Gene sequences

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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os05t0178400-01
CDS Infomation	cds chromosome:IRGSP-1.0:5:4669135:4672258:-1 gene:Os05g0178400 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Protein phosphatase 2A B'kappa subunit. (Os05t0178400-01)
Sequence	ATGTGGAAGCAGTTTCTCGGCAAGATCTCGTGGAAGGCGCCGAAATCCGGCGGCGGCGGC GGCGGCTCGCCGACGGCCAAGTCGCCGCTGTCGAAGGGCGCCGGGAATGGGGAGCCTCCC GCGCCGCCCGCGGCCGCCGCAGGAGGAGGAGGAGGAGCGGAGGGGGAGACCAGGGAGGAC GTGTTCCTCCGGAAGCTGAACGTCTGCTGCGTCGTGTTCGACTTCTCCTCCGCCGCCGCC GCTGCCGCCGCAGAGCGCGGGAGGGACTCGCCGGAGAGGGAGAGGAAGCGGCAGGTGCTC GTGTCCCTCGTCGACTGCGTCGGCGCCGCCGAGGAGCCCCTCACCGAGGCGATGATCTCC GGCTGCGTCCGCATGTTCGCCATCAACCTCTTCAGGGTGTTCCCGCCCAAGGTCCGGTCC GGCGCCGCCGGGGCGGCGGAGGCCGACGAAGACGAGCCCTTCTTCGATCCCTCATGGTAC CACCTGCAGGCCGTTTATGAGCTGCTCCTCCGCTTCGTCATGTCCCCGGTCGTCGACGTC AAGATTGCTCGCAAGTACATGGACAATTCTTTTGTGTCTAGGTTGCTCGACTTGTTCGAT TCCGATGATCCGAGAGAAAGGGAATGCTTGAAGACAGTCTTGCATAGGATATACGGCAAA TTCATGGGCAACCGGCCTTTCATCCGCAAGGCGGTGAGCAATATCTTCTATAGGTTCGTG TTCGAGACCGATCGCCACAATGGGATTGCTGAGCTGTTGGAGGTGTTTGGGAGTGTGATT AGTGGGTTCGCGAAGCCATTGAAGGAGGAGCATAAGTTGTTCCTGTGGAAGGCGTTAGTT CCTCTTCACAAACCGAAAACGGTGGGCGTGTATCTCCCGCAATTGACGTATTGTATTATA CAATTCATCGAGAAGGAACCAAAGCTCGCGGGGACTGTAATCAGAGGCCTACTGAAGTAC TGGCCAGTGACGAACAGTCAGAAGGAGATGATGTTCCTTGGGGAGTTGGAGGAGGTGCTG GAATTGACAGAAATGGCTGAGTTCCAGAAGTGCATGGTTCCGCTGTTTCGAAGGATTGCA CACTGTCTAAATAGCTCACACTTTCAGGTTGCTGAGAGGGCACTATTCCTGTGGAACAAT GAGCACTTGTTTGATTTGATCTCCCAAAATCGCCAAACTATTATGCCGATCATATATCCA GCGCTGGAAAGGAACACTCGTTGGCACTGGAACCAATCAGTTCTAAATGTAACAATGAAC GTCCGGAAAATGTTCCTTGAAATGGATGAGGGACTGTTGTTAACTTGTCAGAGGAATTTC CAAGAGGAGGAAGAAAAGCGAGCTGCATCTGAGGAGCGGAGAAAGCTTATATGGGAGAAC CTAGAGAGAAACGCGTCATTCCGTCCAGTCACCGGAGACATTGGTTTCTCTGTTCTTCCT GCATCTGCTCCCTTGGTAGCACCCACCATGACATAA

Peptide Sequence

PEP ID	Os05t0178400-01
PEP Infomation	pep chromosome:IRGSP-1.0:5:4669135:4672258:-1 gene:Os05g0178400 transcript:Os05t0178400-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Protein phosphatase 2A B'kappa subunit. (Os05t0178400-01)
Sequence	MWKQFLGKISWKAPKSGGGGGGSPTAKSPLSKGAGNGEPPAPPAAAAGGGGGAEGETRED VFLRKLNVCCVVFDFSSAAAAAAAERGRDSPERERKRQVLVSLVDCVGAAEEPLTEAMIS GCVRMFAINLFRVFPPKVRSGAAGAAEADEDEPFFDPSWYHLQAVYELLLRFVMSPVVDV KIARKYMDNSFVSRLLDLFDSDDPRERECLKTVLHRIYGKFMGNRPFIRKAVSNIFYRFV FETDRHNGIAELLEVFGSVISGFAKPLKEEHKLFLWKALVPLHKPKTVGVYLPQLTYCII QFIEKEPKLAGTVIRGLLKYWPVTNSQKEMMFLGELEEVLELTEMAEFQKCMVPLFRRIA HCLNSSHFQVAERALFLWNNEHLFDLISQNRQTIMPIIYPALERNTRWHWNQSVLNVTMN VRKMFLEMDEGLLLTCQRNFQEEEEKRAASEERRKLIWENLERNASFRPVTGDIGFSVLP ASAPLVAPTMT

