCAGCGCTACATCGCCATGATGGACCTCCAGGAGAGGAATGAGAGG CTGTTCTACAAGCTCCTGATCGACAACGTGGAGGAGCTGCTGCCGGTGGTGTACACGCCG ACGGTCGGGGAGGCCTGCCAGAAGTACGGCAGCATCTACAGGCGGCCACAGGGCCTGTAC ATCAGCCTCAAGGACAAGGGGAAGATCCTTGAGGTGCTCAAGAACTGGCCGGAGAGGAGC ATCCAGGTGATCGTCGTCACCGACGGCGAGCGCATTCTTGGCCTTGGAGATCTTGGTTGT CAGGGAATGGGTATTCCTGTCGGCAAACTGTCTCTGTACACTGCCCTTGGAGGAGTTCGC CCATCAGCTTGCCTTCCAATCACAATTGATGTTGGTACCAACAATGAGTCACTGCTCAAC GACGAATTCTACATTGGACTCAAGCAACGCCGTGCTACCGGAGAGGAATACCACGAGCTT CTTGAGGAGTTTATGACCGCAGTTAAGCAAAACTACGGCGAGAAAGTGCTCGTTCAGTTT GAAGACTTTGCCAACCACAATGCTTTTGACTTGCTTGCAAAGTACAGCAAGAGCCACCTT GTCTTCAACGACGACATTCAGGGAACAGCATCAGTGGTCCTCGCAGGTCTGATTGCGGCG CTCAAGGTGGTCGGTGGAACTCTTGCAGATCACACTTACCTGTTCCTTGGCGCCGGTGAG GCTGGAACTGGCATCGCAGAGCTCATTGCCCTCGAGATGTCAAAGCAGACGGAGATTCCG ATCAATGATTGCCGGAAGAAGGTGTGGCTGGTGGACTCGAGGGGGCTGATCGTGGAGTCG AGGAAGGAGTCGCTGCAGCACTTCAAGCAGCCATTCGCGCACGAGCACGAGCCGGTGAAG ACGCTGCTGGAGGCCGTGCAGTCCATCAAGCCGACCGTGCTCATCGGCACTTCCGGCGTC GGCAAGACATTCACCCAGGAGGTCGTCGAGGCCATGGCCGCCTTCAACGAGAAACCTGTC ATCTTCGCGCTCTCCAACCCGACGTCGCACTCGGAATGCACCGCGGAGGAGGCATACACC TGGACCAAGGGAAGTGCGGTGTTCGCGAGCGGGAGCCCGTTCGACGCGGTGGAGTACGAG GGGAAGACGTACGTGCCGGGGCAATCGAACAACGCCTACATCTTCCCGGGGTTCGGGCTG GGCGTGGTGATCTCGGGCGCCATCCGCGTCCACGACGACATGCTGCTGGCGGCGTCGGAG GCGCTGGCGGAGCAGGTGAGCGAGGACAACTTCGCCAGGGGGCTCATCTTCCCGCCCTTC ACCAACATCCGCAAGATCTCCGCACACATCGCCGCCAAGGTCGCCGCCAAGGCGTACGAG CTCGGCCTCGCCAGCCGCCTCCCGCGCCCCGACGACCTCGTCAAGTACGCCGAGAGCTGC ATGTACACCCCGGCCTACCGCTGCTACCGCTGA

Peptide Sequence

PEP ID	Os05t0186300-01
PEP Infomation	pep chromosome:IRGSP-1.0:5:5293558:5297417:-1 gene:Os05g0186300 transcript:Os05t0186300-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:cytosolic NADP malic enzyme 2 description:Similar to NADP-malic enzyme. (Os05t0186300-01);Non-protein coding transcript. (Os05t0186300-03)
Sequence	MAGGGVEDTYGEDRATEDQLITPWSFSVASGYTLLRDPRHNKGLAFSEAERDAHYLRGLL PPSIVSQELQEKKLMHNLRNYTVPLQRYIAMMDLQERNERLFYKLLIDNVEELLPVVYTP TVGEACQKYGSIYRRPQGLYISLKDKGKILEVLKNWPERSIQVIVVTDGERILGLGDLGC QGMGIPVGKLSLYTALGGVRPSACLPITIDVGTNNESLLNDEFYIGLKQRRATGEEYHEL LEEFMTAVKQNYGEKVLVQFEDFANHNAFDLLAKYSKSHLVFNDDIQGTASVVLAGLIAA LKVVGGTLADHTYLFLGAGEAGTGIAELIALEMSKQTEIPINDCRKKVWLVDSRGLIVES RKESLQHFKQPFAHEHEPVKTLLEAVQSIKPTVLIGTSGVGKTFTQEVVEAMAAFNEKPV IFALSNPTSHSECTAEEAYTWTKGSAVFASGSPFDAVEYEGKTYVPGQSNNAYIFPGFGL GVVISGAIRVHDDMLLAASEALAEQVSEDNFARGLIFPPFTNIRKISAHIAAKVAAKAYE LGLASRLPRPDDLVKYAESCMYTPAYRCYR

