Gene sequences

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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os05t0169200-01
CDS Infomation	cds chromosome:IRGSP-1.0:5:4144983:4148965:1 gene:Os05g0169200 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:AUTOPHAGY ASSOCIATED GENE 18D description:WD40 repeat-like domain containing protein. (Os05t0169200-01)
Sequence	ATGGGCCATGTTGAAGAAGCATCTGGCAGTGATGACGATGGGGTGGAGTTGCTGTCGGTT TCTTGGAACCAGGACAACAGCTGCTTCATTGCAGCAACCACCAATGGCTTCAGGGTCTTC AGTTGCAAGCCCTTCCACGAGACCATGAGGAGGATGTTTGGCCCCAATGGAGGGATTGGA ATCGCCGAGATGCTGTTCCGCACCAGCATATTCGGATTGGCAGGTGCAGAGTCCAACACC GAGTTCCCACCCACCATGCTCCAGCTCTGGGACGATTACAACGAACGCCGCATCCACAAG TACAACTTCACAAGCGAGATCCGAGCCGTCAGGCTGTCCAAGGACTACTTTGTGGTTGTT CTTGAGAAGACCATCAATGTTTACAGGTTCAAGGACCTGAGGCTGTTCTACCAGGCTAGG ACGGTGTCGAACCCGAATGGGCTGTGCTGCCTGTCTCATCACGCAAACGCCTCCGTTTTC GCCTGCCCTGGGACGTCCAAGGGGCAGGTTCTCATTGAGCATTTCGGGTTGAAGGAGACC AGGTTCATTGCTGCTCATGACTCGCCCCTTTCGTGCATGACAATGGCCTTGGATGGAACA CTCTTGGCTACTGCCAGTGTCAGGGGTACTTTGATCAGGATATTCAACACTAGGGACGGC ACCTGCGTGCAGGAGGTGCGGAGAGGACTTGACAGAGCTGAGATATATAGCATTGCACTG TCACCAAATGTGCAGTGGCTAGCAGTCTCCAGTGACAAAGGAACGGTGCATGTCTTCAGT CTGAGGGTGAAAGATGCAGAGGAGGATGCAAAAAAGGGGGAGTCTGCAACTGCAGGTGCA CAGGTGAATGACAATTGCAACTATGGTTCTACGGTTCCAGTTACACAAACAAAGATTGGA TCCAATACGAGCTCATCCCTGTCTTTCATGAAAGGGATTCTGCCGAAATACTTCAGTTCA GAATGGTCTTTTGCTCAGTTCCGTTTACCAGAAATCACGCGGTATATTATGGCATTTGGA GATCAAGACACTGTAATGATGATCGGTCTTGATGGCAGTTTCTACAGATACAGCTTTGAC CCTGTAAATGGCGGGGAGATGATGCTCAAGGAATATCACCTGTTTCTGAAGGCCAGCAAA TCTTTGTGA

Peptide Sequence

PEP ID	Os05t0169200-01
PEP Infomation	pep chromosome:IRGSP-1.0:5:4144983:4148965:1 gene:Os05g0169200 transcript:Os05t0169200-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:AUTOPHAGY ASSOCIATED GENE 18D description:WD40 repeat-like domain containing protein. (Os05t0169200-01)
Sequence	MGHVEEASGSDDDGVELLSVSWNQDNSCFIAATTNGFRVFSCKPFHETMRRMFGPNGGIG IAEMLFRTSIFGLAGAESNTEFPPTMLQLWDDYNERRIHKYNFTSEIRAVRLSKDYFVVV LEKTINVYRFKDLRLFYQARTVSNPNGLCCLSHHANASVFACPGTSKGQVLIEHFGLKET RFIAAHDSPLSCMTMALDGTLLATASVRGTLIRIFNTRDGTCVQEVRRGLDRAEIYSIAL SPNVQWLAVSSDKGTVHVFSLRVKDAEEDAKKGESATAGAQVNDNCNYGSTVPVTQTKIG SNTSSSLSFMKGILPKYFSSEWSFAQFRLPEITRYIMAFGDQDTVMMIGLDGSFYRYSFD PVNGGEMMLKEYHLFLKASKSL