Transcript Sequence

Transcript ID	Os05t0178400-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:5:4669135:4672258:-1 gene:Os05g0178400 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Protein phosphatase 2A B'kappa subunit. (Os05t0178400-01)
Sequence	CCCTCCCCAACATCCCGCCCCCGGATCTGAGCCGCTGCGGCGGGCACAACACAGCGCGTG CGTGGGTGGCAAGACGGGTTCTTTGCCTTTGCAACTTTGCAAGATTTGGGCTTTTGGTTT CTTGGTGGTTGTGGATTTTTTTTTTTTGAGAGGGATGGGTGTTTGATTGGAGTGGGTTGG GAGCCATGTGGAAGCAGTTTCTCGGCAAGATCTCGTGGAAGGCGCCGAAATCCGGCGGCG GCGGCGGCGGCTCGCCGACGGCCAAGTCGCCGCTGTCGAAGGGCGCCGGGAATGGGGAGC CTCCCGCGCCGCCCGCGGCCGCCGCAGGAGGAGGAGGAGGAGCGGAGGGGGAGACCAGGG AGGACGTGTTCCTCCGGAAGCTGAACGTCTGCTGCGTCGTGTTCGACTTCTCCTCCGCCG CCGCCGCTGCCGCCGCAGAGCGCGGGAGGGACTCGCCGGAGAGGGAGAGGAAGCGGCAGG TGCTCGTGTCCCTCGTCGACTGCGTCGGCGCCGCCGAGGAGCCCCTCACCGAGGCGATGA TCTCCGGCTGCGTCCGCATGTTCGCCATCAACCTCTTCAGGGTGTTCCCGCCCAAGGTCC GGTCCGGCGCCGCCGGGGCGGCGGAGGCCGACGAAGACGAGCCCTTCTTCGATCCCTCAT GGTACCACCTGCAGGCCGTTTATGAGCTGCTCCTCCGCTTCGTCATGTCCCCGGTCGTCG ACGTCAAGATTGCTCGCAAGTACATGGACAATTCTTTTGTGTCTAGGTTGCTCGACTTGT TCGATTCCGATGATCCGAGAGAAAGGGAATGCTTGAAGACAGTCTTGCATAGGATATACG GCAAATTCATGGGCAACCGGCCTTTCATCCGCAAGGCGGTGAGCAATATCTTCTATAGGT TCGTGTTCGAGACCGATCGCCACAATGGGATTGCTGAGCTGTTGGAGGTGTTTGGGAGTG TGATTAGTGGGTTCGCGAAGCCATTGAAGGAGGAGCATAAGTTGTTCCTGTGGAAGGCGT TAGTTCCTCTTCACAAACCGAAAACGGTGGGCGTGTATCTCCCGCAATTGACGTATTGTA TTATACAATTCATCGAGAAGGAACCAAAGCTCGCGGGGACTGTAATCAGAGGCCTACTGA AGTACTGGCCAGTGACGAACAGTCAGAAGGAGATGATGTTCCTTGGGGAGTTGGAGGAGG TGCTGGAATTGACAGAAATGGCTGAGTTCCAGAAGTGCATGGTTCCGCTGTTTCGAAGGA TTGCACACTGTCTAAATAGCTCACACTTTCAGGTTGCTGAGAGGGCACTATTCCTGTGGA ACAATGAGCACTTGTTTGATTTGATCTCCCAAAATCGCCAAACTATTATGCCGATCATAT ATCCAGCGCTGGAAAGGAACACTCGTTGGCACTGGAACCAATCAGTTCTAAATGTAACAA TGAACGTCCGGAAAATGTTCCTTGAAATGGATGAGGGACTGTTGTTAACTTGTCAGAGGA ATTTCCAAGAGGAGGAAGAAAAGCGAGCTGCATCTGAGGAGCGGAGAAAGCTTATATGGG AGAACCTAGAGAGAAACGCGTCATTCCGTCCAGTCACCGGAGACATTGGTTTCTCTGTTC TTCCTGCATCTGCTCCCTTGGTAGCACCCACCATGACATAATATGACATGCGTTCGGAAT TTCGAATGTACTTCGGTTCATTTCATTGTTAGCTTGTATGGGTTATGTGCAGGGCATTTT GTTATATTTGTAAGCCCCTTGTGCTCAAGTCTGTAATTAATAGTTATTGGTTTGAGGATG AACTTGTGATTCTTTAATGGTGTACTCTCTAGTGATGGACATTTCTCTGTTTGAGAAGAT AATGTCCAATTAAACCCGACTGCTCTGTGAACAACTGAGGATACTGAGATTGATTTTCTT GG