Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os05t0166300-01
CDS Infomation	cds chromosome:IRGSP-1.0:5:3956610:3959179:-1 gene:Os05g0166300 gene_biotype:protein_coding transcript_biotype:protein_coding description:Serine/threonine protein kinase-related domain containing protein. (Os05t0166300-01)
Sequence	ATGATTCCCCAGCTTTACATATTTCTTGGCCTCCTCCTCTTCTCCCTGCACGGTGCTCCA CCATACTCCGCCGCCGCCGTGAATGATACTCTCCTGGCAGGCGAATCGATCGCCGTCAGC GACAAGCTCATGTCAAGAAATGGCAAGTTCACGCTCGGCTTCTTCCAGCCAAGCGTTGTC AGTAAGTCCGGTAACATCACCTCTCCCAATTGGTACGTTGGCATATGGTTCAGTAACATC TCGGAATTTACTACTGTCTGGGTTGCTAATAGAGATAATCCAGTCACTGACCTCCAGCTC AACCAGACACGGCTAAAACTATCAAACGATGGCAATCTTGTCATCTCAAGCAATGCCTCC ACAATTTGGTCCAGTGCTACTGTTGCCAATACGACAATAGCCACCACCATGAATACTACT AGTGTCGTTCTCGCTAACAATGGCAACCTTATGATAATAGGAAGCTCATCGACATCAAAT GTGTCGTGGCAGAGCTTCGAACACCCAGCAGATGTTATGCTTCCTGGAGCCAAGTTTGGT TGGAACAAGGCCACTGGTGCCACTATCAAGTATTTCTCAAAGAAGAACCTGATTGACCCT GGTCTTGGCTTGTACTATTTTCAGCTTGACAACACAGGGATTGTCCTTGCCCGTAGTAAC CCTGCTAAAACGTATTGGTCTTGGTCATCACAACAGTCATCAAAGGCTATATCATTGCTT AATCAGCTGATGAGCATAAATCCACAGACTAGAGGTCGGATTAACATGACATATGTCGAT AACAATGAAGAAGAGTACTATGCATACATTTTGTTAGATGAATCATTAAACGTATACGGC GTGCTAGACATCTCTGGTCAGCTTATCATAAATGTTTGGTCGCAAGACACACGGTCTTGG CAACAGGTATACACCCAACCTATTTCCCCCTGCACGGCATACGCTACATGTGGACCTTTC ACAATCTGCAATAGCCTTGCACATCCTGTCTGTAACTGTATGGAGAGCTTCTCTCAAACG TCACCTGAAGATTGGGAGGTTGGCAATAGAACAGTAGGGTGCTCCAGAAACACTCCGTTG GATTGCGGTAACATGACAAGTTCAACGGACGTGTTCCAAGCCATAGCTCGCGTTCAATTG CCCTCCAACACACCACAAAGAGTAGATAATGCCACCACTCAGAGCAAATGTGCACAAGCA TGTCTTAGTTACTGCTCCTGCAATGCATATTCCTATGAAAATAACATATGCTCTATTTGG CATGGAGATTTACTTAGTGTAAATAGTAATGATGGCATTGATAATAGTTCCGAAGAAGTT CTATACCTTCGCCTTTCCGCTAAAGATGTGCCAAGTTCGAGAAAAAACAATAGAAAGACA ATCGTTGGAGTTATTATTGCGACATGCATTGCTTCTTTTCTGGTAATGCTCATGCTGATC TTACTGATATTGAGGAAGAAATGTTTACATACCAGTCAATTGGTTGGTGGAATTGTGGCC TTTAGATACAGTGATTTATGTCATGGTACTAAAAATTTCTCTGAAAAGCTTGGAGGAGGT GGTTTTGGTTCTGTATCCAAGGGAGTGCTAAGTGACTCCACTATTATAGCAGTGAAAAAG CTTGACGGTGCTCATCAGGGAGAGAAGCAGTTCAGGGCTGAGGTGAGCTCAATTGGATTG ATCCAACATATTAACCTTGTCAAATTGATTGGTTTCTGTTGCGAAGGTGATAAGAGGCTA CTTGTTTATGAACACATGGTAAATGGTTCTCTTGATGCCCATCTATTTCAGAGCAAGGCT ACTATCCTGAATTGGACCACCAGGTACAACCTAGCCATAGGAGTTGCTAGAGGATTGTCC TACTTGCATCAGAGCTGCAAAGAATGCATCATACATTGTGACATTAAGCCAGAAAACATA