Gene sequences

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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os05t0179000-01
CDS Infomation	cds chromosome:IRGSP-1.0:5:4710637:4715385:1 gene:Os05g0179000 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:RING finger protein OsRFPH2-5, RING-H2 protein 5 description:Zinc finger, RING/FYVE/PHD-type domain containing protein. (Os05t0179000-01)
Sequence	ATGGCCGTCCCTCCTGTTGAATCAGAAACAAGAAGTGAAGAAACAGATAATTTCCCTTTA CTTGCAGACCACATGGAAAATACTGGACATCATGCACATGCAGTTGATATCCCATGGGAT TCTTCACCATCGACATCTCGCCGAGATAATCATAATGGATTTGATCAATTACCTCGTATC TTAGAAGGTTCTCCTGGGACATCTACTCCATCTAACTCTCAGAATGGTCCTCTAGCAAGA AGAGATGATAATCGTGGTCGTCGTCAGCCTAGTCCCTTGAATTCTGGTTGCTGGATCTCA GTTGAGCTAGTTGTAAATGTTAGCCAGATCATAGCAGCTATTTGTGTTCTGTCAGTATCA AGGAATGAGCATCCACACTCTCCGTTATTTGAGTGGGTCATTGGTTATACAGTAGGTTGT ACTGCCACGCTGCCTCATCTTTACTGGCGCTATCTCCATCGCAACCTCCCAACCACTGGG CAAGAGCCAACAGTTCAGAATATCCCTCCAAACAACACCCCTGAAGCTAATTCATATGGA GTAACCGGCACAAATGGAGTCTCAAGAAACAATGAGGCAACAGTAAATCCAAGGTTCCAA GCTTTTGCTGATCACTTCAAAATGGCTCTGGACTGTTTCTTTGCTGTGTGGTTCGTTGTG GGAAATGTATGGGTATTTGGTGGACATTCTTCTGCTCACGACGCGCCCAACTTGTACAGG TTGTGTATTGCCTTCCTCACATTCAGCTGCATCGGCTATGCTATGCCTTTCATCCTCTGC GCATTGATATGTTGCTGCCTACCCTGCATAATCTCTATCTTGGGATTTCGGGAAGATCTA AACCAAAACAGAGGAGCTAGTGCGGAAACAATCAATGCCTTGGGAACATGCAAGTTCAAG TCAAAGAAAACTCGTGATGGAGATGGAAACGAAGTTGGTGTCGGTGTTGTGGCTGCTGGA ACAAACAAGGAGCGAGTCATTTCTGCAGAAGATGCTGTCTGCTGCATCTGCTTGGCCAGA TATGTCGATAACGATGATCTCCGAGAGCTCCCTTGTGCGCACTTCTTCCACAAGGATTGT GTGGACAAATGGCTCAAGATAAACGCGCTGTGCCCCCTTTGCAAGGCTGAGATAGATGGT GTCTCCACAAGTGCTCCAGCCATTGGCTTTGGGCGTCGCCACAGCGACAACAGGGTAGGA AACGACATTGAATCACAACTATAA

Peptide Sequence

PEP ID	Os05t0179000-01
PEP Infomation	pep chromosome:IRGSP-1.0:5:4710637:4715385:1 gene:Os05g0179000 transcript:Os05t0179000-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:RING finger protein OsRFPH2-5, RING-H2 protein 5 description:Zinc finger, RING/FYVE/PHD-type domain containing protein. (Os05t0179000-01)
Sequence	MAVPPVESETRSEETDNFPLLADHMENTGHHAHAVDIPWDSSPSTSRRDNHNGFDQLPRI LEGSPGTSTPSNSQNGPLARRDDNRGRRQPSPLNSGCWISVELVVNVSQIIAAICVLSVS RNEHPHSPLFEWVIGYTVGCTATLPHLYWRYLHRNLPTTGQEPTVQNIPPNNTPEANSYG VTGTNGVSRNNEATVNPRFQAFADHFKMALDCFFAVWFVVGNVWVFGGHSSAHDAPNLYR LCIAFLTFSCIGYAMPFILCALICCCLPCIISILGFREDLNQNRGASAETINALGTCKFK SKKTRDGDGNEVGVGVVAAGTNKERVISAEDAVCCICLARYVDNDDLRELPCAHFFHKDC VDKWLKINALCPLCKAEIDGVSTSAPAIGFGRRHSDNRVGNDIESQL

