Gene sequences

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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os05t0182600-01
CDS Infomation	cds chromosome:IRGSP-1.0:5:4965425:4971029:1 gene:Os05g0182600 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:SSRP1-B description:Similar to SSRP1 protein. (Os05t0182600-01)
Sequence	ATGACGGACGGCCACCACTTCAACAACATATCCCTCGGCGGCCGCGGCGGCAACAACCCT GGCCAGTTTAAACTTTATTCGGGAGGACTTGCATGGAAGAGGCAAGGTGGAGGAAAGACC ATTGAGGTTGAAAAGTCTGATATCACTTCTGTGACATGGATGGCAATCCCCAGATCCTAT CAGCTTGGTGTTTCAACAAAGGAGGGCCTCTTCTACAGGTTCTTTGGCTTCCGTGAACAG GATATCAGTTCATTGACTAACTTCATGGAAAAGAACATGAGAATCACACCAGAGGAGAAG CAGCTTTCTGTTGGTGGACATAATTGGGGCGGAATTGAAATCAATGGCAATATGCTTAGC TTTAATGTTGGTTCAAAGGAAGCATTTGAAGTCTCTCTAGCAGACGTAGCACAAACTCAG ATGCAAGGAAAAACAGATGTTGTTCTGGAGTTTCATGTGGATGATACTACTGGTGGTAAT GAGAAAGATTCATTGATGGATTTAAGCTTTCATGTACCAACTTCAAATACTCAATTCCCT GGAGATGAGAATCGTCCTTCAGCTCAGGTTTTATGGCAGGCTATCTTGAATAAGGCTGAT GTTGGCTCATCAGAGGAAGCTGTTGTTACATTTGATGGAATTGCTATTCTTACTCCAAGA GGTCGATACAGTGTTGAACTTCATCTGTCATTCTTACGACTCCAAGGACAAGCTAATGAT TTCAAAATTCAATATAGCAGTATTCTTCGCCTCTTTGTTTTACCAAAGTCAAATAATCCT CATACCTTTGTGGTTATCACTCTTGATCCACCAATTCGCAAAGGACAGACATTATATCCT CACATTGTTATTCAGTTTGAAACTGAAGCAGTCGTTCAAAGGGATCTGACATTAAGTGAT GAGGTTTTGGCTGAAAAGTACAAGGATAGACTGGAGAACTCTTACCAGGGTCTGATACAT GAAGTGTTCTCCAAGGTCCTTCGTGGCCTATCTGGTGCTAAAGTTACGAGGCCAAGCACG TTCCGCAGTTGTCAAGATGGATATGCAGTGAAATCATCACTCAAAGCTGAAGATGGATTG CTCTATCCGCTGGAGAAGGGCTTCTTCTTTCTACCAAAGCCCCCAACACTCATTCTGCAT GAGGAGATTGAGTATGTTGAATTTGAGCGACATGGTGCTGGGGGTGCTAGTATCTCATCT CACTATTTTGATCTCCTGGTCAAGCTGAAAAATGATCAAGAACATCTATTCAGAAATATC CAAAGAAATGAATACCATAATCTCTTCAATTTCATCAGTGGCAAGCATTTGAAAATCTTG AATCTTGGAGAAGCTCAAGGTAGAGCTGGTGGCGTTACAGCTGTTCTTCAGAGCACTGAT GATGATGCTGTTGATCCTCATCTGGAGCGGATCAGAAATCAGACTGGCGATGATGAGAGT GATGAAGAGGATGAAGATTTTGTGGCGGACAAGGACGACAGTGGATCTCCTACTGATGAT TCTGGAGAGGAGGGTTCTGACGCTAGTTTAAGTGGAGGAGAAAAGGAGAAATCTTCCAAA AAGGAAGCTAGTAGCTCAAAGGCGCCTTTGAAGAAGAGGAAGCCAAAGGGTGGGGATGCG GCGGAAGGCTCGGAGAAAAGAAAGCCAAAGAAAAAGAAGGATCCTAATGCCCCTAAAAGA GCAATTGCACCATTCATGTACTTCTCAAAAGCTGAGCGAGCTAATCTGAAGAACAGCAAT CCGGAGCTGGCTACCACAGAGATTGCGAAGAAGCTTGGGGAGAGGTGGCAAAAGATGACA GCCGAGGAGAAGCAGCCATACGTCGAGCAGTCTCAAGTTGACAAGAAGCGCTACGCGGAG GAGTCAGCCGCCTACCGCGGGGCGGCTGCCATGGATGTGGACTCCGGCCCTGCTTCGGAC TGA