Transcript Sequence

Transcript ID	Os05t0169200-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:5:4144983:4148965:1 gene:Os05g0169200 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:AUTOPHAGY ASSOCIATED GENE 18D description:WD40 repeat-like domain containing protein. (Os05t0169200-01)
Sequence	ATCGCTCGTCATCTAGCGCTCCACCATGGCCGCGACCGCGAGCGCGCCCGCCCAAACTCC CGCTCGCTGCCTCCGCCGATAGCTCGAGCTCCCCGGAACTCCGCCGGCGACCGCGCCGCC GCCCCCGCATTCCCGATCCCACGGCTGCGGGAAAGAGCTAGGTAGGTAGGTAGGTAGGTT CTTGAGGAGCATAATTGTTCGACAGTGCTCAGTTCTTGTGCTCTGAACAAGCCGTTCTAC TCTACTGTTCTAGGAGCGATTGGTTCACTCTGAATTCTGAAAAAAGAAGGGGGCAATTTC TGCTGCCAGAATCTTGGTGATTAACCTCACTTGCGTGCCATAATCTTCAGTCTTTTTCAC CTATGGGCCATGTTGAAGAAGCATCTGGCAGTGATGACGATGGGGTGGAGTTGCTGTCGG TTTCTTGGAACCAGGACAACAGCTGCTTCATTGCAGCAACCACCAATGGCTTCAGGGTCT TCAGTTGCAAGCCCTTCCACGAGACCATGAGGAGGATGTTTGGCCCCAATGGAGGGATTG GAATCGCCGAGATGCTGTTCCGCACCAGCATATTCGGATTGGCAGGTGCAGAGTCCAACA CCGAGTTCCCACCCACCATGCTCCAGCTCTGGGACGATTACAACGAACGCCGCATCCACA AGTACAACTTCACAAGCGAGATCCGAGCCGTCAGGCTGTCCAAGGACTACTTTGTGGTTG TTCTTGAGAAGACCATCAATGTTTACAGGTTCAAGGACCTGAGGCTGTTCTACCAGGCTA GGACGGTGTCGAACCCGAATGGGCTGTGCTGCCTGTCTCATCACGCAAACGCCTCCGTTT TCGCCTGCCCTGGGACGTCCAAGGGGCAGGTTCTCATTGAGCATTTCGGGTTGAAGGAGA CCAGGTTCATTGCTGCTCATGACTCGCCCCTTTCGTGCATGACAATGGCCTTGGATGGAA CACTCTTGGCTACTGCCAGTGTCAGGGGTACTTTGATCAGGATATTCAACACTAGGGACG GCACCTGCGTGCAGGAGGTGCGGAGAGGACTTGACAGAGCTGAGATATATAGCATTGCAC TGTCACCAAATGTGCAGTGGCTAGCAGTCTCCAGTGACAAAGGAACGGTGCATGTCTTCA GTCTGAGGGTGAAAGATGCAGAGGAGGATGCAAAAAAGGGGGAGTCTGCAACTGCAGGTG CACAGGTGAATGACAATTGCAACTATGGTTCTACGGTTCCAGTTACACAAACAAAGATTG GATCCAATACGAGCTCATCCCTGTCTTTCATGAAAGGGATTCTGCCGAAATACTTCAGTT CAGAATGGTCTTTTGCTCAGTTCCGTTTACCAGAAATCACGCGGTATATTATGGCATTTG GAGATCAAGACACTGTAATGATGATCGGTCTTGATGGCAGTTTCTACAGATACAGCTTTG ACCCTGTAAATGGCGGGGAGATGATGCTCAAGGAATATCACCTGTTTCTGAAGGCCAGCA AATCTTTGTGAAGAACTCCAAACACCTGAGCTTCATGGTGGGTCATACCATCATCTCAGT TTATATCTAGATGGTCTGACTAAGTTCAATGCGTACTGTTCTCTCTAGTAACATTTCTCA CTAGCAAGGTTAATCAGCATAGGCTATTTCATTCCGAATTAGGCGTAATTTTTGCACATA TTAGGGGTTAGTCTTTTTTTTGTTGGCTTTTCTACATCAGTAAGCTTAACTGAAATGTAT AAATTTCTTAGGAATGAGTCATTTCCCACCGGATGTGACCTAGTTGTAACTTTAAATTCG TAGTGGAGGGATTTCTCCCTGCCTTCATCTTGTTTTATTAGTTATTTATTACATC