Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os05t0168300-01
CDS Infomation	cds chromosome:IRGSP-1.0:5:4096771:4100732:-1 gene:Os05g0168300 gene_biotype:protein_coding transcript_biotype:protein_coding description:Haloacid dehalogenase-like hydrolase domain containing protein. (Os05t0168300-01)
Sequence	ATGGAGTCGTGTAGCTTCCGCACCGCCGCCTCGCCATCGCCATTCCCCTCGCTTCCCTCC TCCTCCCGACAAGCGCCGCCATGCTCCAGCCTCCGATTCCCCAGACCAAGAAACGGGAGG ATGGTGGGGGTGCGGAGGAGGGCGTCCGGATTCGAGGCCTTCCCTCCCCTACCTGGTAAG GTGTTCGTCGAGGAGGCAATTGGAGCTGAATATGGGGAAGGTTTTGAGACATTTAGGATG GATGGACCACTCAAGGTCGATGTGGATTATCTGAACGAAAAATTGCAAGAATGCTTCCTT CAAAGGATAAGACATGCTATGAAGCCAGATGAAGCATGTGGGCTTATTTTCTCATGGGAC AACGTAATTGCTGATACAGACTCACTAAAGTTGGATGCCTGGAGACAGCTTGCTTTGGAA GAAGGGAAGGATATCCCAAATGCTGGTCATGTCCAAAAGAGTATTCTTCATGGTGCTGCC GACCATGTGCTTAGAAAGGTTTTATGTTGGGCAAAAGATGAAAGTCAAATGGAAAGACTG AAGGCACGGCTTATAGAGTTATACTACGAAAATCTCTTCAAACTTGATACACCAGTAAAT GGATTGCGGGAATGGTTGGATGCTGTCCAGACAGCAGGCATCCCTTGTGCTGTCGCATCG TCCCTGGATAGGAGATGCATGATTGAAGCTTTGGATCGAATGGAACTAAGCAAATACTTC AAGGCAATTGTGACTGACGAGGATGATATGGAGTCAATAGCACATAGGTTCCTCTCAGCT GCTATGAAGCTGGATCGGAAGCCCTCAAAGTGTGTGGTGTTTGAGGATGACCCGAGAGGC GTAACCGCTGCTCACAACTGTACCATGATGGCAGTTGCACTCATTGGTGCTCATCCTGCG TATGAGCTGGTACAGGCTGATCTCGCCATCGCAAAATACAGTGAGCTCTCGGTTATCAAT CTCAGAAGGTTGTTTGCACATAAGGGGTTAAGTTTCATGGACTTGCAGAAGCAGATCATC GAGAGGTCACCTCCCAAGAGGAAGCTGACAGTAGACACCATCTTCTAA

Peptide Sequence

PEP ID	Os05t0168300-01
PEP Infomation	pep chromosome:IRGSP-1.0:5:4096771:4100732:-1 gene:Os05g0168300 transcript:Os05t0168300-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Haloacid dehalogenase-like hydrolase domain containing protein. (Os05t0168300-01)
Sequence	MESCSFRTAASPSPFPSLPSSSRQAPPCSSLRFPRPRNGRMVGVRRRASGFEAFPPLPGK VFVEEAIGAEYGEGFETFRMDGPLKVDVDYLNEKLQECFLQRIRHAMKPDEACGLIFSWD NVIADTDSLKLDAWRQLALEEGKDIPNAGHVQKSILHGAADHVLRKVLCWAKDESQMERL KARLIELYYENLFKLDTPVNGLREWLDAVQTAGIPCAVASSLDRRCMIEALDRMELSKYF KAIVTDEDDMESIAHRFLSAAMKLDRKPSKCVVFEDDPRGVTAAHNCTMMAVALIGAHPA YELVQADLAIAKYSELSVINLRRLFAHKGLSFMDLQKQIIERSPPKRKLTVDTIF

Transcript Sequence

Transcript ID	Os05t0168300-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:5:4096771:4100732:-1 gene:Os05g0168300 gene_biotype:protein_coding transcript_biotype:protein_coding description:Haloacid dehalogenase-like hydrolase domain containing protein. (Os05t0168300-01)
Sequence	CTTTCCCCTTCTCATGGAGTCGTGTAGCTTCCGCACCGCCGCCTCGCCATCGCCATTCCC CTCGCTTCCCTCCTCCTCCCGACAAGCGCCGCCATGCTCCAGCCTCCGATTCCCCAGACC AAGAAACGGGAGGATGGTGGGGGTGCGGAGGAGGGCGTCCGGATTCGAGGCCTTCCCTCC CCTACCTGGTAAGGTGTTCGTCGAGGAGGCAATTGGAGCTGAATATGGGGAAGGTTTTGA GACATTTAGGATGGATGGACCACTCAAGGTCGATGTGGATTATCTGAACGAAAAATTGCA AGAATGCTTCCTTCAAAGGATAAGACATGCTATGAAGCCAGATGAAGCATGTGGGCTTAT TTTCTCATGGGACAACGTAATTGCTGATACAGACTCACTAAAGTTGGATGCCTGGAGACA GCTTGCTTTGGAAGAAGGGAAGGATATCCCAAATGCTGGTCATGTCCAAAAGAGTATTCT TCATGGTGCTGCCGACCATGTGCTTAGAAAGGTTTTATGTTGGGCAAAAGATGAAAGTCA AATGGAAAGACTGAAGGCACGGCTTATAGAGTTATACTACGAAAATCTCTTCAAACTTGA TACACCAGTAAATGGATTGCGGGAATGGTTGGATGCTGTCCAGACAGCAGGCATCCCTTG TGCTGTCGCATCGTCCCTGGATAGGAGATGCATGATTGAAGCTTTGGATCGAATGGAACT AAGCAAATACTTCAAGGCAATTGTGACTGACGAGGATGATATGGAGTCAATAGCACATAG GTTCCTCTCAGCTGCTATGAAGCTGGATCGGAAGCCCTCAAAGTGTGTGGTGTTTGAGGA TGACCCGAGAGGCGTAACCGCTGCTCACAACTGTACCATGATGGCAGTTGCACTCATTGG TGCTCATCCTGCGTATGAGCTGGTACAGGCTGATCTCGCCATCGCAAAATACAGTGAGCT CTCGGTTATCAATCTCAGAAGGTTGTTTGCACATAAGGGGTTAAGTTTCATGGACTTGCA GAAGCAGATCATCGAGAGGTCACCTCCCAAGAGGAAGCTGACAGTAGACACCATCTTCTA ATGAATTCTTTACCTCCCAATACTGAAAAAGAGAGAAAAGAAAATAGCACCATGCATCCT CCCTACTGTGCTGTGTATATAGCATTCCATGTTGGTTAGATTACATAGAAAGCTGATGTT AGATGATCTGTTGTTGCATACCTCCATTCTGGATGTACTAGATGTAAACTGATGTTTAAC CATTTTAATCATGATAAATACTACCAGTCTACC