Peptide Sequence

PEP ID	Os05t0182600-01
PEP Infomation	pep chromosome:IRGSP-1.0:5:4965425:4971029:1 gene:Os05g0182600 transcript:Os05t0182600-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:SSRP1-B description:Similar to SSRP1 protein. (Os05t0182600-01)
Sequence	MTDGHHFNNISLGGRGGNNPGQFKLYSGGLAWKRQGGGKTIEVEKSDITSVTWMAIPRSY QLGVSTKEGLFYRFFGFREQDISSLTNFMEKNMRITPEEKQLSVGGHNWGGIEINGNMLS FNVGSKEAFEVSLADVAQTQMQGKTDVVLEFHVDDTTGGNEKDSLMDLSFHVPTSNTQFP GDENRPSAQVLWQAILNKADVGSSEEAVVTFDGIAILTPRGRYSVELHLSFLRLQGQAND FKIQYSSILRLFVLPKSNNPHTFVVITLDPPIRKGQTLYPHIVIQFETEAVVQRDLTLSD EVLAEKYKDRLENSYQGLIHEVFSKVLRGLSGAKVTRPSTFRSCQDGYAVKSSLKAEDGL LYPLEKGFFFLPKPPTLILHEEIEYVEFERHGAGGASISSHYFDLLVKLKNDQEHLFRNI QRNEYHNLFNFISGKHLKILNLGEAQGRAGGVTAVLQSTDDDAVDPHLERIRNQTGDDES DEEDEDFVADKDDSGSPTDDSGEEGSDASLSGGEKEKSSKKEASSSKAPLKKRKPKGGDA AEGSEKRKPKKKKDPNAPKRAIAPFMYFSKAERANLKNSNPELATTEIAKKLGERWQKMT AEEKQPYVEQSQVDKKRYAEESAAYRGAAAMDVDSGPASD