CTTCTCGATGCATCATTTACTCCTAAAATTGCCGACTTTGGGATGGCGGCATTTGTAGGA AGGAATTTTAGCCGAGTTCTAACTACGTTCAGAGGAACCGTAGGGTATCTTGCCCCGGAG TGGATTAGCGGAGTCGCTATTACACCAAAAGTTGATGTTTATAGTTTCGGCATGGTACTG TTAGAAATGTTATCGGGAAAAAGGAATTCACAAAAAGTATGTATTGATGACAACAGTAAT CAGGTTGCCCCTTTCCCTGTGACGGCCATTAGCAAGCTTCTTGAGGGAGATGTCCGGAGT TTGGTAGACCCAAAGTTAAATGGTGACTTCAGTCTAGAAGAGGCTGAAAGACTTTGCAAA GTTGCATATTGGTGTATCCAAGATAATGAGGTCGATCGGCCAACAATGAGTGAAGTGGTT CTGGTTCTTGAGGGACTACATAATCTTGATATGCCTCCAATGCCAAGACTACTTGCTGCT TTAGCATTATGA

Peptide Sequence

PEP ID	Os05t0166300-01
PEP Infomation	pep chromosome:IRGSP-1.0:5:3956610:3959179:-1 gene:Os05g0166300 transcript:Os05t0166300-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Serine/threonine protein kinase-related domain containing protein. (Os05t0166300-01)
Sequence	MIPQLYIFLGLLLFSLHGAPPYSAAAVNDTLLAGESIAVSDKLMSRNGKFTLGFFQPSVV SKSGNITSPNWYVGIWFSNISEFTTVWVANRDNPVTDLQLNQTRLKLSNDGNLVISSNAS TIWSSATVANTTIATTMNTTSVVLANNGNLMIIGSSSTSNVSWQSFEHPADVMLPGAKFG WNKATGATIKYFSKKNLIDPGLGLYYFQLDNTGIVLARSNPAKTYWSWSSQQSSKAISLL NQLMSINPQTRGRINMTYVDNNEEEYYAYILLDESLNVYGVLDISGQLIINVWSQDTRSW QQVYTQPISPCTAYATCGPFTICNSLAHPVCNCMESFSQTSPEDWEVGNRTVGCSRNTPL DCGNMTSSTDVFQAIARVQLPSNTPQRVDNATTQSKCAQACLSYCSCNAYSYENNICSIW HGDLLSVNSNDGIDNSSEEVLYLRLSAKDVPSSRKNNRKTIVGVIIATCIASFLVMLMLI LLILRKKCLHTSQLVGGIVAFRYSDLCHGTKNFSEKLGGGGFGSVSKGVLSDSTIIAVKK LDGAHQGEKQFRAEVSSIGLIQHINLVKLIGFCCEGDKRLLVYEHMVNGSLDAHLFQSKA TILNWTTRYNLAIGVARGLSYLHQSCKECIIHCDIKPENILLDASFTPKIADFGMAAFVG RNFSRVLTTFRGTVGYLAPEWISGVAITPKVDVYSFGMVLLEMLSGKRNSQKVCIDDNSN QVAPFPVTAISKLLEGDVRSLVDPKLNGDFSLEEAERLCKVAYWCIQDNEVDRPTMSEVV LVLEGLHNLDMPPMPRLLAALAL

Transcript Sequence

Transcript ID	Os05t0166300-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:5:3956610:3959179:-1 gene:Os05g0166300 gene_biotype:protein_coding transcript_biotype:protein_coding description:Serine/threonine protein kinase-related domain containing protein. (Os05t0166300-01)
Sequence	GCAGCACACAACACATCTGTATACTTCTTCTCTACTTTCTCCGTTCCAATTACTTCACCA TGATTCCCCAGCTTTACATATTTCTTGGCCTCCTCCTCTTCTCCCTGCACGGTGCTCCAC CATACTCCGCCGCCGCCGTGAATGATACTCTCCTGGCAGGCGAATCGATCGCCGTCAGCG ACAAGCTCATGTCAAGAAATGGCAAGTTCACGCTCGGCTTCTTCCAGCCAAGCGTTGTCA GTAAGTCCGGTAACATCACCTCTCCCAATTGGTACGTTGGCATATGGTTCAGTAACATCT CGGAATTTACTACTGTCTGGGTTGCTAATAGAGATAATCCAGTCACTGACCTCCAGCTCA