Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os05t0168500-01
CDS Infomation	cds chromosome:IRGSP-1.0:5:4107130:4109864:-1 gene:Os05g0168500 gene_biotype:protein_coding transcript_biotype:protein_coding description:Nonaspanin (TM9SF) family protein. (Os05t0168500-01);Similar to predicted protein. (Os05t0168500-02)
Sequence	ATGCTTGCCAAGATGCAGTCGTGCCGATGGATCTTGGCTTACTTGCTCGTCGTTCTCGTG AGCCTGCACGGTGGTGCCAATGGCTTCTACCTCCCGGGCACATTCATGCACACCTACACC CCAAATGAGGTGATCTCAGCCAAGGTCAACTCGCTCACCTCCATTGAGACTGAGTTGCCC TTCAGCTACTACAGCTTGCCCTACTGTAAGCCCCCGGAAGGCGTCAAGAAGAGCGCCGAG AACCTCGGCGAGATCCTCATGGGTGATCAGATCGACAATTCGCCATACCGGTTCCGAGTC AACGTGAACGAGTCCGTGTACCTATGCACCACGGACCCACTCACCAAGGAGCAGGCCGAG CTGTTGAAGAAGCGGGCGCGAGATCTGTACCAGGTCAACATGATCCTTGACAATCTGCCG GTCATGCGATTCACCGAGCAGAATGGGGTGACTATCCAGTGGACCGGATTCCCGGTCGGG TACAACCCGATGGGGAGTAACGAGGATTACATCATTAACCATCTCAGGTTCAAGGTCTTG GTCCATCAGTACCAGGCGCAGGGTGATGTTGTGATCACCAGTGAGGATGGCGTTGCCATG GTGGAGTCGGATCGCAAGAGCGGATTCCAGATTGTTGGCTTCGAGGTTGTGCCTTGCAGT GTGAGGCGTGATCCTGAGGCGATGTCCAAGCTGAAGATGTATGACAAGGTTGATTCTGTC AAGTGCCCATTGGAGCTTGAGAAATCTCAGGCTATCCGTGAGAACGAGAGGATTACATTC ACCTATGACGTTGAGTATGTTAAGAGCAACATTAAGTGGCCATCAAGGTGGGATGCATAC TTGAAAATGGATGGTGCCAAGGTTCACTGGTTCTCGATCATGAACTCGATGATGGTTGTC TTCTTCTTGGCTGGTATCGTGTTTGTCATATTCTTGAGGACTGTCCGTAGGGATCTGACA CGGTATGAGGAGATGGACAAGGAGGCGCAAGCTCAGATGAATGAGGAGCTCTCAGGATGG AAACTTGTGGTTGGTGATGTCTTCAGAGAGCCTTGCTGCTCAAAGCTGCTATGTGTTATG GTCGCTGATGGTATCCAGATCACTGGTATGGCAGTGGTTACAATTGTCTTTGCTGCTCTG GGTTTCCTCTCACCTGCTTCAAGGGGAATGCTCTTGACCGGAATGATCATCCTGTACCTC TTCCTTGGAATTATCGCTGGATATGTCGGTGTCCGTGTTTGGAGGACAATCAAAGGAACC TCAGAAGGGTGGAAATCTGTTGCTTGGCTGACCTCCTGCTTCTTCCCTGGCATTGTTTTC GTTATCCTGACTGTGCTGAACTCCATCCTGTGGGGCAAGAAGAGCACTGGAGCTTTACCT ATCTCACTGTTTTTCACACTCCTGGCCCTGTGGTTCTGCATCTCAGTTCCACTCACACTT ATTGGAGGTTTGCTGGGTACACGTGCTGCAAGCATAGAGTACCCTGTCCGTACCAACCAA ATTCCACGAGAGATCCCTGAGCGCAAGTTCCCGTCATGGCTGCTTGTTTTGGGTGCTGGA ACATTGCCCTTTGGCACCCTCTTCATTGAGCTTTTCTTCATCCTGTCTAGCATTTGGTTG GGGAGGTTCTACTACGTCTTTGGCTTCCTGTTCATTGTCCTTTTCCTGCTGGTCATAGTC