Gene sequences

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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os05t0176400-01
CDS Infomation	cds chromosome:IRGSP-1.0:5:4581331:4584038:-1 gene:Os05g0176400 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 34 description:Zinc finger, CCCH-type domain containing protein. (Os05t0176400-01)
Sequence	ATGGCGGCCGCGGCGGAGGGCGATGAGGACCCGCGCTGGAGGAGGTGCAACACCGACTGC GTCTACTTCCTCGCCTCCCCCTTCACCTGCACCAAGGGGTCCAAGTGCGAGTACCGCCAT GCCGATGGCGCCCGGTTCAACCGCCGGAATTGCTGGTACTGGTTCAAGGGCAACTGCGTC AACCCGAGCTGCACATTTCGTCACCCCCCACTGGAAAACTTAAACAAAACCAAATCTTTA GCAGACCCACTCTCATTGTGTTCTACTTCTGTCAAGGCAGCTAACCCTTGTTATTTCTAC TATAACTCGCACTGTTCAAAAGGTGACAATTGCCCCTACCTCCATGAGCCTCTAACTTCT AATGATGCTGTGGGAACTTCTTGTAAAGCTACCACTTCCAATCCTGCTGTAAGTAAAAGT TATGTTGGAGATGAGATGGTTGAAGAATCGAAAGACACTATCACAAATCCCTGTCAAGAT ACCTCTTGCCATATAAAAGAAGTTCCTGTGTCAATCAATCCTGAATTTGGTGAAGCTGAA GCTGTTTCCGGTGCACTTGAAACATCAACTGATATAGATGAATACATGAAATGTTCCGCA GTCTCAGATCTTAATTCAGGAGATTCAACTATGGACCACACAGAACAAGATGAGCGTGAT TCCTCTCCTGGATTTGATGTGCTTGTGGATGATTGCCTCTCTAACAAGAGTGATCTTGAA CATCAATTGACTACAGAGAGTGATAATAAGGTGCTTCATGCAGAATATGGTATTAGAGAT CCAGTTCTTTATGATATGTATTACCATGATCCAGAGTACTATAACTATGAACCAGAATTT TGTGGTCTTGATGATCGGCAAGGTTACCTTTATCTTTGCCAGCCTAACGGAGCTCATGAG CATGAAAGTGAGATCACTTTGGGGCATTTACTACCACAAAATACTGAGGTCACTTCTGAT GAATATGACAGAAGGTTCTTCAATCCCAGAAACTTCACCAGCTCAGTGGCAGATACTAAC TTTGTTCATCAGCACACCCAGATTAGACACATCTCAAAAAGAAGACCTGAGAATAGAAAA GGTGCAAAGGGAAAGAAGGATTGCATTAAGAGAAGCCGTTGCCTTGAACCCAAGAATAGT ACTCAACAGATTGAATCAATGCCAACTCGTCAAAGGAAAGATTATTTGATGGGAGAGTGT CCTCAACCTGCTAACCATGCTACTTTCAGGGGACGGAGGAAGAAAAATAGAGGAAAGCAA CAGCATGTTCTTTCTGCTAAATCTTCTGAACATCCTACTGCAGATTTTACTGGGCCGAAG ACCCTTGCTCAGATAAAAGAAGAGAAATGTAAATCCAACTCAAGTTTTAGCCACTCCACT GCTTGCACGCCTAATGTGAGATCCTTCTCAGATGATTTTGAGGGGCCCAAATCTCTGACC GAGCTTCTCATGACTAAGAGTAGGAGTTCTGTTGGCAAGTGA

Peptide Sequence

PEP ID	Os05t0176400-01
PEP Infomation	pep chromosome:IRGSP-1.0:5:4581331:4584038:-1 gene:Os05g0176400 transcript:Os05t0176400-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 34 description:Zinc finger, CCCH-type domain containing protein. (Os05t0176400-01)
Sequence	MAAAAEGDEDPRWRRCNTDCVYFLASPFTCTKGSKCEYRHADGARFNRRNCWYWFKGNCV NPSCTFRHPPLENLNKTKSLADPLSLCSTSVKAANPCYFYYNSHCSKGDNCPYLHEPLTS NDAVGTSCKATTSNPAVSKSYVGDEMVEESKDTITNPCQDTSCHIKEVPVSINPEFGEAE AVSGALETSTDIDEYMKCSAVSDLNSGDSTMDHTEQDERDSSPGFDVLVDDCLSNKSDLE HQLTTESDNKVLHAEYGIRDPVLYDMYYHDPEYYNYEPEFCGLDDRQGYLYLCQPNGAHE HESEITLGHLLPQNTEVTSDEYDRRFFNPRNFTSSVADTNFVHQHTQIRHISKRRPENRK GAKGKKDCIKRSRCLEPKNSTQQIESMPTRQRKDYLMGECPQPANHATFRGRRKKNRGKQ QHVLSAKSSEHPTADFTGPKTLAQIKEEKCKSNSSFSHSTACTPNVRSFSDDFEGPKSLT ELLMTKSRSSVGK

