Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os05t0176500-02
CDS Infomation

cds chromosome:IRGSP-1.0:5:4585199:4588999:-1 gene:Os05g0176500 gene_biotype:protein_coding transcript_biotype:protein_coding description:ATP10 family protein. (Os05t0176500-02)
Sequence

ATGATGAGGGCACGGTGGGCGGCGGGGATGCTGCGCCGCGCTAGCTCTGGCGAGGCTTCG
CTCGCCGCGCGCGCGGTCTTCGCGCGCGGCTTCCTCGGCCTCAACATGAAGGCGAGTAAG
GAGACCATCGAGAAGAAGGAGAAGGATAAGGCCAGGCTTATGGATGAAATGAGCAGGGGG
TACTTCGCCGACATCGCAGAGATACGCAAGAACGGCGGCAAGCTTGCGACAGCGAATAAG
ATCATCATTCCGGAAATCGCAGCCGTGAAGTTCCCTGATCTTTCTGTGAAGTCCCCTGAT
GGCAGGACAGTGAATTTGCCGCTTGTCGCACCTCCGCGAAACGATGATCCCCAGACTGGC
AATACAGTGGACACACAAAATGATGATTGTAAGGCTGGTGATATGGTGGTTCCTGATGCT
TCATTGGTGTGCCTTTCCTTTCGCGCAAGCTCCCAGAAAATGGCAGAAACGTGGAGCCTA
CCTTTTCTTGATGCATTTAGTTCTGCTGGGAATATTCAAGTGTATGAGGTCTCATTTATT
GATTCATGGCTGTTATCATCAAGTCCTGTGAGACAAGTATTCCTCAAGGTGATGACAAAA
TCCAACAATCCACAGAGACATGCTGTATATGCCTTTGGTGACCACTATTATTTCAGGAAG
AAGCTTCATATCCTTAACCTTCTTACTGGGTACATATACCTGGTTGATCGCCTCGGAAGA
GTGAGGTGGCAAGGTTTCGGATCTGCGACGCAGGAAGAGTTGTCATCGCTAACTGCATGT
ACCTCCATTTTGTTAGATGGAAAATGA

Peptide Sequence

PEP ID

Os05t0176500-02
PEP Infomation

pep chromosome:IRGSP-1.0:5:4585199:4588999:-1 gene:Os05g0176500 transcript:Os05t0176500-02 gene_biotype:protein_coding transcript_biotype:protein_coding description:ATP10 family protein. (Os05t0176500-02)
Sequence

MMRARWAAGMLRRASSGEASLAARAVFARGFLGLNMKASKETIEKKEKDKARLMDEMSRG
YFADIAEIRKNGGKLATANKIIIPEIAAVKFPDLSVKSPDGRTVNLPLVAPPRNDDPQTG
NTVDTQNDDCKAGDMVVPDASLVCLSFRASSQKMAETWSLPFLDAFSSAGNIQVYEVSFI
DSWLLSSSPVRQVFLKVMTKSNNPQRHAVYAFGDHYYFRKKLHILNLLTGYIYLVDRLGR
VRWQGFGSATQEELSSLTACTSILLDGK

Transcript Sequence

Transcript ID

Os05t0176500-02
Transcript Infomation

cdna chromosome:IRGSP-1.0:5:4585199:4588999:-1 gene:Os05g0176500 gene_biotype:protein_coding transcript_biotype:protein_coding description:ATP10 family protein. (Os05t0176500-02)
Sequence

ACTACTACTACTCCGTCCTCCTCTTCACCGGTTAGATCGGCGGCGGCGGCGGCGATGATG
AGGGCACGGTGGGCGGCGGGGATGCTGCGCCGCGCTAGCTCTGGCGAGGCTTCGCTCGCC
GCGCGCGCGGTCTTCGCGCGCGGCTTCCTCGGCCTCAACATGAAGGCGAGTAAGGAGACC
ATCGAGAAGAAGGAGAAGGATAAGGCCAGGCTTATGGATGAAATGAGCAGGGGGTACTTC
GCCGACATCGCAGAGATACGCAAGAACGGCGGCAAGCTTGCGACAGCGAATAAGATCATC
ATTCCGGAAATCGCAGCCGTGAAGTTCCCTGATCTTTCTGTGAAGTCCCCTGATGGCAGG
ACAGTGAATTTGCCGCTTGTCGCACCTCCGCGAAACGATGATCCCCAGACTGGCAATACA
GTGGACACACAAAATGATGATTGTAAGGCTGGTGATATGGTGGTTCCTGATGCTTCATTG
GTGTGCCTTTCCTTTCGCGCAAGCTCCCAGAAAATGGCAGAAACGTGGAGCCTACCTTTT
CTTGATGCATTTAGTTCTGCTGGGAATATTCAAGTGTATGAGGTCTCATTTATTGATTCA
TGGCTGTTATCATCAAGTCCTGTGAGACAAGTATTCCTCAAGGTGATGACAAAATCCAAC
AATCCACAGAGACATGCTGTATATGCCTTTGGTGACCACTATTATTTCAGGAAGAAGCTT
CATATCCTTAACCTTCTTACTGGGTACATATACCTGGTTGATCGCCTCGGAAGAGTGAGG
TGGCAAGGTTTCGGATCTGCGACGCAGGAAGAGTTGTCATCGCTAACTGCATGTACCTCC
ATTTTGTTAGATGGAAAATGAGATTTAGATGGATACTGAAATATTTGGGGTTGGAGAAAT
TTTGTCATTGCGAATCCATAGCTGTATCACCTCTCGTTTCAGCATATTGAGGGATGATTT
TTTTTCCTCGCGGTTAATAAGCGTAAATTGGATTGATTTTCTCCTGCCCAATGACATTGT
GTAAACAGCATTGCTTGCATGTCATTGTTATTCTGGGAACTC