Transcript Sequence

Transcript ID	Os05t0182600-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:5:4965425:4971029:1 gene:Os05g0182600 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:SSRP1-B description:Similar to SSRP1 protein. (Os05t0182600-01)
Sequence	AAAAAGCCAAAGCCCCACCCAAAGCGGCGACGCCCCTCTCTCTCTCTCTCTCTCTCTCTT CTCTTCTCTTCTCTCCTCCACGTCGCGGCTCGCGCCTCCAAATCCCCCCCCGCGAGGCGA GCAGGGCGAGGCGGCGAAAGCGCGACGCGCGAGCGGATCGAGGCGGCGGCGTCGGTGCCG GCATCCACCGCGTGCATAGGTTGCGTCGGCGGCGGCGGAAGCGGGGCGCGATGACGGACG GCCACCACTTCAACAACATATCCCTCGGCGGCCGCGGCGGCAACAACCCTGGCCAGTTTA AACTTTATTCGGGAGGACTTGCATGGAAGAGGCAAGGTGGAGGAAAGACCATTGAGGTTG AAAAGTCTGATATCACTTCTGTGACATGGATGGCAATCCCCAGATCCTATCAGCTTGGTG TTTCAACAAAGGAGGGCCTCTTCTACAGGTTCTTTGGCTTCCGTGAACAGGATATCAGTT CATTGACTAACTTCATGGAAAAGAACATGAGAATCACACCAGAGGAGAAGCAGCTTTCTG TTGGTGGACATAATTGGGGCGGAATTGAAATCAATGGCAATATGCTTAGCTTTAATGTTG GTTCAAAGGAAGCATTTGAAGTCTCTCTAGCAGACGTAGCACAAACTCAGATGCAAGGAA AAACAGATGTTGTTCTGGAGTTTCATGTGGATGATACTACTGGTGGTAATGAGAAAGATT CATTGATGGATTTAAGCTTTCATGTACCAACTTCAAATACTCAATTCCCTGGAGATGAGA ATCGTCCTTCAGCTCAGGTTTTATGGCAGGCTATCTTGAATAAGGCTGATGTTGGCTCAT CAGAGGAAGCTGTTGTTACATTTGATGGAATTGCTATTCTTACTCCAAGAGGTCGATACA GTGTTGAACTTCATCTGTCATTCTTACGACTCCAAGGACAAGCTAATGATTTCAAAATTC AATATAGCAGTATTCTTCGCCTCTTTGTTTTACCAAAGTCAAATAATCCTCATACCTTTG TGGTTATCACTCTTGATCCACCAATTCGCAAAGGACAGACATTATATCCTCACATTGTTA TTCAGTTTGAAACTGAAGCAGTCGTTCAAAGGGATCTGACATTAAGTGATGAGGTTTTGG CTGAAAAGTACAAGGATAGACTGGAGAACTCTTACCAGGGTCTGATACATGAAGTGTTCT CCAAGGTCCTTCGTGGCCTATCTGGTGCTAAAGTTACGAGGCCAAGCACGTTCCGCAGTT GTCAAGATGGATATGCAGTGAAATCATCACTCAAAGCTGAAGATGGATTGCTCTATCCGC TGGAGAAGGGCTTCTTCTTTCTACCAAAGCCCCCAACACTCATTCTGCATGAGGAGATTG AGTATGTTGAATTTGAGCGACATGGTGCTGGGGGTGCTAGTATCTCATCTCACTATTTTG ATCTCCTGGTCAAGCTGAAAAATGATCAAGAACATCTATTCAGAAATATCCAAAGAAATG AATACCATAATCTCTTCAATTTCATCAGTGGCAAGCATTTGAAAATCTTGAATCTTGGAG AAGCTCAAGGTAGAGCTGGTGGCGTTACAGCTGTTCTTCAGAGCACTGATGATGATGCTG TTGATCCTCATCTGGAGCGGATCAGAAATCAGACTGGCGATGATGAGAGTGATGAAGAGG ATGAAGATTTTGTGGCGGACAAGGACGACAGTGGATCTCCTACTGATGATTCTGGAGAGG AGGGTTCTGACGCTAGTTTAAGTGGAGGAGAAAAGGAGAAATCTTCCAAAAAGGAAGCTA GTAGCTCAAAGGCGCCTTTGAAGAAGAGGAAGCCAAAGGGTGGGGATGCGGCGGAAGGCT CGGAGAAAAGAAAGCCAAAGAAAAAGAAGGATCCTAATGCCCCTAAAAGAGCAATTGCAC CATTCATGTACTTCTCAAAAGCTGAGCGAGCTAATCTGAAGAACAGCAATCCGGAGCTGG CTACCACAGAGATTGCGAAGAAGCTTGGGGAGAGGTGGCAAAAGATGACAGCCGAGGAGA AGCAGCCATACGTCGAGCAGTCTCAAGTTGACAAGAAGCGCTACGCGGAGGAGTCAGCCG CCTACCGCGGGGCGGCTGCCATGGATGTGGACTCCGGCCCTGCTTCGGACTGAAGAGAAG AGACCTGAATTGCATTCCAGATTACCCTTAGTCTAGGAGGGCGACAGACAGGATACGGCT AGTGGCATCTCTATTTCCATGTAAATAAAACTTATGAGTTATCTGGATGTAAATAAAACT ATCGTAGGTATCTTTCGAGTCCCGTTCTATGAGTGTCTTATCGCTTTATCTTAGCTATAT ATATAGATAGCAGCTATAGTATAGTAGAGTTCTTCCCGCCATTTATGCTGGCCGGATAAC TTACCTTCACCTATGTAGCAGCAATAAGCATGCTTATCTGCTTAGTTAAATTATAAATGC GTGTTCTAGCTGGAGAATCACCTCT