Transcript Sequence

Transcript ID	Os05t0186300-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:5:5293558:5297417:-1 gene:Os05g0186300 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:cytosolic NADP malic enzyme 2 description:Similar to NADP-malic enzyme. (Os05t0186300-01);Non-protein coding transcript. (Os05t0186300-03)
Sequence	ATCCCATCCACGCAAATATTTCTTCCTATAACAGGACAAGAGCAGATCGATCGTTTCCTT TTTATTTCTGAGGAGAAGAGGATCGATCGTTTCGTTCGATCGTTTGGTTTTTGAATTTTG AGGAGAAGAGAAGAGAAGAGGATCGGAAGAGATGGCCGGCGGCGGCGTGGAGGACACGTA CGGCGAGGACAGGGCCACCGAGGATCAGCTCATCACCCCATGGTCCTTCTCCGTCGCCAG CGGGTACACGCTGCTGAGAGACCCGCGGCACAACAAGGGTTTGGCCTTCTCGGAGGCGGA GCGCGACGCGCACTACCTCCGCGGCCTCCTCCCGCCATCCATCGTCTCGCAGGAGCTCCA GGAGAAGAAGCTCATGCACAACCTCCGCAACTACACCGTCCCCCTCCAGCGCTACATCGC CATGATGGACCTCCAGGAGAGGAATGAGAGGCTGTTCTACAAGCTCCTGATCGACAACGT GGAGGAGCTGCTGCCGGTGGTGTACACGCCGACGGTCGGGGAGGCCTGCCAGAAGTACGG CAGCATCTACAGGCGGCCACAGGGCCTGTACATCAGCCTCAAGGACAAGGGGAAGATCCT TGAGGTGCTCAAGAACTGGCCGGAGAGGAGCATCCAGGTGATCGTCGTCACCGACGGCGA GCGCATTCTTGGCCTTGGAGATCTTGGTTGTCAGGGAATGGGTATTCCTGTCGGCAAACT GTCTCTGTACACTGCCCTTGGAGGAGTTCGCCCATCAGCTTGCCTTCCAATCACAATTGA TGTTGGTACCAACAATGAGTCACTGCTCAACGACGAATTCTACATTGGACTCAAGCAACG CCGTGCTACCGGAGAGGAATACCACGAGCTTCTTGAGGAGTTTATGACCGCAGTTAAGCA AAACTACGGCGAGAAAGTGCTCGTTCAGTTTGAAGACTTTGCCAACCACAATGCTTTTGA CTTGCTTGCAAAGTACAGCAAGAGCCACCTTGTCTTCAACGACGACATTCAGGGAACAGC ATCAGTGGTCCTCGCAGGTCTGATTGCGGCGCTCAAGGTGGTCGGTGGAACTCTTGCAGA TCACACTTACCTGTTCCTTGGCGCCGGTGAGGCTGGAACTGGCATCGCAGAGCTCATTGC CCTCGAGATGTCAAAGCAGACGGAGATTCCGATCAATGATTGCCGGAAGAAGGTGTGGCT GGTGGACTCGAGGGGGCTGATCGTGGAGTCGAGGAAGGAGTCGCTGCAGCACTTCAAGCA GCCATTCGCGCACGAGCACGAGCCGGTGAAGACGCTGCTGGAGGCCGTGCAGTCCATCAA GCCGACCGTGCTCATCGGCACTTCCGGCGTCGGCAAGACATTCACCCAGGAGGTCGTCGA GGCCATGGCCGCCTTCAACGAGAAACCTGTCATCTTCGCGCTCTCCAACCCGACGTCGCA CTCGGAATGCACCGCGGAGGAGGCATACACCTGGACCAAGGGAAGTGCGGTGTTCGCGAG CGGGAGCCCGTTCGACGCGGTGGAGTACGAGGGGAAGACGTACGTGCCGGGGCAATCGAA CAACGCCTACATCTTCCCGGGGTTCGGGCTGGGCGTGGTGATCTCGGGCGCCATCCGCGT CCACGACGACATGCTGCTGGCGGCGTCGGAGGCGCTGGCGGAGCAGGTGAGCGAGGACAA CTTCGCCAGGGGGCTCATCTTCCCGCCCTTCACCAACATCCGCAAGATCTCCGCACACAT CGCCGCCAAGGTCGCCGCCAAGGCGTACGAGCTCGGCCTCGCCAGCCGCCTCCCGCGCCC CGACGACCTCGTCAAGTACGCCGAGAGCTGCATGTACACCCCGGCCTACCGCTGCTACCG CTGATCGAGCACGAGCCCACCGAGGAGGAAGACGATCGATCGAATTAAGCAATAAAATTT TTATTCAAATCTTGGCGCGAGCGTTAGCTGCCATTAGAGGGGTTTTCATTTTTAATTTTT TTTGTGTACCCATACATATACGTATACGTGTACTGCATACATACTAGAGCACCTGATGGT GCTTGTCGTCGTCGATTCTTTTGACCGATTTGAAGTTTGGTAGGGTGTAATAGCACTTAC TTTTGAGTTTTCCACATTGAGTTGATTCGGTGTAATAGGAGTCAAATTTGAGTTTCTTAT GATGGTTGTTCATGATCAGTTTCTGATGCAATGCGTCGTGTCATTTTTACCCAATAAAAG CAGAGATGCTTACTTAGTGG