TGTGGTGAGGTTTCTTTAGTCCTAACCTACATGCATCTTTGTGTGGAGGACTGGAAGTGG TGGTGGAAAGCCTTCTTTGCTTCTGGTTCTGTCGCCTTCTACGTCTTCCTATACTCAATC AACTACCTCGTGTTCGACCTTAGGAGCCTAAGTGGACCGGTCTCAGCAACGCTCTACCTT GGCTATTCCCTGATCATGGCCCTTGCCATCATGCTGTCTACTGGTGCTATTGGCTTCTTG CTGTCCTTCTACTTCGTCCATTACCTCTTCTCATCTGTTAAGATTGACTAG

Peptide Sequence

PEP ID	Os05t0168500-01
PEP Infomation	pep chromosome:IRGSP-1.0:5:4107130:4109864:-1 gene:Os05g0168500 transcript:Os05t0168500-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Nonaspanin (TM9SF) family protein. (Os05t0168500-01);Similar to predicted protein. (Os05t0168500-02)
Sequence	MLAKMQSCRWILAYLLVVLVSLHGGANGFYLPGTFMHTYTPNEVISAKVNSLTSIETELP FSYYSLPYCKPPEGVKKSAENLGEILMGDQIDNSPYRFRVNVNESVYLCTTDPLTKEQAE LLKKRARDLYQVNMILDNLPVMRFTEQNGVTIQWTGFPVGYNPMGSNEDYIINHLRFKVL VHQYQAQGDVVITSEDGVAMVESDRKSGFQIVGFEVVPCSVRRDPEAMSKLKMYDKVDSV KCPLELEKSQAIRENERITFTYDVEYVKSNIKWPSRWDAYLKMDGAKVHWFSIMNSMMVV FFLAGIVFVIFLRTVRRDLTRYEEMDKEAQAQMNEELSGWKLVVGDVFREPCCSKLLCVM VADGIQITGMAVVTIVFAALGFLSPASRGMLLTGMIILYLFLGIIAGYVGVRVWRTIKGT SEGWKSVAWLTSCFFPGIVFVILTVLNSILWGKKSTGALPISLFFTLLALWFCISVPLTL IGGLLGTRAASIEYPVRTNQIPREIPERKFPSWLLVLGAGTLPFGTLFIELFFILSSIWL GRFYYVFGFLFIVLFLLVIVCGEVSLVLTYMHLCVEDWKWWWKAFFASGSVAFYVFLYSI NYLVFDLRSLSGPVSATLYLGYSLIMALAIMLSTGAIGFLLSFYFVHYLFSSVKID

Transcript Sequence

Transcript ID	Os05t0168500-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:5:4107130:4109864:-1 gene:Os05g0168500 gene_biotype:protein_coding transcript_biotype:protein_coding description:Nonaspanin (TM9SF) family protein. (Os05t0168500-01);Similar to predicted protein. (Os05t0168500-02)
Sequence	ATCCCCGTCTCCGCGCTCGTCTCGGCTCCTTCTTTGCCCACTTCCTGCCGCCGATTTTGC ATCTCGCGAGCAGAGCAGGGCGCGCGGCTGCTTCCGCCACATCCTGGGGGTGGAATGCTT GCCAAGATGCAGTCGTGCCGATGGATCTTGGCTTACTTGCTCGTCGTTCTCGTGAGCCTG CACGGTGGTGCCAATGGCTTCTACCTCCCGGGCACATTCATGCACACCTACACCCCAAAT GAGGTGATCTCAGCCAAGGTCAACTCGCTCACCTCCATTGAGACTGAGTTGCCCTTCAGC TACTACAGCTTGCCCTACTGTAAGCCCCCGGAAGGCGTCAAGAAGAGCGCCGAGAACCTC GGCGAGATCCTCATGGGTGATCAGATCGACAATTCGCCATACCGGTTCCGAGTCAACGTG