Transcript Sequence

Transcript ID	Os05t0179000-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:5:4710637:4715385:1 gene:Os05g0179000 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:RING finger protein OsRFPH2-5, RING-H2 protein 5 description:Zinc finger, RING/FYVE/PHD-type domain containing protein. (Os05t0179000-01)
Sequence	GAGTCAAGTCGCCGACTTTTGGAGTTCTCCTCGCCCCAGCTCGGTAAATTCCTTCGCTTT TTCTCCGCTGGTTCGGAGATTTCCATGTTCACTTTTGTTTTTTTTTTTAATTAAGGGCTT TGCTTTGATGGAAGGGTTGGGTACTGGTTCCTTCCCTCCGGATCAATCTTGCTTCTTGCG CTCACCCAACCTAGTAATTTTTTCCTCTCCCGATTTGTTTAATGCTAATCTAGGTGGTTG ATGATGCTTGCGAGCCAGGCATTGATTCGGCTTTAAGCTTGCCTGCTTGCTTCGCCGTCT TGTTCTTTGAGTTCTTGGTTTTCATGGATCCTTGATCCGATTTAGGGGTTGCTGCTGCTA GCCGTGGTTGGTGAGACGGTTCTTGGAGAAGGGGGATTTCTTGAGGTGCTTTTCTGGGAG GTGTAACCAACTAAATTCCTATGCTACCTTCTGGTTGATGGCCGTCCCTCCTGTTGAATC AGAAACAAGAAGTGAAGAAACAGATAATTTCCCTTTACTTGCAGACCACATGGAAAATAC TGGACATCATGCACATGCAGTTGATATCCCATGGGATTCTTCACCATCGACATCTCGCCG AGATAATCATAATGGATTTGATCAATTACCTCGTATCTTAGAAGGTTCTCCTGGGACATC TACTCCATCTAACTCTCAGAATGGTCCTCTAGCAAGAAGAGATGATAATCGTGGTCGTCG TCAGCCTAGTCCCTTGAATTCTGGTTGCTGGATCTCAGTTGAGCTAGTTGTAAATGTTAG CCAGATCATAGCAGCTATTTGTGTTCTGTCAGTATCAAGGAATGAGCATCCACACTCTCC GTTATTTGAGTGGGTCATTGGTTATACAGTAGGTTGTACTGCCACGCTGCCTCATCTTTA CTGGCGCTATCTCCATCGCAACCTCCCAACCACTGGGCAAGAGCCAACAGTTCAGAATAT CCCTCCAAACAACACCCCTGAAGCTAATTCATATGGAGTAACCGGCACAAATGGAGTCTC AAGAAACAATGAGGCAACAGTAAATCCAAGGTTCCAAGCTTTTGCTGATCACTTCAAAAT GGCTCTGGACTGTTTCTTTGCTGTGTGGTTCGTTGTGGGAAATGTATGGGTATTTGGTGG ACATTCTTCTGCTCACGACGCGCCCAACTTGTACAGGTTGTGTATTGCCTTCCTCACATT CAGCTGCATCGGCTATGCTATGCCTTTCATCCTCTGCGCATTGATATGTTGCTGCCTACC CTGCATAATCTCTATCTTGGGATTTCGGGAAGATCTAAACCAAAACAGAGGAGCTAGTGC GGAAACAATCAATGCCTTGGGAACATGCAAGTTCAAGTCAAAGAAAACTCGTGATGGAGA TGGAAACGAAGTTGGTGTCGGTGTTGTGGCTGCTGGAACAAACAAGGAGCGAGTCATTTC TGCAGAAGATGCTGTCTGCTGCATCTGCTTGGCCAGATATGTCGATAACGATGATCTCCG AGAGCTCCCTTGTGCGCACTTCTTCCACAAGGATTGTGTGGACAAATGGCTCAAGATAAA CGCGCTGTGCCCCCTTTGCAAGGCTGAGATAGATGGTGTCTCCACAAGTGCTCCAGCCAT TGGCTTTGGGCGTCGCCACAGCGACAACAGGGTAGGAAACGACATTGAATCACAACTATA ACTCTCTTCCCACTTCGTTGGCAGCGTGGATCACGCCTTTGATGAGGCCTTCCACACATC AACCTGTAAATTATAGAGGTAGACATCAAGATGTAAAGGGTCCTCTTACGATCCAACAAA GTTCTTTTCTGAATGACTACTGCCTCCACTGTCAGTATATATTGCTTCCAGCATTTGTTT CTTCTC