ACCAGACACGGCTAAAACTATCAAACGATGGCAATCTTGTCATCTCAAGCAATGCCTCCA CAATTTGGTCCAGTGCTACTGTTGCCAATACGACAATAGCCACCACCATGAATACTACTA GTGTCGTTCTCGCTAACAATGGCAACCTTATGATAATAGGAAGCTCATCGACATCAAATG TGTCGTGGCAGAGCTTCGAACACCCAGCAGATGTTATGCTTCCTGGAGCCAAGTTTGGTT GGAACAAGGCCACTGGTGCCACTATCAAGTATTTCTCAAAGAAGAACCTGATTGACCCTG GTCTTGGCTTGTACTATTTTCAGCTTGACAACACAGGGATTGTCCTTGCCCGTAGTAACC CTGCTAAAACGTATTGGTCTTGGTCATCACAACAGTCATCAAAGGCTATATCATTGCTTA ATCAGCTGATGAGCATAAATCCACAGACTAGAGGTCGGATTAACATGACATATGTCGATA ACAATGAAGAAGAGTACTATGCATACATTTTGTTAGATGAATCATTAAACGTATACGGCG TGCTAGACATCTCTGGTCAGCTTATCATAAATGTTTGGTCGCAAGACACACGGTCTTGGC AACAGGTATACACCCAACCTATTTCCCCCTGCACGGCATACGCTACATGTGGACCTTTCA CAATCTGCAATAGCCTTGCACATCCTGTCTGTAACTGTATGGAGAGCTTCTCTCAAACGT CACCTGAAGATTGGGAGGTTGGCAATAGAACAGTAGGGTGCTCCAGAAACACTCCGTTGG ATTGCGGTAACATGACAAGTTCAACGGACGTGTTCCAAGCCATAGCTCGCGTTCAATTGC CCTCCAACACACCACAAAGAGTAGATAATGCCACCACTCAGAGCAAATGTGCACAAGCAT GTCTTAGTTACTGCTCCTGCAATGCATATTCCTATGAAAATAACATATGCTCTATTTGGC ATGGAGATTTACTTAGTGTAAATAGTAATGATGGCATTGATAATAGTTCCGAAGAAGTTC TATACCTTCGCCTTTCCGCTAAAGATGTGCCAAGTTCGAGAAAAAACAATAGAAAGACAA TCGTTGGAGTTATTATTGCGACATGCATTGCTTCTTTTCTGGTAATGCTCATGCTGATCT TACTGATATTGAGGAAGAAATGTTTACATACCAGTCAATTGGTTGGTGGAATTGTGGCCT TTAGATACAGTGATTTATGTCATGGTACTAAAAATTTCTCTGAAAAGCTTGGAGGAGGTG GTTTTGGTTCTGTATCCAAGGGAGTGCTAAGTGACTCCACTATTATAGCAGTGAAAAAGC TTGACGGTGCTCATCAGGGAGAGAAGCAGTTCAGGGCTGAGGTGAGCTCAATTGGATTGA TCCAACATATTAACCTTGTCAAATTGATTGGTTTCTGTTGCGAAGGTGATAAGAGGCTAC TTGTTTATGAACACATGGTAAATGGTTCTCTTGATGCCCATCTATTTCAGAGCAAGGCTA CTATCCTGAATTGGACCACCAGGTACAACCTAGCCATAGGAGTTGCTAGAGGATTGTCCT ACTTGCATCAGAGCTGCAAAGAATGCATCATACATTGTGACATTAAGCCAGAAAACATAC TTCTCGATGCATCATTTACTCCTAAAATTGCCGACTTTGGGATGGCGGCATTTGTAGGAA GGAATTTTAGCCGAGTTCTAACTACGTTCAGAGGAACCGTAGGGTATCTTGCCCCGGAGT GGATTAGCGGAGTCGCTATTACACCAAAAGTTGATGTTTATAGTTTCGGCATGGTACTGT TAGAAATGTTATCGGGAAAAAGGAATTCACAAAAAGTATGTATTGATGACAACAGTAATC AGGTTGCCCCTTTCCCTGTGACGGCCATTAGCAAGCTTCTTGAGGGAGATGTCCGGAGTT TGGTAGACCCAAAGTTAAATGGTGACTTCAGTCTAGAAGAGGCTGAAAGACTTTGCAAAG TTGCATATTGGTGTATCCAAGATAATGAGGTCGATCGGCCAACAATGAGTGAAGTGGTTC TGGTTCTTGAGGGACTACATAATCTTGATATGCCTCCAATGCCAAGACTACTTGCTGCTT TAGCATTATGATCTGATGTGGATCATTGTGATAGTTCATAAATAAATACTTCGTAGCTTT TTGAAGTTCTAACGTACGTGATGGAAGGAAAGTAATGTAAACTTGATTGC