AACGAGTCCGTGTACCTATGCACCACGGACCCACTCACCAAGGAGCAGGCCGAGCTGTTG AAGAAGCGGGCGCGAGATCTGTACCAGGTCAACATGATCCTTGACAATCTGCCGGTCATG CGATTCACCGAGCAGAATGGGGTGACTATCCAGTGGACCGGATTCCCGGTCGGGTACAAC CCGATGGGGAGTAACGAGGATTACATCATTAACCATCTCAGGTTCAAGGTCTTGGTCCAT CAGTACCAGGCGCAGGGTGATGTTGTGATCACCAGTGAGGATGGCGTTGCCATGGTGGAG TCGGATCGCAAGAGCGGATTCCAGATTGTTGGCTTCGAGGTTGTGCCTTGCAGTGTGAGG CGTGATCCTGAGGCGATGTCCAAGCTGAAGATGTATGACAAGGTTGATTCTGTCAAGTGC CCATTGGAGCTTGAGAAATCTCAGGCTATCCGTGAGAACGAGAGGATTACATTCACCTAT GACGTTGAGTATGTTAAGAGCAACATTAAGTGGCCATCAAGGTGGGATGCATACTTGAAA ATGGATGGTGCCAAGGTTCACTGGTTCTCGATCATGAACTCGATGATGGTTGTCTTCTTC TTGGCTGGTATCGTGTTTGTCATATTCTTGAGGACTGTCCGTAGGGATCTGACACGGTAT GAGGAGATGGACAAGGAGGCGCAAGCTCAGATGAATGAGGAGCTCTCAGGATGGAAACTT GTGGTTGGTGATGTCTTCAGAGAGCCTTGCTGCTCAAAGCTGCTATGTGTTATGGTCGCT GATGGTATCCAGATCACTGGTATGGCAGTGGTTACAATTGTCTTTGCTGCTCTGGGTTTC CTCTCACCTGCTTCAAGGGGAATGCTCTTGACCGGAATGATCATCCTGTACCTCTTCCTT GGAATTATCGCTGGATATGTCGGTGTCCGTGTTTGGAGGACAATCAAAGGAACCTCAGAA GGGTGGAAATCTGTTGCTTGGCTGACCTCCTGCTTCTTCCCTGGCATTGTTTTCGTTATC CTGACTGTGCTGAACTCCATCCTGTGGGGCAAGAAGAGCACTGGAGCTTTACCTATCTCA CTGTTTTTCACACTCCTGGCCCTGTGGTTCTGCATCTCAGTTCCACTCACACTTATTGGA GGTTTGCTGGGTACACGTGCTGCAAGCATAGAGTACCCTGTCCGTACCAACCAAATTCCA CGAGAGATCCCTGAGCGCAAGTTCCCGTCATGGCTGCTTGTTTTGGGTGCTGGAACATTG CCCTTTGGCACCCTCTTCATTGAGCTTTTCTTCATCCTGTCTAGCATTTGGTTGGGGAGG TTCTACTACGTCTTTGGCTTCCTGTTCATTGTCCTTTTCCTGCTGGTCATAGTCTGTGGT GAGGTTTCTTTAGTCCTAACCTACATGCATCTTTGTGTGGAGGACTGGAAGTGGTGGTGG AAAGCCTTCTTTGCTTCTGGTTCTGTCGCCTTCTACGTCTTCCTATACTCAATCAACTAC CTCGTGTTCGACCTTAGGAGCCTAAGTGGACCGGTCTCAGCAACGCTCTACCTTGGCTAT TCCCTGATCATGGCCCTTGCCATCATGCTGTCTACTGGTGCTATTGGCTTCTTGCTGTCC TTCTACTTCGTCCATTACCTCTTCTCATCTGTTAAGATTGACTAGAGGCACCCACACTCT TGCTGCAATAGGATCACCTGAGCATGGTGATAGTTATCCCTTAGAAACATATCACACAAT AATATTGAATTGAAAAGAAAAATGTAAACATGGCAACGCCCATGGCTTTTGGCCCTGATT AATTCTATCATTTAGCATAGCACAGTTTCTTTAAGTTCATGCTTATGTTTTGTAGGCATG TCTGCAATGTTTCAGCTATGTTTTTTGACTTTGTAATACTATTATGTTTTGTTTTCTCTG GGCATTTGTGAGCAGCCTTTGTTGGAACACTTTGACAGATATTCAATATTAAAGAGCTAT TCGAT