Transcript Sequence

Transcript ID	Os05t0176400-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:5:4581331:4584038:-1 gene:Os05g0176400 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 34 description:Zinc finger, CCCH-type domain containing protein. (Os05t0176400-01)
Sequence	GGCCGTCGCGCTCCGCTTTTCCTCCGCCGCCGCCTCCTCCTCATCCCTCCTCCCGCGGAG AGGAGAGGAGAGCCGAGAGAGGAAGTGGAGCAATGGCGGCCGCGGCGGAGGGCGATGAGG ACCCGCGCTGGAGGAGGTGCAACACCGACTGCGTCTACTTCCTCGCCTCCCCCTTCACCT GCACCAAGGGGTCCAAGTGCGAGTACCGCCATGCCGATGGCGCCCGGTTCAACCGCCGGA ATTGCTGGTACTGGTTCAAGGGCAACTGCGTCAACCCGAGCTGCACATTTCGTCACCCCC CACTGGAAAACTTAAACAAAACCAAATCTTTAGCAGACCCACTCTCATTGTGTTCTACTT CTGTCAAGGCAGCTAACCCTTGTTATTTCTACTATAACTCGCACTGTTCAAAAGGTGACA ATTGCCCCTACCTCCATGAGCCTCTAACTTCTAATGATGCTGTGGGAACTTCTTGTAAAG CTACCACTTCCAATCCTGCTGTAAGTAAAAGTTATGTTGGAGATGAGATGGTTGAAGAAT CGAAAGACACTATCACAAATCCCTGTCAAGATACCTCTTGCCATATAAAAGAAGTTCCTG TGTCAATCAATCCTGAATTTGGTGAAGCTGAAGCTGTTTCCGGTGCACTTGAAACATCAA CTGATATAGATGAATACATGAAATGTTCCGCAGTCTCAGATCTTAATTCAGGAGATTCAA CTATGGACCACACAGAACAAGATGAGCGTGATTCCTCTCCTGGATTTGATGTGCTTGTGG ATGATTGCCTCTCTAACAAGAGTGATCTTGAACATCAATTGACTACAGAGAGTGATAATA AGGTGCTTCATGCAGAATATGGTATTAGAGATCCAGTTCTTTATGATATGTATTACCATG ATCCAGAGTACTATAACTATGAACCAGAATTTTGTGGTCTTGATGATCGGCAAGGTTACC TTTATCTTTGCCAGCCTAACGGAGCTCATGAGCATGAAAGTGAGATCACTTTGGGGCATT TACTACCACAAAATACTGAGGTCACTTCTGATGAATATGACAGAAGGTTCTTCAATCCCA GAAACTTCACCAGCTCAGTGGCAGATACTAACTTTGTTCATCAGCACACCCAGATTAGAC ACATCTCAAAAAGAAGACCTGAGAATAGAAAAGGTGCAAAGGGAAAGAAGGATTGCATTA AGAGAAGCCGTTGCCTTGAACCCAAGAATAGTACTCAACAGATTGAATCAATGCCAACTC GTCAAAGGAAAGATTATTTGATGGGAGAGTGTCCTCAACCTGCTAACCATGCTACTTTCA GGGGACGGAGGAAGAAAAATAGAGGAAAGCAACAGCATGTTCTTTCTGCTAAATCTTCTG AACATCCTACTGCAGATTTTACTGGGCCGAAGACCCTTGCTCAGATAAAAGAAGAGAAAT GTAAATCCAACTCAAGTTTTAGCCACTCCACTGCTTGCACGCCTAATGTGAGATCCTTCT CAGATGATTTTGAGGGGCCCAAATCTCTGACCGAGCTTCTCATGACTAAGAGTAGGAGTT CTGTTGGCAAGTGACCATATCCTAGCAAGTGTTTATGTAAAAGTGCAGCTCAGTGAGATT TCTGCTTTACTTGGTTAGGATGATGCCAACAGTTTTTTTTTTTTTTTTGAGGATGAAAGC AATTCAGTCAAAAGGTCACAGAAGGTCTAGTGACAACTTTCTTTGAACAAATTCTTATGA GTTAACCTGCCAGTGAATGTGCGGATGAAGAAGGGATCCATATTAAGG